Whole-genome analysis reveals molecular innovations and evolutionary transitions in chromalveolate species (Q36491219)

14 August 2017

Whole-genome analysis reveals molecular innovations and evolutionary transitions in chromalveolate species (English)

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14 August 2017

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whole genome sequencing

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2

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14 August 2017

3

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14 August 2017

Cindy Martens

1

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PMCID

2265158

14 August 2017

language of work or name

English

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publication date

25 February 2008

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Proceedings of the National Academy of Sciences of the United States of America

14 August 2017

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14 August 2017

105

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14 August 2017

9

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14 August 2017

3427-3432

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Principles of protein and lipid targeting in secondary symbiogenesis: euglenoid, dinoflagellate, and sporozoan plastid origins and the eukaryote family tree

14 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Expressed sequence tags from phytophthora sojae reveal genes specific to development and infection

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Phylogenomic analysis supports the monophyly of cryptophytes and haptophytes and the association of rhizaria with chromalveolates

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Identification of Phytophthora sojae genes upregulated during the early stage of soybean infection

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Phytophthora Genome Sequences Uncover Evolutionary Origins and Mechanisms of Pathogenesis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Gene duplication event in family 12 glycosyl hydrolase from Phytophthora spp.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Malaria risk: estimating clinical episodes of malaria.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Phytophthora ramorum: integrative research and management of an emerging pathogen in California and Oregon forests

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Genome of the Host-Cell Transforming Parasite Theileria annulata Compared with T. parva

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

A new Apicomplexa-specific protein kinase family: multiple members in Plasmodium falciparum, all with an export signature

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Comparative analysis of apicomplexa and genomic diversity in eukaryotes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Prevalence of intron gain over intron loss in the evolution of paralogous gene families

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Building genomic profiles for uncovering segmental homology in the twilight zone

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

The Gene Ontology (GO) database and informatics resource

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Statistical significance for genomewide studies

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Recycled plastids: a 'green movement' in eukaryotic evolution

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

The hidden duplication past of Arabidopsis thaliana

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Genome remodeling in ciliated protozoa.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Theileria parva epidemics: a case study in eastern Zambia

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

The phagotrophic origin of eukaryotes and phylogenetic classification of Protozoa

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Hydrolysis of erythrocyte proteins by proteases of malaria parasites

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Genesis: cluster analysis of microarray data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

A kingdom-level phylogeny of eukaryotes based on combined protein data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Protists as opportunistic pathogens: public health impact in the 1990s and beyond

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Transformation of leukocytes by Theileria parva and T. annulata

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

An overview of chemotherapeutic targets for antimalarial drug discovery

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Evolutionary relationships among the eukaryotic crown taxa taking into account site-to-site rate variation in 18S rRNA.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Inferring phylogenies from protein sequences by parsimony, distance, and likelihood methods

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Synaptic vesicle phosphoproteins and regulation of synaptic function

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Regulation of membrane fusion during exocytosis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265158

Phylogenetic relationships among algae based on complete large-subunit rRNA sequences

30 September 2017

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0712248105

Analyses of RNA Polymerase II genes from free-living protists: phylogeny, long branch attraction, and the eukaryotic big bang

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0712248105

Phylogenetic analysis of eukaryotes using heat-shock protein Hsp90.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0712248105

Phylogenetic Analysis Under Dollo's Law

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0712248105

Phylogeny of ultra-rapidly evolving dinoflagellate chloroplast genes: a possible common origin for sporozoan and dinoflagellate plastids.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0712248105

Potassium homeostasis influences the locomotion and encystment of zoospores of plant pathogenic oomycetes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0712248105

Folding of the Plasmodium falciparum cysteine protease falcipain-2 is mediated by a chaperone-like peptide and not the prodomain

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0712248105

Exploring the plant transcriptome through phylogenetic profiling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0712248105

Identification of Cell Wall-Associated Proteins fromPhytophthora ramorum

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0712248105

Characterization of 1,3-beta-glucanase and 1,3;1,4-beta-glucanase genes from Phytophthora infestans

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18299576

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

ALGAE CONTAINING CHLOROPHYLLS a + c ARE PARAPHYLETIC: MOLECULAR EVOLUTIONARY ANALYSIS OF THE CHROMOPHYTA.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18299576

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0712248105

1 reference

release_53luyznqzjgxzo5gxchgoibaoi

14 August 2017

0 references

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/53luyznqzjgxzo5gxchgoibaoi

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMCID

2265158

1 reference

14 August 2017

1 reference

PMCID

2265158