Histone proteomics and the epigenetic regulation of nucleosome mobility (Q36913037)

17 August 2017

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title

Histone proteomics and the epigenetic regulation of nucleosome mobility (English)

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17 August 2017

Michael S Cosgrove

1

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17 August 2017

1 August 2007

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Expert Review of Proteomics

17 August 2017

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17 August 2017

4

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17 August 2017

4

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17 August 2017

465-478

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Epigenetic codes for heterochromatin formation and silencing: rounding up the usual suspects

17 August 2017

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

A genomic code for nucleosome positioning

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Role of DNA sequence in nucleosome stability and dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Structure and dynamic behavior of nucleosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Mobility of histones on the chromosome of simian virus 40

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Mobility of positioned nucleosomes on 5 S rDNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Nucleosome mobilization catalysed by the yeast SWI/SNF complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

ATP-dependent nucleosome remodeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Crystal structure of the nucleosome core particle at 2.8 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Active genes are tri-methylated at K4 of histone H3

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

The language of covalent histone modifications

21 January 2018

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https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Histone modifications: combinatorial complexity or cumulative simplicity?

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

How does the histone code work?

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Histone H2B monoubiquitination functions cooperatively with FACT to regulate elongation by RNA polymerase II

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Acf1 confers unique activities to ACF/CHRAC and promotes the formation rather than disruption of chromatin in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

A Snf2 family ATPase complex required for recruitment of the histone H2A variant Htz1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

SWRred not shaken; mixing the histones

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Tandem bromodomains in the chromatin remodeler RSC recognize acetylated histone H3 Lys14

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Regulated nucleosome mobility and the histone code.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Mass spectrometric analysis of histone posttranslational modifications

21 January 2018

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https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Application of mass spectrometry to the identification and quantification of histone post-translational modifications.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Characterization of histones and their post-translational modifications by mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Interpreting the protein language using proteomics.

21 January 2018

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https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Proteomic analysis of post-translational modifications

21 January 2018

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https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Organismal differences in post-translational modifications in histones H3 and H4.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Acetylation in histone H3 globular domain regulates gene expression in yeast.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Expression patterns and post-translational modifications associated with mammalian histone H3 variants

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Quantitative proteomic analysis of post-translational modifications of human histones

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Characterization of Tetrahymena histone H2B variants and posttranslational populations by electron capture dissociation (ECD) Fourier transform ion cyclotron mass spectrometry (FT-ICR MS).

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Insights into the role of histone H3 and histone H4 core modifiable residues in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Global analysis of functional surfaces of core histones with comprehensive point mutants.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Amino acid substitutions in the structured domains of histones H3 and H4 partially relieve the requirement of the yeast SWI/SNF complex for transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Effects of Sin- versions of histone H4 on yeast chromatin structure and function

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Sin mutations alter inherent nucleosome mobility

21 January 2018

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https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Identification of novel histone post-translational modifications by peptide mass fingerprinting

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

A core nucleosome surface crucial for transcriptional silencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

The LRS and SIN domains: two structurally equivalent but functionally distinct nucleosomal surfaces required for transcriptional silencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Phosphorylation of linker histones regulates ATP-dependent chromatin remodeling enzymes

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Linker histones H1 and H5 prevent the mobility of positioned nucleosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Higher-order structures of chromatin: the elusive 30 nm fiber

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

A role for cell-cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Characterization of lysine 56 of histone H3 as an acetylation site in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Histone H3 lysine 56 acetylation: a new twist in the chromosome cycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

The SIR2 gene family, conserved from bacteria to humans, functions in silencing, cell cycle progression, and chromosome stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

The biochemistry of sirtuins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

The sirtuins hst3 and Hst4p preserve genome integrity by controlling histone h3 lysine 56 deacetylation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Cell cycle and checkpoint regulation of histone H3 K56 acetylation by Hst3 and Hst4.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Yeast Rtt109 promotes genome stability by acetylating histone H3 on lysine 56

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Rtt109 acetylates histone H3 lysine 56 and functions in DNA replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Rtt109 is required for proper H3K56 acetylation: a chromatin mark associated with the elongating RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Histone chaperone Asf1 is required for histone H3 lysine 56 acetylation, a modification associated with S phase in mitosis and meiosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Histone H3-K56 acetylation is catalyzed by histone chaperone-dependent complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

The HIR corepressor complex binds to nucleosomes generating a distinct protein/DNA complex resistant to remodeling by SWI/SNF.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Replication-independent histone deposition by the HIR complex and Asf1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Translating the Histone Code

21 January 2018

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https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Archaeal histones: structures, stability and DNA binding

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Transcription by an archaeal RNA polymerase is slowed but not blocked by an archaeal nucleosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Epigenetic therapy of cancer: past, present and future

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Modifications of human histone H3 variants during mitosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Analysis of core histones by liquid chromatography-mass spectrometry and peptide mapping

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Identification of acetylation and methylation sites of histone H3 from chicken erythrocytes by high-accuracy matrix-assisted laser desorption ionization-time-of-flight, matrix-assisted laser desorption ionization-postsource decay, and nanoelectrospr

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Identification of methylation and acetylation sites on mouse histone H3 using matrix-assisted laser desorption/ionization time-of-flight and nanoelectrospray ionization tandem mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Identification of histone H3 lysine 36 acetylation as a highly conserved histone modification

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Characterization of histone H2A and H2B variants and their post-translational modifications by mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Histone acetylation and deacetylation: identification of acetylation and methylation sites of HeLa histone H4 by mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Shotgun annotation of histone modifications: a new approach for streamlined characterization of proteins by top down mass spectrometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

Mass spectrometric quantification of acetylation at specific lysines within the amino-terminal tail of histone H4

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

TAF1 activates transcription by phosphorylation of serine 33 in histone H2B.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

The Structural Basis of Sirtuin Substrate Affinity†,‡

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.4.465

21 January 2018

Identifiers

DOI

10.1586/14789450.4.4.465

1 reference

17 August 2017

1 reference

PubMed ID

17705705