The U1 snRNA hairpin II as a RNA affinity tag for selecting snoRNP complexes (Q36900536)

17 August 2017

1 reference

title

The U1 snRNA hairpin II as a RNA affinity tag for selecting snoRNP complexes (English)

1 reference

17 August 2017

Dorota Piekna-Przybylska

series ordinal

1

object named as

Dorota Piekna-Przybylska

1 reference

17 August 2017

Ben Liu

2

1 reference

PubMed ID

17673090

17 August 2017

Maurille J Fournier

series ordinal

3

1 reference

PubMed ID

17673090

17 August 2017

language of work or name

English

0 references

publication date

1 January 2007

1 reference

17 August 2017

Methods in Enzymology

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17 August 2017

425

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17 August 2017

317-353

1 reference

Structure and function of archaeal box C/D sRNP core proteins

17 August 2017

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Structural basis of the RNA-binding specificity of human U1A protein

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

The expanding snoRNA world

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

StreptoTag: a novel method for the isolation of RNA-binding proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

SnR31, snR32, and snR33: three novel, non-essential snRNAs from Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

The cotranscriptional assembly of snoRNPs controls the biosynthesis of H/ACA snoRNAs in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

The Saccharomyces cerevisiae TIF6 gene encoding translation initiation factor 6 is required for 60S ribosomal subunit biogenesis

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

The small-subunit processome is a ribosome assembly intermediate

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

The PINc domain protein Utp24, a putative nuclease, is required for the early cleavage steps in 18S rRNA maturation

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

GAPDH enhances group II intron splicing in vitro

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

The human U1 snRNP-specific U1A protein inhibits polyadenylation of its own pre-mRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Purification and characterization of the nuclear RNase P holoenzyme complex reveals extensive subunit overlap with RNase MRP

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Processing of a dicistronic small nucleolar RNA precursor by the RNA endonuclease Rnt1.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Reconstitution of archaeal H/ACA small ribonucleoprotein complexes active in pseudouridylation

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

The RNA of RNase MRP is required for normal processing of ribosomal RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

A nuclear function for RNase MRP.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Enhancement of the StreptoTag method for isolation of endogenously expressed proteins with complex RNA binding targets

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

In vitro assembly of human H/ACA small nucleolar RNPs reveals unique features of U17 and telomerase RNAs

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Expression and purification of homogenous proteins in Saccharomyces cerevisiae based on ubiquitin-FLAG fusion

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

In vitro selection of RNA molecules that bind specific ligands

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Has1p, a member of the DEAD-box family, is required for 40S ribosomal subunit biogenesis in Saccharomyces cerevisiae.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

The continued evolution of two-hybrid screening approaches in yeast: how to outwit different preys with different baits

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

RNA polymerase I transcription and pre-rRNA processing are linked by specific SSU processome components

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Functional organization of the yeast proteome by systematic analysis of protein complexes

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Imp3p and Imp4p mediate formation of essential U3-precursor rRNA (pre-rRNA) duplexes, possibly to recruit the small subunit processome to the pre-rRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Binding of U1A protein to the 3' untranslated region of its pre-mRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Interaction of N-terminal domain of U1A protein with an RNA stem/loop

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Composition and functional characterization of yeast 66S ribosome assembly intermediates.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

A novel purification method for histidine-tagged proteins containing a thrombin cleavage site.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Esf2p, a U3-associated factor required for small-subunit processome assembly and compaction

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

RNA-protein interactions in the yeast three-hybrid system: affinity, sensitivity, and enhanced library screening

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Accumulation of U14 small nuclear RNA in Saccharomyces cerevisiae requires box C, box D, and a 5', 3' terminal stem

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Identification of essential elements in U14 RNA of Saccharomyces cerevisiae.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Ribosome structure and activity are altered in cells lacking snoRNPs that form pseudouridines in the peptidyl transferase center

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Biogenesis of small nuclear RNPs

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Protein trans-acting factors involved in ribosome biogenesis in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Synthesis and assembly of the box C+D small nucleolar RNPs

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Crystal structure of an H/ACA box ribonucleoprotein particle.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

U14 base-pairs with 18S rRNA: a novel snoRNA interaction required for rRNA processing

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

The helicase Has1p is required for snoRNA release from pre-rRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Interference probing of rRNA with snoRNPs: a novel approach for functional mapping of RNA in vivo

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

A computational screen for methylation guide snoRNAs in yeast

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Using Schizosaccharomyces pombe as a host for expression and purification of eukaryotic proteins.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Isolation and characterization of the small nucleolar ribonucleoprotein particle snR30 from Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Cloning vectors for the production of proteins in Dictyostelium discoideum.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

The many facets of H/ACA ribonucleoproteins

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

The pre-ribosomal network

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Coupling between snoRNP assembly and 3' processing controls box C/D snoRNA biosynthesis in yeast

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

The terminal balls characteristic of eukaryotic rRNA transcription units in chromatin spreads are rRNA processing complexes.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

60S pre-ribosome formation viewed from assembly in the nucleolus until export to the cytoplasm

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Yeast Nop15p is an RNA-binding protein required for pre-rRNA processing and cytokinesis

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

In vitro reconstitution and activity of a C/D box methylation guide ribonucleoprotein complex

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Pre-18S ribosomal RNA is structurally compacted into the SSU processome prior to being cleaved from nascent transcripts in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Crystal structure at 1.92 A resolution of the RNA-binding domain of the U1A spliceosomal protein complexed with an RNA hairpin

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

A yeast RNA-hybrid system for the detection of RNA-RNA interactions in vivo

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Assembly into snoRNP controls 5'-end maturation of a box C/D snoRNA in Saccharomyces cerevisiae.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

The tandem affinity purification (TAP) method: a general procedure of protein complex purification

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

A generic protein purification method for protein complex characterization and proteome exploration

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Characterization and purification of Saccharomyces cerevisiae RNase MRP reveals a new unique protein component

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Functional mapping of the U3 small nucleolar RNA from the yeast Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

A comprehensive database for the small nucleolar RNAs from Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

The snoRNA box C/D motif directs nucleolar targeting and also couples snoRNA synthesis and localization

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

An essential domain in Saccharomyces cerevisiae U14 snoRNA is absent in vertebrates, but conserved in other yeasts

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Nog2p, a putative GTPase associated with pre-60S subunits and required for late 60S maturation steps

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Genome-wide searching for pseudouridylation guide snoRNAs: analysis of the Saccharomyces cerevisiae genome

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Streptavidin aptamers: affinity tags for the study of RNAs and ribonucleoproteins

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

RNA affinity tags for purification of RNAs and ribonucleoprotein complexes

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Proteomic snapshot analyses of preribosomal ribonucleoprotein complexes formed at various stages of ribosome biogenesis in yeast and mammalian cells

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Overview of tag protein fusions: from molecular and biochemical fundamentals to commercial systems

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

The complete set of H/ACA snoRNAs that guide rRNA pseudouridylations in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Efficient RNA 2'-O-methylation requires juxtaposed and symmetrically assembled archaeal box C/D and C'/D' RNPs

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

U1-snRNP-A protein selects a ten nucleotide consensus sequence from a degenerate RNA pool presented in various structural contexts

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Affinity purification of recombinant proteins fused to calmodulin or to calmodulin-binding peptides

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

The NMR structure of the 38 kDa U1A protein - PIE RNA complex reveals the basis of cooperativity in regulation of polyadenylation by human U1A protein

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Ribosome synthesis in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

In vitro assembly of the mouse U14 snoRNP core complex and identification of a 65-kDa box C/D-binding protein.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

A common core RNP structure shared between the small nucleoar box C/D RNPs and the spliceosomal U4 snRNP

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Components of an interdependent unit within the SSU processome regulate and mediate its activity.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

Cotranscriptional recruitment of the pseudouridylsynthetase Cbf5p and of the RNA binding protein Naf1p during H/ACA snoRNP assembly

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2807%2925014-1

7 January 2021

10.1016/S0076-6879(07)25014-1

Identifiers

DOI

1 reference

17 August 2017

1 reference

PubMed ID

17673090