Fast protein folding on downhill energy landscape (Q36572197)

15 August 2017

Fast protein folding on downhill energy landscape (English)

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15 August 2017

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3

Emanuele Paci

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15 August 2017

Andrea Cavalli

1

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PMCID

2323966

15 August 2017

Urs Haberthür

series ordinal

2

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PMCID

2323966

15 August 2017

Amedeo Caflisch

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4

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15 August 2017

1 August 2003

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15 August 2017

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15 August 2017

12

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15 August 2017

8

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15 August 2017

1801-1803

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Molecular dynamics simulations of protein folding from the transition state

15 August 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2323966

Evaluation of a fast implicit solvent model for molecular dynamics simulations

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2323966

Role of native topology investigated by multiple unfolding simulations of four SH3 domains

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2323966

From folding theories to folding proteins: a review and assessment of simulation studies of protein folding and unfolding

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2323966

Folding simulations of a three-stranded antiparallel beta -sheet peptide

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2323966

Fast kinetics and mechanisms in protein folding

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2323966

Understanding protein folding via free-energy surfaces from theory and experiment

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2323966

Towards a complete description of the structural and dynamic properties of the denatured state of barnase and the role of residual structure in folding

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2323966

De novo design of a monomeric three-stranded antiparallel beta-sheet

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2323966

The Levinthal paradox: yesterday and today

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2323966

From Levinthal to pathways to funnels

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2323966

Protein folding funnels: a kinetic approach to the sequence-structure relationship

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2323966

The Key to Solving the Protein-Folding Problem Lies in an Accurate Description of the Denatured State Financial support from the Schweizerischer Nationalfonds (Project no. 21-50929.97) is gratefully acknowledged

30 September 2017

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12 December 2020

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12 December 2020

Comment on the Communication "The Key to Solving the Protein-Folding Problem Lies in an Accurate Description of the Denatured State" by van Gunsteren et al. We thank Eugene Shakhnovich (Harvard University) for pointing out the references on lattice

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12 December 2020

Weak temperature dependence of the free energy surface and folding pathways of structured peptides

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12 December 2020

Native topology or specific interactions: what is more important for protein folding?

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12 December 2020

Folding-unfolding thermodynamics of a beta-heptapeptide from equilibrium simulations

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12 December 2020

Identifiers

DOI

10.1110/PS.0366103

1 reference

15 August 2017

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15 August 2017

1 reference

PMCID

2323966