Extracting Accurate Precursor Information for Tandem Mass Spectra by RawConverter (Q36649662)

15 August 2017

Extracting Accurate Precursor Information for Tandem Mass Spectra by RawConverter (English)

1 reference

15 August 2017

Lin He

1

1 reference

15 August 2017

Jolene Diedrich

series ordinal

2

1 reference

15 August 2017

Yen-Yin Chu

series ordinal

3

1 reference

15 August 2017

John R Yates

series ordinal

4

1 reference

15 August 2017

language of work or name

English

0 references

publication date

26 October 2015

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15 August 2017

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15 August 2017

87

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15 August 2017

22

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15 August 2017

11361-11367

1 reference

ProLuCID: An improved SEQUEST-like algorithm with enhanced sensitivity and specificity

15 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4777630

DIA-Umpire: comprehensive computational framework for data-independent acquisition proteomics

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4777630

Wavelet-based peak detection and a new charge inference procedure for MS/MS implemented in ProteoWizard's msConvert

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4777630

DeMix workflow for efficient identification of cofragmented peptides in high resolution data-dependent tandem mass spectrometry

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4777630

Correction of errors in tandem mass spectrum extraction enhances phosphopeptide identification.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4777630

A cross-platform toolkit for mass spectrometry and proteomics

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4777630

Andromeda: a peptide search engine integrated into the MaxQuant environment

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4777630

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4777630

High-speed data reduction, feature detection, and MS/MS spectrum quality assessment of shotgun proteomics data sets using high-resolution mass spectrometry

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4777630

Automated approach for quantitative analysis of complex peptide mixtures from tandem mass spectra

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4777630

MS1, MS2, and SQT-three unified, compact, and easily parsed file formats for the storage of shotgun proteomic spectra and identifications.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4777630

DTASelect and Contrast: tools for assembling and comparing protein identifications from shotgun proteomics

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4777630

Large-scale analysis of the yeast proteome by multidimensional protein identification technology

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4777630

pParse: a method for accurate determination of monoisotopic peaks in high-resolution mass spectra.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4777630

Cross-correlation algorithm for calculation of peptide molecular weight from tandem mass spectra

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4777630

Automated reduction and interpretation of high resolution electrospray mass spectra of large molecules.

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4777630

Estimating influence of cofragmentation on peptide quantification and identification in iTRAQ experiments by simulating multiplexed spectra

20 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26499134

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Determination of monoisotopic masses and ion populations for large biomolecules from resolved isotopic distributions

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26499134

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Reorganizing the protein space at the Universal Protein Resource (UniProt)

1 reference

COCI

https://opencitations.net/index/coci/api/v1/citations/10.1093/NAR/GKR981

10.1021/ACS.ANALCHEM.5B02721

24 July 2022

Identifiers

DOI

1 reference

15 August 2017

1 reference

15 August 2017

1 reference