Inferring the hosts of coronavirus using dual statistical models based on nucleotide composition (Q36320909)

13 August 2017

Inferring the hosts of coronavirus using dual statistical models based on nucleotide composition (English)

1 reference

13 August 2017

1 reference

Qin Tang

1

1 reference

13 August 2017

Yulong Song

2

1 reference

13 August 2017

Mijuan Shi

3

1 reference

13 August 2017

Yingyin Cheng

4

1 reference

13 August 2017

Wanting Zhang

5

1 reference

13 August 2017

Xiao-Qin Xia

6

1 reference

13 August 2017

language of work or name

English

0 references

publication date

26 November 2015

1 reference

13 August 2017

1 reference

13 August 2017

5

1 reference

13 August 2017

17155

1 reference

Creative Commons Attribution 4.0 International

13 August 2017

start time

26 November 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1038/srep17155

0 references

cites work

A decade after SARS: strategies for controlling emerging coronaviruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Isolation and characterization of a bat SARS-like coronavirus that uses the ACE2 receptor

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Virus-specific factors associated with zoonotic and pandemic potential.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Receptor recognition and cross-species infections of SARS coronavirus

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Structure of MERS-CoV spike receptor-binding domain complexed with human receptor DPP4

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Interspecies transmission and emergence of novel viruses: lessons from bats and birds

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Genomic characterization of a newly discovered coronavirus associated with acute respiratory distress syndrome in humans

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Adaptive mutations in NEP compensate for defective H5N1 RNA replication in cultured human cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Discovery of seven novel Mammalian and avian coronaviruses in the genus deltacoronavirus supports bat coronaviruses as the gene source of alphacoronavirus and betacoronavirus and avian coronaviruses

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Coronavirus genomics and bioinformatics analysis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Use of nucleotide composition analysis to infer hosts for three novel picorna-like viruses

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Virus-host coevolution: common patterns of nucleotide motif usage in Flaviviridae and their hosts

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Coronaviruses post-SARS: update on replication and pathogenesis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Different evolutionary trajectories of European avian-like and classical swine H1N1 influenza A viruses.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Patterns of evolution and host gene mimicry in influenza and other RNA viruses

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Natural mutations in the receptor binding domain of spike glycoprotein determine the reactivity of cross-neutralization between palm civet coronavirus and severe acute respiratory syndrome coronavirus

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Genomic signatures of human versus avian influenza A viruses

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Structure of SARS coronavirus spike receptor-binding domain complexed with receptor

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

SARS-associated coronavirus transmitted from human to pig

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Cross-host evolution of severe acute respiratory syndrome coronavirus in palm civet and human

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Complete genomic sequence of human coronavirus OC43: molecular clock analysis suggests a relatively recent zoonotic coronavirus transmission event

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Codon and amino acid usage in retroviral genomes is consistent with virus-specific nucleotide pressure

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Evolution of base composition and codon usage bias in the genus Flavivirus

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Support vector machine classification and validation of cancer tissue samples using microarray expression data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Mutation rates among RNA viruses

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Compositional differences within and between eukaryotic genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Over- and under-representation of short oligonucleotides in DNA sequences

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Convergent host-parasite codon usage between honeybee and bee associated viral genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Analysis of the genome sequence of an alpaca coronavirus

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Analysis of synonymous codon usage in SARS Coronavirus and other viruses in the Nidovirales.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4660426

Evolutionary Basis of Codon Usage and Nucleotide Composition Bias in Vertebrate DNA Viruses

22 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FSREP17155

21 January 2018

The Mahalanobis distance

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FSREP17155

Dinucleotide and stop codon frequencies in single-stranded RNA viruses

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26607834

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/SREP17155

1 reference

Dimensions Publication ID

13 August 2017

1037865088

0 references

Fatcat ID

release_ght6fhwzdrd4bjurrtqocq3wzm

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/ght6fhwzdrd4bjurrtqocq3wzm

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

13 August 2017

1 reference