EF-hand protein dynamics and evolution of calcium signal transduction: an NMR view (Q36587688)

15 August 2017

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title

EF-hand protein dynamics and evolution of calcium signal transduction: an NMR view (English)

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15 August 2017

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Francesco Capozzi

1

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Claudio Luchinat

object named as

Claudio Luchinat

series ordinal

3

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author name string

Federica Casadei

series ordinal

2

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15 August 2017

publication date

7 September 2006

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Journal of Biological Inorganic Chemistry

15 August 2017

published in

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15 August 2017

volume

11

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15 August 2017

issue

8

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15 August 2017

page(s)

949-962

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https://scigraph.springernature.com/pub.10.1007/s00775-006-0163-0

15 August 2017

exact match

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cites work

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Evolutionary diversification of structure and function in the family of intracellular calcium-binding proteins

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Classification and evolution of EF-hand proteins

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Small-angle scattering studies show distinct conformations of calmodulin in its complexes with two peptides based on the regulatory domain of the catalytic subunit of phosphorylase kinase

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Structure/calcium affinity relationships of site III of calmodulin: testing the acid pair hypothesis using calmodulin mutants

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Comparison of the crystal and solution structures of calmodulin and troponin C

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Ca2+ binding in proteins of the calmodulin superfamily: cooperativity, electrostatic contributions and molecular mechanisms

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Four helix bundle diversity in globular proteins

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Mechanism of direct coupling between binding and induced structural change in regulatory calcium binding proteins

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Vector geometry mapping. A method to characterize the conformation of helix-loop-helix calcium-binding proteins

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NMR solution structure of a complex of calmodulin with a binding peptide of the Ca2+ pump

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Structural dynamics in the C-terminal domain of calmodulin at low calcium levels

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Calmodulin in action: diversity in target recognition and activation mechanisms.

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Experimentally exploring the conformational space sampled by domain reorientation in calmodulin

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Novel aspects of calmodulin target recognition and activation

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Ca2+ binding and conformational changes in a calmodulin domain

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Structural characteristics of protein binding sites for calcium and lanthanide ions

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Fluorescence energy transfer analysis of calmodulin-peptide complexes

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A change-in-hand mechanism for S100 signalling

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Acid pairs increase the N-terminal Ca2+ affinity of CaM by increasing the rate of Ca2+ association

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Unexpected structure of the Ca2+-regulatory region from soybean calcium-dependent protein kinase-alpha

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Site-site communication in the EF-hand Ca2+-binding protein calbindin D9k

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Calcium-induced conformational switching of Paramecium calmodulin provides evidence for domain coupling

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Paramagnetically Induced Residual Dipolar Couplings for Solution Structure Determination of Lanthanide Binding Proteins

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Calcium binding proteins. Elucidating the contributions to calcium affinity from an analysis of species variants and peptide fragments

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NMR studies of the E140Q mutant of the carboxy-terminal domain of calmodulin reveal global conformational exchange in the Ca2+-saturated state.

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Calcium-induced structural changes and domain autonomy in calmodulin

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Structure of the regulatory apparatus of a calcium-dependent protein kinase (CDPK): a novel mode of calmodulin-target recognition

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The early adaptive evolution of calmodulin

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Protein dynamics from NMR.

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Rotational Dynamics of Calcium-Free Calmodulin Studied by 15N-NMR Relaxation Measurements

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Crystal structure of a myristoylated CAP-23/NAP-22 N-terminal domain complexed with Ca2+/calmodulin

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Metal-ion affinity and specificity in EF-hand proteins: coordination geometry and domain plasticity in parvalbumin

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Molecular evolution of the calmodulin gene

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Backbone dynamics of calmodulin studied by 15N relaxation using inverse detected two-dimensional NMR spectroscopy: the central helix is flexible.

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An open and shut case.

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Fluorescence anisotropy decay demonstrates calcium-dependent shape changes in photo-cross-linked calmodulin

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Structural basis for the activation of anthrax adenylyl cyclase exotoxin by calmodulin

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The role of dynamics in allosteric regulation

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Gene structure of calcium-dependent protease retains the ancestral organization of the calcium-binding protein gene

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The alternative genome

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Calcium-induced conformational transition revealed by the solution structure of apo calmodulin

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An interaction-based analysis of calcium-induced conformational changes in Ca2+ sensor proteins

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12 December 2020

A model of Ca2+-free calmodulin binding to unconventional myosins reveals how calmodulin acts as a regulatory switch

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12 December 2020

Proteins flex to function

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12 December 2020

Calmodulin structure refined at 1.7 A resolution

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12 December 2020

Structure of the regulatory domain of scallop myosin at 2 A resolution: implications for regulation

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Temperature Dependence of Dynamics and Thermodynamics of the Regulatory Domain of Human Cardiac Troponin C†

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The central helix of calmodulin functions as a flexible tether.

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Backbone dynamics and energetics of a calmodulin domain mutant exchanging between closed and open conformations

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Structural basis for diversity of the EF-hand calcium-binding proteins

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Tunable alignment of macromolecules by filamentous phage yields dipolar coupling interactions

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12 December 2020

Target selectivity in EF-hand calcium binding proteins

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12 December 2020

Quantitative measurements of the cooperativity in an EF-hand protein with sequential calcium binding

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12 December 2020

Changes in calmodulin main-chain dynamics upon ligand binding revealed by cross-correlated NMR relaxation measurements

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12 December 2020

Signal transduction versus buffering activity in Ca(2+)-binding proteins

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12 December 2020

Paramagnetic relaxation as a tool for solution structure determination: Clostridium pasteurianum ferredoxin as an example.

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12 December 2020

The neuronal calcium-sensor proteins

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12 December 2020

NMR solution structure of calcium-saturated skeletal muscle troponin C

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12 December 2020

Solution structure of human beta-parvalbumin and structural comparison with its paralog alpha-parvalbumin and with their rat orthologs

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12 December 2020

Paramagnetism-based refinement strategy for the solution structure of human alpha-parvalbumin

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12 December 2020

Analysis of slow interdomain motion of macromolecules using NMR relaxation data

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12 December 2020

Locating the metal ion in calcium-binding proteins by using cerium(III) as a probe

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12 December 2020

EF-hands at atomic resolution: the structure of human psoriasin (S100A7) solved by MAD phasing

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12 December 2020

Role of the calcium-binding protein parvalbumin in short-term synaptic plasticity.

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12 December 2020

Weak alignment offers new NMR opportunities to study protein structure and dynamics.

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12 December 2020

Protein dynamics from NMR

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12 December 2020

Structure of the core domain of human cardiac troponin in the Ca(2+)-saturated form

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12 December 2020

Evolution of EF-hand calcium-modulated proteins. I. Relationships based on amino acid sequences

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12 December 2020

Redistribution and loss of side chain entropy upon formation of a calmodulin-peptide complex

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12 December 2020

Skeletal muscle myosin light chains are essential for physiological speeds of shortening.

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12 December 2020

Calcium binding and conformational response in EF-hand proteins

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12 December 2020

Magnetic susceptibility tensor anisotropies for a lanthanide ion series in a fixed protein matrix.

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12 December 2020

Structure of calmodulin complexed with an olfactory CNG channel fragment and role of the central linker: residual dipolar couplings to evaluate calmodulin binding modes outside the kinase family.

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12 December 2020

Interactions between domains of apo calmodulin alter calcium binding and stability.

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12 December 2020

Structure of the Ca2+/S100B/NDR kinase peptide complex: insights into S100 target specificity and activation of the kinase

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12 December 2020

Structures of EF-hand Ca(2+)-binding proteins: diversity in the organization, packing and response to Ca2+ binding

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12 December 2020

Strategies for the uses of lanthanide NMR shift probes in the determination of protein structure in solutio. Application to the EF calcium binding site of carp parvalbumin

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12 December 2020

The NMR angle on troponin C

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12 December 2020

Structure of the regulatory domain of scallop myosin at 2.8 A resolution

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12 December 2020

Tuning the Affinity for Lanthanides of Calcium Binding Proteins†

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12 December 2020

Mutational effects on the cooperativity of Ca2+ binding in calmodulin

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12 December 2020

Direct measurement of distances and angles in biomolecules by NMR in a dilute liquid crystalline medium

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12 December 2020

Solution structure of the paramagnetic complex of the N-terminal domain of calmodulin with two Ce3+ ions by 1H NMR

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12 December 2020

Solution structure of Ca(2+)-calmodulin reveals flexible hand-like properties of its domains

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12 December 2020

Diversity of conformational states and changes within the EF-hand protein superfamily

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12 December 2020

Detecting protein kinase recognition modes of calmodulin by residual dipolar couplings in solution NMR.

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12 December 2020

Principal component analysis of the conformational freedom within the EF-hand superfamily

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12 December 2020

Calmodulin target database

1 reference

12 December 2020

10.1007/S00775-006-0163-0

Identifiers

DOI

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15 August 2017

1 reference