Characterization of the mouse adeno-associated virus AAVS1 ortholog. (Q36684136)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15280500%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

title

Characterization of the mouse adeno-associated virus AAVS1 ortholog (English)

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31 December 2019

1

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31 December 2019

Els Henckaerts

4

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31 December 2019

Fabien Campagne

7

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31 December 2019

author name string

Miran Yoon-Robarts

2

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31 December 2019

Peter Ward

3

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31 December 2019

Lucy Skrabanek

5

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31 December 2019

Kenneth I Berns

6

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31 December 2019

R Michael Linden

8

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31 December 2019

language of work or name

English

0 references

publication date

1 August 2004

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31 December 2019

number of pages

5

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based on heuristic

inferred from page(s)

published in

Journal of Virology

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31 December 2019

volume

78

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issue

16

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31 December 2019

page(s)

8917-8921

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Rep-dependent initiation of adeno-associated virus type 2 DNA replication by a herpes simplex virus type 1 replication complex in a reconstituted system

31 December 2019

cites work

1 reference

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Methods for adeno-associated virus-mediated gene transfer into muscle

30 September 2017

1 reference

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Phosphorylation of a novel myosin binding subunit of protein phosphatase 1 reveals a conserved mechanism in the regulation of actin cytoskeleton

30 September 2017

1 reference

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Amino-terminal domain exchange redirects origin-specific interactions of adeno-associated virus rep78 in vitro

30 September 2017

1 reference

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Characteristics of the adeno-associated virus preintegration site in human chromosome 19: open chromatin conformation and transcription-competent environment

30 September 2017

1 reference

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Adeno-associated virus site-specifically integrates into a muscle-specific DNA region

30 September 2017

1 reference

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Roles of adeno-associated virus Rep protein and human chromosome 19 in site-specific recombination

30 September 2017

1 reference

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An adeno-associated virus (AAV) initiator protein, Rep78, catalyzes the cleavage and ligation of single-stranded AAV ori DNA.

30 September 2017

1 reference

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Preserved close linkage between the genes encoding troponin I and troponin T, reflecting an evolution of adapter proteins coupling the Ca(2+) signaling of contractility

30 September 2017

1 reference

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The Mouse Genome Database (MGD): expanding genetic and genomic resources for the laboratory mouse. The Mouse Genome Database Group

30 September 2017

1 reference

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Rep-mediated nicking of the adeno-associated virus origin requires two biochemical activities, DNA helicase activity and transesterification.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479059

Comparative characterization of rep proteins from the helper-dependent adeno-associated virus type 2 and the autonomous goose parvovirus

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479059

Development of animal models for adeno-associated virus site-specific integration

30 September 2017

1 reference

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Adeno-associated virus Rep proteins target DNA sequences to a unique locus in the human genome

30 September 2017

1 reference

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

30 September 2017

1 reference

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Adeno-associated virus Rep78 protein and terminal repeats enhance integration of DNA sequences into the cellular genome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479059

Site-specific integration by adeno-associated virus

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479059

The recombination signals for adeno-associated virus site-specific integration

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479059

Sequence requirements for binding of Rep68 to the adeno-associated virus terminal repeats

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479059

Biologically active Rep proteins of adeno-associated virus type 2 produced as fusion proteins in Escherichia coli

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479059

Adeno-associated virus DNA replication in vitro: activation by a maltose binding protein/Rep 68 fusion protein.

30 September 2017

1 reference

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Identification of linear DNA sequences that specifically bind the adeno-associated virus Rep protein.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479059

Adeno-associated virus (AAV) Rep proteins mediate complex formation between AAV DNA and its integration site in human DNA

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479059

Sequence requirements for stable binding and function of Rep68 on the adeno-associated virus type 2 inverted terminal repeats

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479059

Asymmetric replication in vitro from a human sequence element is dependent on adeno-associated virus Rep protein

30 September 2017

1 reference

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The cryptic life style of adeno-associated virus

30 September 2017

1 reference

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Determination of adeno-associated virus Rep68 and Rep78 binding sites by random sequence oligonucleotide selection

30 September 2017

1 reference

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The AAV origin binding protein Rep68 is an ATP-dependent site-specific endonuclease with DNA helicase activity

30 September 2017

1 reference

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Site-specific integration by adeno-associated virus

30 September 2017

1 reference

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Targeted integration of adeno-associated virus (AAV) into human chromosome 19

30 September 2017

1 reference

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Characterization of a preferred site on human chromosome 19q for integration of adeno-associated virus DNA by non-homologous recombination

30 September 2017

1 reference

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Partial purification of adeno-associated virus Rep78, Rep52, and Rep40 and their biochemical characterization

30 September 2017

1 reference

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Targeted integration of transfected and infected adeno-associated virus vectors containing the neomycin resistance gene

30 September 2017

1 reference

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In vitro resolution of covalently joined AAV chromosome ends

28 June 2018

1 reference

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Mapping and direct visualization of a region-specific viral DNA integration site on chromosome 19q13-qter

28 June 2018

1 reference

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Targeted transgene integration into transgenic mouse fibroblasts carrying the full-length human AAVS1 locus mediated by HSV/AAV rep(+) hybrid amplicon vector.

28 June 2018

1 reference

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Identification of active site residues of the adeno-associated virus type 2 Rep endonuclease

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479059

A Rep recognition sequence is necessary but not sufficient for nicking of DNA by adeno-associated virus type-2 Rep proteins

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479059

Two methods for improving performance of an HMM and their application for gene finding.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=479059

Cardiac and skeletal muscle troponin I isoforms are encoded by a dispersed gene family on mouse Chromosomes 1 and 7

5 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15280500

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/JVI.78.16.8917-8921.2004

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15280500%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

1 reference

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31 December 2019

PubMed publication ID

15280500

1 reference