Biases during DNA extraction of activated sludge samples revealed by high throughput sequencing (Q36824310)

16 August 2017

Biases during DNA extraction of activated sludge samples revealed by high throughput sequencing (English)

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high-throughput sequencing

16 August 2017

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Feng Guo

1

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16 August 2017

Tong Zhang

series ordinal

2

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16 August 2017

language of work or name

English

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publication date

4 July 2012

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Applied Microbiology and Biotechnology

16 August 2017

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16 August 2017

97

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16 August 2017

10

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16 August 2017

4607-4616

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https://scigraph.springernature.com/pub.10.1007/s00253-012-4244-4

16 August 2017

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A metagenome of a full-scale microbial community carrying out enhanced biological phosphorus removal.

29 September 2017

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Microbial community of sulfate-reducing up-flow sludge bed in the SANI® process for saline sewage treatment

29 September 2017

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Bacterial community analysis of activated sludge: an evaluation of four commonly used DNA extraction methods

29 September 2017

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29 September 2017

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Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

29 September 2017

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Focused-Pulsed sludge pre-treatment increases the bacterial diversity and relative abundance of acetoclastic methanogens in a full-scale anaerobic digester

29 September 2017

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Exploring microbial diversity and taxonomy using SSU rRNA hypervariable tag sequencing

29 September 2017

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The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing

29 September 2017

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Comparative study of methods for extraction and purification of environmental DNA from soil and sludge samples

29 September 2017

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Microbial diversity in the deep sea and the underexplored "rare biosphere"

29 September 2017

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Plasmid donor affects host range of promiscuous IncP-1beta plasmid pB10 in an activated-sludge microbial community

29 September 2017

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Identification of bacterial populations in dairy wastewaters by use of 16S rRNA gene sequences and other genetic markers

29 September 2017

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DNA extraction from soils: old bias for new microbial diversity analysis methods

29 September 2017

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Small-Scale DNA Sample Preparation Method for Field PCR Detection of Microbial Cells and Spores in Soil.

29 September 2017

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The involvement of cell-to-cell signals in the development of a bacterial biofilm

29 September 2017

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Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA.

29 September 2017

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Phylogenetic analysis and in situ identification of bacteria in activated sludge

29 September 2017

1 reference

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Probing activated sludge with oligonucleotides specific for proteobacteria: inadequacy of culture-dependent methods for describing microbial community structure

29 September 2017

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A simple method for the isolation of chromosomal DNA from gram positive or acid-fast bacteria

29 September 2017

1 reference

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The EPS matrix: the "house of biofilm cells".

29 September 2017

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Cell envelope architecture in the Chloroflexi: a shifting frontline in a phylogenetic turf war.

27 June 2018

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Improving the recovery of qPCR-grade DNA from sludge and sediment.

5 September 2018

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Statistical assessment of DNA extraction reagent lot variability in real-time quantitative PCR.

5 September 2018

1 reference

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In situ detection of protein-hydrolysing microorganisms in activated sludge

5 September 2018

1 reference

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Tetracycline resistance genes in activated sludge wastewater treatment plants

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3647099

Quantification of functional groups in activated sludge by microautoradiography

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3647099

Extraction and purification of DNA in rhizosphere soil samples for PCR-DGGE analysis of bacterial consortia.

5 September 2018

1 reference

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Nitrospira marina gen. nov. sp. nov.: a chemolithotrophic nitrite-oxidizing bacterium

5 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FS00253-012-4244-4

10.1007/S00253-012-4244-4

21 January 2018

Identifiers

DOI

1 reference

release_o5k7avselneddo4c5qjppyovhm

16 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/o5k7avselneddo4c5qjppyovhm

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

16 August 2017

PubMed publication ID

22760785

1 reference