Amino acid polymorphisms in Arabidopsis phytochrome B cause differential responses to light (Q36498561)

14 August 2017

Amino acid polymorphisms in Arabidopsis phytochrome B cause differential responses to light (English)

1 reference

Correction for Filiault et al., Amino acid polymorphisms in Arabidopsis phytochrome B cause differential responses to light

14 August 2017

corrigendum / erratum

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author

Detlef Weigel

6

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14 August 2017

Julin N Maloof

8

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Daniele Filiault

object named as

Daniele L Filiault

1

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Justin O. Borevitz

object named as

Justin O Borevitz

5

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Joanne Chory

7

object named as

Joanne Chory

1 reference

14 August 2017

3

Jose R Dinneny

1 reference

14 August 2017

2

Carolyn A Wessinger

1 reference

14 August 2017

Jason Lutes

4

1 reference

14 August 2017

language of work or name

English

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publication date

14 February 2008

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Proceedings of the National Academy of Sciences of the United States of America

14 August 2017

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14 August 2017

105

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14 August 2017

8

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14 August 2017

3157-3162

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Recombination and linkage disequilibrium in Arabidopsis thaliana.

14 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

An Arabidopsis example of association mapping in structured samples

30 September 2017

1 reference

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Regulatory network construction in Arabidopsis by using genome-wide gene expression quantitative trait loci.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

The PHYTOCHROME C photoreceptor gene mediates natural variation in flowering and growth responses of Arabidopsis thaliana

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Phytochrome structure and signaling mechanisms.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Diversity of flowering responses in wild Arabidopsis thaliana strains

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Natural variation in Arabidopsis. How do we find the causal genes?

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

The pattern of polymorphism in Arabidopsis thaliana

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

bHLH class transcription factors take centre stage in phytochrome signalling

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Light signal transduction in higher plants

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Bioconductor: open software development for computational biology and bioinformatics

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Linkage disequilibrium mapping of Arabidopsis CRY2 flowering time alleles

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

eShadow: a tool for comparing closely related sequences

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Structure of linkage disequilibrium in plants

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

The COP9 Signalosome: Regulating Plant Development Through the Control of Proteolysis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Phytochromes B, D, and E act redundantly to control multiple physiological responses in Arabidopsis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Phylogenetic shadowing of primate sequences to find functional regions of the human genome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Two interacting bZIP proteins are direct targets of COP1-mediated control of light-dependent gene expression in Arabidopsis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Contrasting evolutionary forces in the Arabidopsis thaliana floral developmental pathway

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Quantitative trait loci controlling light and hormone response in two accessions of Arabidopsis thaliana

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

A QTL for flowering time in Arabidopsis reveals a novel allele of CRY2.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Natural variation in phytochrome signaling.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Genetic isolation by distance in Arabidopsis thaliana: biogeography and postglacial colonization of Europe

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

GIGANTEA is a nuclear protein involved in phytochrome signaling in Arabidopsis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Quantitative trait loci and candidate gene mapping of bud set and bud flush in populus.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

30 September 2017

The Staden package, 1998

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

The phytochrome apoprotein family in Arabidopsis is encoded by five genes: the sequences and expression of PHYD and PHYE.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Adaptive protein evolution at the Adh locus in Drosophila

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Clinal variation in phyB2, a candidate gene for day-length-induced growth cessation and bud set, across a latitudinal gradient in European aspen (Populus tremula).

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Isolation and characterization of phyC mutants in Arabidopsis reveals complex crosstalk between phytochrome signaling pathways.

28 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0712174105

Changes in photoperiod or temperature alter the functional relationships between phytochromes and reveal roles for phyD and phyE.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0712174105

Mutant analyses define multiple roles for phytochrome C in Arabidopsis photomorphogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0712174105

Evolutionary rate variation in anthocyanin pathway genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0712174105

Natural variation in light sensitivity of Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0712174105

A light-sensing knot revealed by the structure of the chromophore-binding domain of phytochrome

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0712174105

Plasticity to light cues and resources in Arabidopsis thaliana: testing for adaptive value and costs.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2268601

Quantitative genetic analysis of flowering time in tomato

21 September 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0712174105

A deletion in the PHYD gene of the Arabidopsis Wassilewskija ecotype defines a role for phytochrome D in red/far-red light sensing

21 January 2018

1 reference

12 December 2020

Adaptive evolution in the photosensory domain of phytochrome A in early angiosperms

1 reference

12 December 2020

Patterns of evolutionary rate variation among genes of the anthocyanin biosynthetic pathway

1 reference

12 December 2020

Phytochrome D acts in the shade-avoidance syndrome in Arabidopsis by controlling elongation growth and flowering time

1 reference

12 December 2020

1 reference

12 December 2020

Evidence of adaptive divergence in plasticity: density- and site-dependent selection on shade-avoidance responses in Impatiens capensis

1 reference

12 December 2020

The phytochrome gene family in tomato and the rapid differential evolution of this family in angiosperms

1 reference

12 December 2020

Phytochrome A and Phytochrome B Have Overlapping but Distinct Functions in Arabidopsis Development

1 reference

12 December 2020

Phytochrome E influences internode elongation and flowering time in Arabidopsis

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0712174105

1 reference

14 August 2017

0 references

1 reference

14 August 2017

PubMed publication ID

18287016

1 reference