Medium term water deficit elicits distinct transcriptome responses in Eucalyptus species of contrasting environmental origin. (Q36340110)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28388878%20AND%20SRC:MED&resulttype=core&format=json

17 March 2020

title

Medium term water deficit elicits distinct transcriptome responses in Eucalyptus species of contrasting environmental origin (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28388878%20AND%20SRC:MED&resulttype=core&format=json

17 March 2020

0 references

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28388878%20AND%20SRC:MED&resulttype=core&format=json

17 March 2020

Andrew Merchant

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28388878%20AND%20SRC:MED&resulttype=core&format=json

17 March 2020

author name string

Antanas V Spokevicius

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28388878%20AND%20SRC:MED&resulttype=core&format=json

17 March 2020

Josquin Tibbits

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28388878%20AND%20SRC:MED&resulttype=core&format=json

17 March 2020

Philippe Rigault

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28388878%20AND%20SRC:MED&resulttype=core&format=json

17 March 2020

Marc-Alexandre Nolin

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28388878%20AND%20SRC:MED&resulttype=core&format=json

17 March 2020

language of work or name

English

0 references

publication date

7 April 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28388878%20AND%20SRC:MED&resulttype=core&format=json

17 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28388878%20AND%20SRC:MED&resulttype=core&format=json

17 March 2020

volume

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28388878%20AND%20SRC:MED&resulttype=core&format=json

17 March 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28388878%20AND%20SRC:MED&resulttype=core&format=json

17 March 2020

page(s)

284

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28388878%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

17 March 2020

Cytoscape

object named as

Cytoscape

2 references

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

edgeR

object named as

edgeR package

edgeR

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

edgeR

0 references

cites work

The genome of Eucalyptus grandis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Count-based differential expression analysis of RNA sequencing data using R and Bioconductor

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

PANTHER in 2013: modeling the evolution of gene function, and other gene attributes, in the context of phylogenetic trees

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

RNA-Seq reveals genotype-specific molecular responses to water deficit in eucalyptus

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

New Insights into the Shikimate and Aromatic Amino Acids Biosynthesis Pathways in Plants

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

agriGO: a GO analysis toolkit for the agricultural community

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Integrated omics approaches in plant systems biology

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Plant systems biology comes of age.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Quercitol and osmotic adaptation of field-grown Eucalyptus under seasonal drought stress.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Carbon metabolite sensing and signalling.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Cyclitols and carbohydrates in leaves and roots of 13 Eucalyptus species suggest contrasting physiological responses to water deficit

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Leaf and wood carbon isotope ratios, specific leaf areas and wood growth of Eucalyptus species across a rainfall gradient in Australia

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Does rainfall explain variation in leaf morphology and physiology among populations of red ironbark (Eucalyptus sideroxylon subsp. tricarpa) grown in a common garden?

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Systems biology, integrative biology, predictive biology

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Sucrose metabolism: regulatory mechanisms and pivotal roles in sugar sensing and plant development

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Leaf water relations and stomatal behavior of four allopatric Eucalyptus species planted in Mediterranean southwestern Australia

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Induction of Zygotic Polyembryos in Wheat: Influence of Auxin Polar Transport

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Enhancing photosynthesis with sugar signals

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

miRNA-Seq normalization comparisons need improvement

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Phloem loading. A reevaluation of the relationship between plasmodesmatal frequencies and loading strategies

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

The molecular basis of quantitative variation in foliar secondary metabolites in Eucalyptus globulus

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Relations of sugar composition and delta 13C in phloem sap to growth and physiological performance of Eucalyptus globulus (Labill).

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Contrasting physiological responses of six eucalyptus species to water deficit.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Targeted metabolite profiling provides a functional link among eucalypt taxonomy, physiology and evolution

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Leaf water relations of Eucalyptus cloeziana and Eucalyptus argophloia in response to water deficit.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5383985

Salt tolerance in Eucalyptus spp.: identity and response of putative osmolytes

22 September 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3664-Z

Compound-specific differences in 13C of soluble carbohydrates in leaves and phloem of 6-month-old Eucalyptus globulus (Labill)

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3664-Z

A P450-centric view of plant evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3664-Z

The apparent feed-forward response to vapour pressure deficit of stomata in droughted, field-grown Eucalyptus globulus Labill

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3664-Z

Effect of limited water availability on foliar plant secondary metabolites of two Eucalyptus species

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3664-Z

Quercitol links the physiology, taxonomy and evolution of 279 eucalypt species

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3664-Z

Spatial and temporal variations in phloem sap composition of plantation-grown Eucalyptus globulus

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3664-Z

Qualitative and Semi-quantitative Analysis of Phenolics inEucalyptus globulusLeaves by High-performance Liquid Chromatography Coupled with Diode Array Detection and Electrospray Ionisation Mass Spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12864-017-3664-Z

10.1186/S12864-017-3664-Z

21 January 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28388878%20AND%20SRC:MED&resulttype=core&format=json

17 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28388878%20AND%20SRC:MED&resulttype=core&format=json

17 March 2020

PubMed publication ID

28388878

1 reference