Mouse TU tagging: a chemical/genetic intersectional method for purifying cell type-specific nascent RNA. (Q36557075)

14 August 2017

Mouse TU tagging: a chemical/genetic intersectional method for purifying cell type-specific nascent RNA. (English)

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14 August 2017

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Leslie Gay

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14 August 2017

Michael R Miller

2

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14 August 2017

P Britten Ventura

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14 August 2017

Vidusha Devasthali

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14 August 2017

Zer Vue

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14 August 2017

Heather L Thompson

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14 August 2017

Sally Temple

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14 August 2017

Hui Zong

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14 August 2017

Michael D Cleary

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14 August 2017

Kryn Stankunas

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Chris Q Doe

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1 January 2013

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27

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14 August 2017

98-115

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Fast gapped-read alignment with Bowtie 2

14 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Cell-type-based analysis of microRNA profiles in the mouse brain.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Gene profiling of laser-microdissected brain regions and individual cells in drug abuse and schizophrenia research

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

High-resolution view of the yeast meiotic program revealed by ribosome profiling

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Ribosome profiling of mouse embryonic stem cells reveals the complexity and dynamics of mammalian proteomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Drug targets: single-cell transcriptomics hastens unbiased discovery

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

FACS purification of immunolabeled cell types from adult rat brain.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

A high-resolution anatomical atlas of the transcriptome in the mouse embryo

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Robo4 cooperates with CXCR4 to specify hematopoietic stem cell localization to bone marrow niches.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

The mouse blood-brain barrier transcriptome: a new resource for understanding the development and function of brain endothelial cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Differential expression analysis for sequence count data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

The contribution of the Tie2+ lineage to primitive and definitive hematopoietic cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Semaphorins guide the entry of dendritic cells into the lymphatics by activating myosin II

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Hematopoietic origin of pathological grooming in Hoxb8 mutant mice

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Adhesive and signaling functions of cadherins and catenins in vertebrate development.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Metabolic tagging and purification of nascent RNA: implications for transcriptomics.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Cell-type-specific isolation of ribosome-associated mRNA from complex tissues

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

The Sequence Alignment/Map format and SAMtools

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Anti-inflammatory effects of angiotensin receptor blockers in the brain and the periphery

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Tight junctions and the regulation of gene expression

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

A translational profiling approach for the molecular characterization of CNS cell types

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Systemic LPS causes chronic neuroinflammation and progressive neurodegeneration

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

FACS-array profiling of striatal projection neuron subtypes in juvenile and adult mouse brains

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Smaller inner ear sensory epithelia in Neurog 1 null mice are related to earlier hair cell cycle exit

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

SOX7 transcription factor: sequence, chromosomal localisation, expression, transactivation and interference with Wnt signalling

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Tie2-Cre transgenic mice: a new model for endothelial cell-lineage analysis in vivo

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Bmx tyrosine kinase is specifically expressed in the endocardium and the endothelium of large arteries

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Generation of a novel Fli-1 protein by gene targeting leads to a defect in thymus development and a delay in Friend virus-induced erythroleukemia

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

TU-tagging: cell type-specific RNA isolation from intact complex tissues

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Application of a translational profiling approach for the comparative analysis of CNS cell types

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

The INTACT method for cell type-specific gene expression and chromatin profiling in Arabidopsis thaliana.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Dual specificity phosphatase 1 (DUSP1) regulates a subset of LPS-induced genes and protects mice from lethal endotoxin shock.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553287

Peripheral lipopolysaccharide stimulation induces interleukin-1 beta messenger RNA in rat brain microglial cells

21 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23307870

12 December 2020

inferred from PubMed ID database lookup

Biosynthetic labeling of RNA with uracil phosphoribosyltransferase allows cell-specific microarray analysis of mRNA synthesis and decay

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23307870

12 December 2020

inferred from PubMed ID database lookup

The homeobox gene Gax inhibits angiogenesis through inhibition of nuclear factor-kappaB-dependent endothelial cell gene expression

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23307870

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1101/GAD.205278.112

1 reference

release_rf53i2ylw5cdndj4glplmkmez4

14 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/rf53i2ylw5cdndj4glplmkmez4

24 November 2022

mapped directly with Wikidata item

1 reference

14 August 2017

1 reference