A complex history of rearrangement in an orthologous region of the maize, sorghum, and rice genomes (Q36349471)

13 August 2017

A complex history of rearrangement in an orthologous region of the maize, sorghum, and rice genomes (English)

1 reference

13 August 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A14530400

18 March 2024

plant genome

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A14530400

18 March 2024

3

Jeffrey L Bennetzen

1 reference

13 August 2017

2

Phillip J SanMiguel

1 reference

13 August 2017

Katica Ilic

1

1 reference

PMCID

218747

13 August 2017

language of work or name

English

0 references

publication date

6 October 2003

1 reference

PMCID

218747

full work available at URL

13 August 2017

https://europepmc.org/articles/pmc218747?pdf=render

file format

Portable Document Format

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A14530400

https://europepmc.org/articles/PMC218747

18 March 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A14530400

https://europepmc.org/articles/PMC218747?pdf=render

18 March 2024

file format

Portable Document Format

online access status

open access

content deliverer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A14530400

https://doi.org/10.1073/pnas.1434476100

18 March 2024

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A14530400

https://pnas.org/doi/pdf/10.1073/pnas.1434476100

18 March 2024

1 reference

DOI

10.1073/PNAS.1434476100

https://api.crossref.org/works/10.1073/PNAS.1434476100

Proceedings of the National Academy of Sciences of the United States of America

18 March 2024

published in

1 reference

13 August 2017

100

1 reference

13 August 2017

21

1 reference

13 August 2017

12265-12270

1 reference

Identification of the genomic locations of duplicate nucleotide sequences in maize by analysis of restriction fragment length polymorphisms.

13 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

The genetic colinearity of rice and other cereals on the basis of genomic sequence analysis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

Different types and rates of genome evolution detected by comparative sequence analysis of orthologous segments from four cereal genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

Mosaic organization of orthologous sequences in grass genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

Comparative genomics in the grass family: molecular characterization of grass genome structure and evolution

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

Intraspecific violation of genetic colinearity and its implications in maize

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheat

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

DNA sequence evidence for the segmental allotetraploid origin of maize

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

International Rice Genome Sequencing Project: the effort to completely sequence the rice genome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

The probability of duplicate gene preservation by subfunctionalization

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

Inferences on the genome structure of progenitor maize through comparative analysis of rice, maize and the domesticated panicoids

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

High gene density is conserved at syntenic loci of small and large grass genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

Colinearity and its exceptions in orthologous adh regions of maize and sorghum

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

Plant comparative genetics after 10 years

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

Microcolinearity in sh2-homologous regions of the maize, rice, and sorghum genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

Grasses as a single genetic system: genome composition, collinearity and compatibility

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

Comparative linkage maps of the rice and maize genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

Rapid genome change in synthetic polyploids of Brassica and its implications for polyploid evolution

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

Cereal Genome Evolution: Grasses, line up and form a circle

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

Date of the monocot-dicot divergence estimated from chloroplast DNA sequence data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

Genetic mapping and characterization of sorghum and related crops by means of maize DNA probes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

The complete sequence of 340 kb of DNA around the rice Adh1-adh2 region reveals interrupted colinearity with maize chromosome 4.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

Rapid elimination of low-copy DNA sequences in polyploid wheat: a possible mechanism for differentiation of homoeologous chromosomes

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=218747

A Phylogeny of the Grass Family (Poaceae) Based on ndhF Sequence Data

29 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1434476100

Comparative sequence analysis of colinear barley and rice bacterial artificial chromosomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1434476100

Numerous small rearrangements of gene content, order and orientation differentiate grass genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1434476100

The genome sequence and structure of rice chromosome 1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1434476100

The Part Played by Recurrent Mutation in Evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1434476100

A simple method for estimating the intensity of purifying selection in protein-coding genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1434476100

Nuclear DNA Amounts in Angiosperms

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1434476100

Homoeologous relationships of rice, wheat and maize chromosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1434476100

Transposable elements, genes and recombination in a 215-kb contig from wheat chromosome 5A(m)

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1434476100

Rapid genomic changes in newly synthesized amphiploids of Triticum and Aegilops. II. Changes in low-copy coding DNA sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1434476100

21 January 2018

Identifiers

DOI

10.1073/PNAS.1434476100

1 reference

13 August 2017

0 references

1 reference

13 August 2017

1 reference

PMCID

218747