Solvent exposure associated with single abasic sites alters the base sequence dependence of oxidation of guanine in DNA in GG sequence contexts (Q36453093)

From Wikidata

Jump to navigation Jump to search

scientific article

Language	Label	Description	Also known as
English	Solvent exposure associated with single abasic sites alters the base sequence dependence of oxidation of guanine in DNA in GG sequence contexts	scientific article

Statements

scholarly article

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Solvent exposure associated with single abasic sites alters the base sequence dependence of oxidation of guanine in DNA in GG sequence contexts (English)

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Vladimir Shafirovich

5

object named as

Vladimir Shafirovich

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

object named as

Peter C Dedon

3

0 references

author name string

Young-Ae Lee

1

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Zhi Liu

2

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Nicholas E Geacintov

4

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

publication date

7 June 2011

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

12

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

11

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

1731-1739

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Oxidation of guanine by carbonate radicals derived from photolysis of carbonatotetramminecobalt(III) complexes and the pH dependence of intrastrand DNA cross-links mediated by guanine radical reactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Oxidation of guanine in G, GG, and GGG sequence contexts by aromatic pyrenyl radical cations and carbonate radical anions: relationship between kinetics and distribution of alkali-labile lesions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Photosensitized oxidative DNA damage: from hole injection to chemical product formation and strand cleavage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Base-excision repair of oxidative DNA damage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Mechanisms of oxidation of guanine in DNA by carbonate radical anion, a decomposition product of nitrosoperoxycarbonate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Nitric oxide and peroxynitrite in health and disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Mechanisms of formation, genotoxicity, and mutation of guanine oxidation products

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Combination of nitrogen dioxide radicals with 8-oxo-7,8-dihydroguanine and guanine radicals in DNA: oxidation and nitration end-products

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Origin of the heterogeneous distribution of the yield of guanyl radical in UV laser photolyzed DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Oxidative DNA damage associated with combination of guanine and superoxide radicals and repair mechanisms via radical trapping

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Reactive nitrogen species in the chemical biology of inflammation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

DNA lesions derived from the site selective oxidation of Guanine by carbonate radical anions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Mutagenicity, toxicity and repair of DNA base damage induced by oxidation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Temperature-dependence of UV laser one-electron oxidative guanine modifications as a probe of local stacking fluctuations and conformational transitions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Long-distance electron transfer through DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

The carbonate radical is a site-selective oxidizing agent of guanine in double-stranded oligonucleotides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Long-range charge transfer in DNA: transient structural distortions control the distance dependence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Measurement of the main photooxidation products of 2'-deoxyguanosine using chromatographic methods coupled to mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Insertion of dGMP and dAMP during in vitro DNA synthesis opposite an oxidized form of 7,8-dihydro-8-oxoguanine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Role of hydrophobic effects in the reaction of a polynuclear aromatic diol epoxide with oligodeoxynucleotides in aqueous solutions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Gel electrophoretic detection of 7,8-dihydro-8-oxoguanine and 7, 8-dihydro-8-oxoadenine via oxidation by Ir (IV).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Influence of the local helical conformation on the guanine modifications generated from one-electron DNA oxidation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Synthesis and biophysical studies of short oligodeoxynucleotides with novel modifications: a possible approach to the problem of mixed base oligodeoxynucleotide synthesis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Rate of depurination of native deoxyribonucleic acid

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

An abasic site in DNA. Solution conformation determined by proton NMR and molecular mechanics calculations.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

30 September 2017

Solvent effects on ionization potentials of guanine runs and chemically modified guanine in duplex DNA: effect of electrostatic interaction and its reduction due to solvent

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

28 June 2018

DNA sequence context as a determinant of the quantity and chemistry of guanine oxidation produced by hydroxyl radicals and one-electron oxidants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

28 June 2018

Long-range oxidative damage to DNA: effects of distance and sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

28 June 2018

Oxidative damage to DNA: formation, measurement, and biological significance.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517150

28 June 2018

Absolute rates of hole transfer in DNA.

1 reference

https://api.crossref.org/works/10.1002%2FCBIC.201100140

21 January 2018

Mapping the Sites for Selective Oxidation of Guanines in DNA

1 reference

https://api.crossref.org/works/10.1002%2FCBIC.201100140

21 January 2018

Ab initio molecular orbital study on the G-selectivity of GGG triplet in copper(I)-mediated one-electron oxidation

1 reference

https://api.crossref.org/works/10.1002%2FCBIC.201100140

21 January 2018

One-electron oxidation of the guanine moiety of 2'-deoxyguanosine: influence of 8-oxo-7,8-dihydro-2'-deoxyguanosine

1 reference

https://api.crossref.org/works/10.1002%2FCBIC.201100140

21 January 2018

Direct observation of guanine radical cation deprotonation in duplex DNA using pulse radiolysis

1 reference

https://api.crossref.org/works/10.1002%2FCBIC.201100140

21 January 2018

Effect of base sequence and deprotonation of Guanine cation radical in DNA.

1 reference

https://api.crossref.org/works/10.1002%2FCBIC.201100140

21 January 2018

Abasic-site-containing oligodeoxynucleotides as aptamers for riboflavin

1 reference

https://api.crossref.org/works/10.1002%2FCBIC.201100140

21 January 2018

Surviving an Oxygen Atmosphere: DNA Damage and Repair

1 reference

https://api.crossref.org/works/10.1002%2FCBIC.201100140

21 January 2018

Oxidation of guanine and 8-oxo-7,8-dihydroguanine by carbonate radical anions: insight from oxygen-18 labeling experiments

1 reference

https://api.crossref.org/works/10.1002%2FCBIC.201100140

21 January 2018

Mechanism for radical cation transport in duplex DNA oligonucleotides.

1 reference

https://api.crossref.org/works/10.1002%2FCBIC.201100140

21 January 2018

One-electron oxidation of DNA and inflammation processes

1 reference

https://api.crossref.org/works/10.1002%2FCBIC.201100140

21 January 2018

Modification of DNA bases by photosensitized one-electron oxidation

1 reference

https://api.crossref.org/works/10.1002%2FCBIC.201100140

21 January 2018

DNA Damage and Radical Reactions: Mechanistic Aspects, Formation in Cells and Repair Studies

1 reference

https://api.crossref.org/works/10.1002%2FCBIC.201100140

21 January 2018

NMR studies of abasic sites in DNA duplexes: deoxyadenosine stacks into the helix opposite the cyclic analogue of 2-deoxyribose

1 reference

https://pubmed.ncbi.nlm.nih.gov/21656632

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Charge transport in DNA oligonucleotides with various base-pairing patterns

1 reference

https://pubmed.ncbi.nlm.nih.gov/21656632

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Thermodynamic consequences of an abasic lesion in duplex DNA are strongly dependent on base sequence

1 reference

https://pubmed.ncbi.nlm.nih.gov/21656632

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The pH-dependent role of superoxide in riboflavin-catalyzed photooxidation of 8-oxo-7,8-dihydroguanosine

1 reference

https://pubmed.ncbi.nlm.nih.gov/21656632

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Oxidative Nucleobase Modifications Leading to Strand Scission

1 reference

https://pubmed.ncbi.nlm.nih.gov/21656632

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Steric effects on water accessability control sequence-selectivity of radical cation reactions in DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/21656632

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Long-distance charge transport in DNA: the hopping mechanism

1 reference

https://pubmed.ncbi.nlm.nih.gov/21656632

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Removal of hydantoin products of 8-oxoguanine oxidation by the Escherichia coli DNA repair enzyme, FPG

1 reference

https://pubmed.ncbi.nlm.nih.gov/21656632

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Solution conformation of an abasic DNA undecamer duplex d(CGCACXCACGC) x d(GCGTGTGTGCG): the unpaired thymine stacks inside the helix

1 reference

https://pubmed.ncbi.nlm.nih.gov/21656632

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Influence of solvent on the energetics of hole transfer in DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/21656632

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The abasic site as a challenge to DNA polymerase. A nuclear magnetic resonance study of G, C and T opposite a model abasic site

1 reference

https://pubmed.ncbi.nlm.nih.gov/21656632

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1002/CBIC.201100140

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q36453093&oldid=1961377237"