Protein folding in confined and crowded environments (Q36420768)

14 August 2017

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title

Protein folding in confined and crowded environments (English)

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14 August 2017

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Huan-Xiang Zhou

1

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PMCID

2223181

14 August 2017

language of work or name

English

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publication date

1 August 2007

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Archives of Biochemistry and Biophysics

14 August 2017

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14 August 2017

469

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14 August 2017

76-82

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14 August 2017

1

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Protein folding under confinement: a role for solvent

14 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

From the test tube to the cell: exploring the folding and aggregation of a beta-clam protein

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Protein misassembly: macromolecular crowding and molecular chaperones

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Dynamics of unfolded polypeptide chains in crowded environment studied by fluorescence correlation spectroscopy.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Fast local backbone dynamics of encapsulated ubiquitin.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

How can biochemical reactions within cells differ from those in test tubes?

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Protein aggregation in crowded environments.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Ribosome exit tunnel can entropically stabilize alpha-helices

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

New reverse micelle surfactant systems optimized for high-resolution NMR spectroscopy of encapsulated proteins.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Unfolding of Green Fluorescent Protein mut2 in wet nanoporous silica gels.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Models for excluded volume interaction between an unfolded protein and rigid macromolecular cosolutes: macromolecular crowding and protein stability revisited.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Direct access to the cooperative substructure of proteins and the protein ensemble via cold denaturation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Polymer models of protein stability, folding, and interactions.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Cooperativity in two-state protein folding kinetics.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Loops, linkages, rings, catenanes, cages, and crowders: entropy-based strategies for stabilizing proteins.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Protein folding by the effects of macromolecular crowding

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

How the folding rate constant of simple, single-domain proteins depends on the number of native contacts

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Organellar relationships in the Golgi region of the pancreatic beta cell line, HIT-T15, visualized by high resolution electron tomography

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Contact order, transition state placement and the refolding rates of single domain proteins.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Diffusion-limited contact formation in unfolded cytochrome c: estimating the maximum rate of protein folding

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Helix formation inside a nanotube: possible influence of backbone-water hydrogen bonding by the confining surface through modulation of water activity

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Structural features of the GroEL-GroES nano-cage required for rapid folding of encapsulated protein.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Self-avoiding flexible polymers under spherical confinement.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Nanotube confinement denatures protein helices.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Macromolecular crowding in the Escherichia coli periplasm maintains alpha-synuclein disorder.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Folding zones inside the ribosomal exit tunnel

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Effects of pH, salt, and macromolecular crowding on the stability of FK506-binding protein: an integrated experimental and theoretical study

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

A new method for purification of recombinant human alpha-synuclein in Escherichia coli.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Efficacy of macromolecular crowding in forcing proteins to fold

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

A Simple Semiempirical Model for the Effect of Molecular Confinement upon the Rate of Protein Folding

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223181

Protein folding and binding in confined spaces and in crowded solutions

5 December 2018

1 reference

12 December 2020

15N NMR spin relaxation dispersion study of the molecular crowding effects on protein folding under native conditions

1 reference

12 December 2020

Polymers interacting with spherical and rodlike particles

1 reference

12 December 2020

Polymer depletion effects near mesoscopic particles

1 reference

12 December 2020

NMR spectroscopy can characterize proteins encapsulated in a sol-gel matrix

1 reference

12 December 2020

Protein encapsulation in mesoporous silicate: the effects of confinement on protein stability, hydration, and volumetric properties

1 reference

12 December 2020

Protein stability in nanocages: a novel approach for influencing protein stability by molecular confinement

1 reference

12 December 2020

Stabilization of Proteins in Confined Spaces†

1 reference

12 December 2020

Macromolecular crowding stabilizes the molten globule form of apomyoglobin with respect to both cold and heat unfolding

1 reference

12 December 2020

Depletion effects and loop formation in self-avoiding polymers

1 reference

12 December 2020

Macromolecular crowding

1 reference

12 December 2020

Forced folding and structural analysis of metastable proteins

1 reference

12 December 2020

Diffusion-controlled reactions with mobile traps

1 reference

12 December 2020

Tuning the cooperativity of the helix-coil transition by aqueous reverse micelles

1 reference

12 December 2020

10.1016/J.ABB.2007.07.013

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