Genome-wide analysis of signaling networks regulating fatty acid-induced gene expression and organelle biogenesis (Q36562920)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18426976%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

title

Genome-wide analysis of signaling networks regulating fatty acid-induced gene expression and organelle biogenesis (English)

1 reference

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6 January 2020

0 references

3

1 reference

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6 January 2020

John Boyle

5

1 reference

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6 January 2020

author name string

Ramsey A Saleem

1

1 reference

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6 January 2020

Barbara Knoblach

2

1 reference

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6 January 2020

Jennifer J Smith

4

1 reference

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6 January 2020

C Melissa Dobson

6

1 reference

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6 January 2020

Rose Long-O'Donnell

7

1 reference

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6 January 2020

Richard A Rachubinski

8

1 reference

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6 January 2020

John D Aitchison

9

1 reference

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6 January 2020

language of work or name

English

0 references

publication date

1 April 2008

1 reference

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6 January 2020

number of pages

12

1 reference

inferred from page(s)

published in

Journal of Cell Biology

1 reference

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6 January 2020

volume

181

1 reference

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6 January 2020

issue

2

1 reference

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6 January 2020

page(s)

281-292

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18426976%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

6 January 2020

Cytoscape

1 reference

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

cites work

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The importomer--a peroxisomal membrane complex involved in protein translocation into the peroxisome matrix

30 September 2017

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Uniqueness of the mechanism of protein import into the peroxisome matrix: transport of folded, co-factor-bound and oligomeric proteins by shuttling receptors.

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Expression and functional profiling reveal distinct gene classes involved in fatty acid metabolism

30 September 2017

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Snf1-dependent and Snf1-independent pathways of constitutive ADH2 expression in Saccharomyces cerevisiae

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Contribution of the endoplasmic reticulum to peroxisome formation.

30 September 2017

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Quantitative mass spectrometry reveals a role for the GTPase Rho1p in actin organization on the peroxisome membrane

30 September 2017

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Global analysis of protein localization in budding yeast

30 September 2017

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Saccharomyces cerevisiae PIP2 mediating oleic acid induction and peroxisome proliferation is regulated by Adr1p and Pip2p-Oaf1p

30 September 2017

1 reference

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The biochemistry of peroxisomal beta-oxidation in the yeast Saccharomyces cerevisiae

30 September 2017

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30 September 2017

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Dissection of transient oxidative stress response in Saccharomyces cerevisiae by using DNA microarrays

30 September 2017

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Transcriptome profiling to identify genes involved in peroxisome assembly and function

30 September 2017

1 reference

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Yeast Whi2 and Psr1-phosphatase form a complex and regulate STRE-mediated gene expression.

30 September 2017

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The Ceramide-centric universe of lipid-mediated cell regulation: stress encounters of the lipid kind

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2315675

Subcellular localization of the yeast proteome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2315675

Analysis of yeast protein kinases using protein chips.

30 September 2017

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Pex11p plays a primary role in medium-chain fatty acid oxidation, a process that affects peroxisome number and size in Saccharomyces cerevisiae

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2315675

Functional analysis of the Zn(2)Cys(6) transcription factors Oaf1p and Pip2p. Different roles in fatty acid induction of beta-oxidation in Saccharomyces cerevisiae

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2315675

Global regulatory functions of Oaf1p and Pip2p (Oaf2p), transcription factors that regulate genes encoding peroxisomal proteins in Saccharomyces cerevisiae

30 September 2017

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Temporal regulation of RNA polymerase II by Srb10 and Kin28 cyclin-dependent kinases

30 September 2017

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Enlarged peroxisomes are present in oleic acid-grown Yarrowia lipolytica overexpressing the PEX16 gene encoding an intraperoxisomal peripheral membrane peroxin

30 September 2017

1 reference

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30 September 2017

1 reference

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ADR1 and SNF1 mediate different mechanisms in transcriptional regulation of yeast POT1 gene.

30 September 2017

1 reference

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A kinase-cyclin pair in the RNA polymerase II holoenzyme.

30 September 2017

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Regulation of transcription of the gene coding for peroxisomal 3-oxoacyl-CoA thiolase of Saccharomcyes cerevisiae

30 September 2017

1 reference

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Control of peroxisome proliferation in Saccharomyces cerevisiae by ADR1, SNF1 (CAT1, CCR1) and SNF4 (CAT3).

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2315675

The POT1 gene for yeast peroxisomal thiolase is subject to three different mechanisms of regulation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2315675

Dynamic ergosterol- and ceramide-rich domains in the peroxisomal membrane serve as an organizing platform for peroxisome fusion

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2315675

Regulation of peroxisome size and number by fatty acid beta -oxidation in the yeast yarrowia lipolytica

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2315675

Pex3p initiates the formation of a preperoxisomal compartment from a subdomain of the endoplasmic reticulum in Saccharomyces cerevisiae.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2315675

Genome-wide analysis of human kinases in clathrin- and caveolae/raft-mediated endocytosis

21 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1083%2FJCB.200710009

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1083%2FJCB.200710009

Quantitative analysis of gene expression with an improved green fluorescent protein

21 January 2018

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Crossref

https://api.crossref.org/works/10.1083%2FJCB.200710009

Metabolic control of peroxisome abundance

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18426976

12 December 2020

inferred from PubMed ID database lookup

Peroxisomal matrix protein import: the transient pore model

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18426976

12 December 2020

inferred from PubMed ID database lookup

Subunits of the Snf1 kinase heterotrimer show interdependence for association and activity

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18426976

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1083/JCB.200710009

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18426976%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18426976%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

PubMed publication ID

18426976

1 reference