Single-Cell RNA-Seq Reveals Lineage and X Chromosome Dynamics in Human Preimplantation Embryos (Q36906085)

17 August 2017

Single-Cell RNA-Seq Reveals Lineage and X Chromosome Dynamics in Human Preimplantation Embryos (English)

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single cell transcriptomics

17 August 2017

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1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

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8

Sten Linnarsson

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17 August 2017

Alvaro Plaza Reyes

7

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Björn Reinius

object named as

Björn Reinius

3

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Qiaolin Deng

object named as

Qiaolin Deng

4

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Rickard Sandberg

9

object named as

Rickard Sandberg

1 reference

17 August 2017

10

Fredrik Lanner

1 reference

17 August 2017

Sophie Petropoulos

1

1 reference

17 August 2017

Daniel Edsgärd

2

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17 August 2017

Sarita Pauliina Panula

5

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17 August 2017

Simone Codeluppi

6

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17 August 2017

language of work or name

English

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publication date

5 April 2016

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external data available at URL

17 August 2017

https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-3929

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A curated database reveals trends in single-cell transcriptomics

11 February 2021

1 reference

17 August 2017

165

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17 August 2017

4

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17 August 2017

1012-1026

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describes a project that uses

17 August 2017

embryo

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A curated database reveals trends in single-cell transcriptomics

7 February 2021

SMART-Seq

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A curated database reveals trends in single-cell transcriptomics

OVO-like 1 regulates progenitor cell fate in human trophoblast development

7 February 2021

cites work

1 reference

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Random monoallelic expression of autosomal genes: stochastic transcription and allele-level regulation

29 September 2017

1 reference

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Diffusion maps for high-dimensional single-cell analysis of differentiation data.

29 September 2017

1 reference

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Erosion of X Chromosome Inactivation in Human Pluripotent Cells Initiates with XACT Coating and Depends on a Specific Heterochromatin Landscape.

29 September 2017

1 reference

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The lncRNA DEANR1 facilitates human endoderm differentiation by activating FOXA2 expression

29 September 2017

1 reference

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Bayesian approach to single-cell differential expression analysis

29 September 2017

1 reference

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X chromosome regulation: diverse patterns in development, tissues and disease

29 September 2017

1 reference

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Full-length RNA-seq from single cells using Smart-seq2.

29 September 2017

1 reference

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X chromosome inactivation and epigenetic responses to cellular reprogramming

29 September 2017

1 reference

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The c-Myc-regulated microRNA-17~92 (miR-17~92) and miR-106a~363 clusters target hCYP19A1 and hGCM1 to inhibit human trophoblast differentiation.

29 September 2017

1 reference

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Analysis of human embryos from zygote to blastocyst reveals distinct gene expression patterns relative to the mouse

29 September 2017

1 reference

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FGF inhibition directs BMP4-mediated differentiation of human embryonic stem cells to syncytiotrophoblast

29 September 2017

1 reference

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The roles of FGF and MAP kinase signaling in the segregation of the epiblast and hypoblast cell lineages in bovine and human embryos

29 September 2017

1 reference

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Human hypoblast formation is not dependent on FGF signalling.

29 September 2017

1 reference

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Evolutionary diversity and developmental regulation of X-chromosome inactivation

29 September 2017

1 reference

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XCI in preimplantation mouse and human embryos: first there is remodelling…

29 September 2017

1 reference

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Eutherian mammals use diverse strategies to initiate X-chromosome inactivation during development.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4868821

The origin and evolution of ARGFX homeobox loci in mammalian radiation

29 September 2017

1 reference

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Random X inactivation and extensive mosaicism in human placenta revealed by analysis of allele-specific gene expression along the X chromosome

29 September 2017

1 reference

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Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4868821

Making the blastocyst: lessons from the mouse

29 September 2017

1 reference

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FGF signal-dependent segregation of primitive endoderm and epiblast in the mouse blastocyst

29 September 2017

1 reference

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Interaction between Oct3/4 and Cdx2 determines trophectoderm differentiation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4868821

Mammalian X-chromosome inactivation: an epigenetics paradigm

29 September 2017

1 reference

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Reactivation of the paternal X chromosome in early mouse embryos

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4868821

Epigenetic dynamics of imprinted X inactivation during early mouse development

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4868821

Gene action in the X-chromosome of the mouse (Mus musculus L.)

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4868821

dbSNP: the NCBI database of genetic variation

29 September 2017

1 reference

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Syncytin is a captive retroviral envelope protein involved in human placental morphogenesis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4868821

Stabilization and localization of Xist RNA are controlled by separate mechanisms and are not sufficient for X inactivation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4868821

Compaction and surface polarity in the human embryo in vitro

29 September 2017

1 reference

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Preferential inactivation of the paternally derived X chromosome in the extraembryonic membranes of the mouse

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4868821

Defining the three cell lineages of the human blastocyst by single-cell RNA-seq.

29 September 2017

1 reference

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Single-cell RNA-seq reveals dynamic, random monoallelic gene expression in mammalian cells

27 June 2018

1 reference

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Accounting for technical noise in single-cell RNA-seq experiments.

27 June 2018

1 reference

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Single-cell RNA-Seq profiling of human preimplantation embryos and embryonic stem cells

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4868821

Developmental differences in the expression of FGF receptors between human and mouse embryos

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4868821

Transcriptomic signature of trophoblast differentiation in a human embryonic stem cell model

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4868821

The evolution of heterochiasmy: the role of sexual selection and sperm competition in determining sex-specific recombination rates in eutherian mammals.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4868821

Reciprocal chemokine receptor and ligand expression in the human placenta: implications for cytotrophoblast differentiation.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4868821

Maternally inherited X chromosome is not inactivated in mouse blastocysts due to parental imprinting

4 September 2018

1 reference

12 December 2020

Sequential X chromosome inactivation coupled with cellular differentiation in early mouse embryos

1 reference

12 December 2020

Tetraploid embryos rescue embryonic lethality caused by an additional maternally inherited X chromosome in the mouse

1 reference

12 December 2020

Evidence for de novo imprinted X-chromosome inactivation independent of meiotic inactivation in mice

1 reference

12 December 2020

10.1016/J.CELL.2016.03.023

Identifiers

DOI

1 reference

17 August 2017

1 reference

17 August 2017

PubMed publication ID

27062923

1 reference