Comprehensive computational analysis of bacterial CRP/FNR superfamily and its target motifs reveals stepwise evolution of transcriptional networks. (Q36663972)

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scientific article published on January 2013

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English	Comprehensive computational analysis of bacterial CRP/FNR superfamily and its target motifs reveals stepwise evolution of transcriptional networks.	scientific article published on January 2013

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22 February 2020

Comprehensive computational analysis of bacterial CRP/FNR superfamily and its target motifs reveals stepwise evolution of transcriptional networks (English)

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22 February 2020

bacterial evolution

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22 February 2020

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Motomu Matsui

1

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22 February 2020

Masaru Tomita

2

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22 February 2020

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1 January 2013

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22 February 2020

Genome Biology and Evolution

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22 February 2020

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22 February 2020

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22 February 2020

267-282

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22 February 2020

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Genomic analysis of a key innovation in an experimental Escherichia coli population

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Expression profiles reveal parallel evolution of epistatic interactions involving the CRP regulon in Escherichia coli

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Non-canonical CRP sites control competence regulons in Escherichia coli and many other gamma-proteobacteria

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Clustering of Pseudomonas aeruginosa transcriptomes from planktonic cultures, developing and mature biofilms reveals distinct expression profiles

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30 September 2017

Identification of the CRP regulon using in vitro and in vivo transcriptional profiling

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Evolutionary comparisons suggest many novel cAMP response protein binding sites in Escherichia coli

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CcpA-dependent carbon catabolite repression in bacteria

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30 September 2017

Phylogeny of the bacterial superfamily of Crp-Fnr transcription regulators: exploiting the metabolic spectrum by controlling alternative gene programs

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Evolution of transcription factors and the gene regulatory network in Escherichia coli

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30 September 2017

Factors influencing the identification of transcription factor binding sites by cross-species comparison.

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30 September 2017

Functional versatility in the CRP-FNR superfamily of transcription factors: FNR and FLP.

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A novel regulatory switch mediated by the FNR-like protein of Lactobacillus casei

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Mechanism of the down-regulation of cAMP receptor protein by glucose in Escherichia coli: role of autoregulation of the crp gene

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fixK, a gene homologous with fnr and crp from Escherichia coli, regulates nitrogen fixation genes both positively and negatively in Rhizobium meliloti

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28 June 2018

Evolution of transcriptional regulatory circuits in bacteria

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Homology between CAP and Fnr, a regulator of anaerobic respiration in Escherichia coli

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12 December 2020

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Identifiers

10.1093/GBE/EVT004

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22 February 2020

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22 February 2020

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22 February 2020

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