Currently used nucleic acid amplification tests for the detection of viruses and atypicals in acute respiratory infections (Q36988822)

17 August 2017

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title

Currently used nucleic acid amplification tests for the detection of viruses and atypicals in acute respiratory infections (English)

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17 August 2017

1

Margareta Ieven

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publication date

31 October 2007

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Journal of Clinical Virology

17 August 2017

published in

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17 August 2017

volume

40

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17 August 2017

issue

4

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17 August 2017

page(s)

259-276

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Advances in the laboratory diagnosis of viral respiratory disease

17 August 2017

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Real-Time PCR Assay Targets the 23S-5S Spacer for Direct Detection and Differentiation of Legionella spp. and Legionella pneumophila

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Development and evaluation of NucliSens basic kit NASBA for diagnosis of parainfluenza virus infection with 'end-point' and 'real-time' detection

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Diagnosis of respiratory syncytial virus infection: comparison of reverse transcription-PCR to viral culture and serology in adults with respiratory illness

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Molecular and diagnostic clinical virology in real time

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Simultaneous detection and high-throughput identification of a panel of RNA viruses causing respiratory tract infections

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12 December 2020

Detection of rhinovirus, respiratory syncytial virus, and coronavirus infections in acute otitis media by reverse transcriptase polymerase chain reaction

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12 December 2020

Evaluation of four commercial immunoglobulin G (IgG)- and IgM-specific enzyme immunoassays for diagnosis of Mycoplasma pneumoniae infections

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12 December 2020

Diagnosis of human metapneumovirus infection in immunosuppressed lung transplant recipients and children evaluated for pertussis

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12 December 2020

Molecular diagnosis of influenza

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12 December 2020

Detection of human respiratory syncytial virus in respiratory samples by LightCycler reverse transcriptase PCR.

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12 December 2020

Enzyme-linked immunoassay for detection of PCR-amplified DNA of legionellae in bronchoalveolar fluid

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A multiplex PCR for detection of Mycoplasma pneumoniae, Chlamydophila pneumoniae, Legionella pneumophila, and Bordetella pertussis in clinical specimens

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Impact of sample type on rapid detection of influenza virus A by cytospin-enhanced immunofluorescence and membrane enzyme-linked immunosorbent assay

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Improved detection of rhinoviruses by nucleic acid sequence-based amplification after nucleotide sequence determination of the 5' noncoding regions of additional rhinovirus strains

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Virus discovery by sequence-independent genome amplification

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12 December 2020

Contamination of Qiagen DNA extraction kits with Legionella DNA.

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12 December 2020

Development and evaluation of Chlamylege, a new commercial test allowing simultaneous detection and identification of Legionella, Chlamydophila pneumoniae, and Mycoplasma pneumoniae in clinical respiratory specimens by multiplex PCR.

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12 December 2020

Chlamydia pneumoniae and atherosclerosis: critical assessment of diagnostic methods and relevance to treatment studies

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12 December 2020

Quantitation of respiratory syncytial virus RNA in nasal aspirates of children by real-time RT-PCR assay

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12 December 2020

Identification of a novel coronavirus in patients with severe acute respiratory syndrome

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12 December 2020

Comprehensive detection and identification of human coronaviruses, including the SARS-associated coronavirus, with a single RT-PCR assay

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12 December 2020

Direct detection of Legionella species from bronchoalveolar lavage and open lung biopsy specimens: comparison of LightCycler PCR, in situ hybridization, direct fluorescence antigen detection, and culture

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12 December 2020

Evaluation of NucliSens easyMAG for automated nucleic acid extraction from various clinical specimens

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12 December 2020

Real-time PCR for rapid diagnosis of entero- and rhinovirus infections using LightCycler

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12 December 2020

Identification of a third human polyomavirus

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12 December 2020

Enhanced identification of viral and atypical bacterial pathogens in lower respiratory tract samples with nucleic acid amplification tests

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12 December 2020

Pulmonary complications of solid organ and hematopoietic stem cell transplantation

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12 December 2020

Comparison of a new quantitative ompA-based real-Time PCR TaqMan assay for detection of Chlamydia pneumoniae DNA in respiratory specimens with four conventional PCR assays

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Rapid type-specific diagnosis of adenovirus type 4 infection using a hexon-based quantitative fluorogenic PCR.

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Comparison of 9 different PCR primers for the rapid detection of severe acute respiratory syndrome coronavirus using 2 RNA extraction methods

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Cost-effective use of rapid diagnostic techniques in the treatment and prevention of viral respiratory infections

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Detection and identification of human parainfluenza viruses 1, 2, 3, and 4 in clinical samples of pediatric patients by multiplex reverse transcription-PCR.

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Comparison of a new lateral-flow chromatographic membrane immunoassay to viral culture for rapid detection and differentiation of influenza A and B viruses in respiratory specimens

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Rhinovirus-associated hospitalizations in young children

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12 December 2020

Standardizing Chlamydia pneumoniae assays: recommendations from the Centers for Disease Control and Prevention (USA) and the Laboratory Centre for Disease Control (Canada).

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12 December 2020

Evaluation of commercial amplification kit for detection of Legionella pneumophila in clinical specimens

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Type- and group-specific polymerase chain reaction for adenovirus detection

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12 December 2020

Diagnosis of human metapneumovirus and rhinovirus in patients with respiratory tract infections by an internally controlled multiplex real-time RNA PCR.

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12 December 2020

Two quality control exercises involving nucleic acid amplification methods for detection of Mycoplasma pneumoniae and Chlamydophila pneumoniae and carried out 2 years apart (in 2002 and 2004)

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12 December 2020

Detection of respiratory syncytial virus by reverse transcription-PCR and hybridization with a DNA enzyme immunoassay.

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12 December 2020

Frequent detection of human rhinoviruses, paramyxoviruses, coronaviruses, and bocavirus during acute respiratory tract infections

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12 December 2020

Real-time RT-PCR detection of 12 respiratory viral infections in four triplex reactions

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12 December 2020

Rhinovirus detection: comparison of real-time and conventional PCR.

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12 December 2020

Multiplex polymerase chain reaction for the simultaneous detection of Mycoplasma pneumoniae, Chlamydia pneumoniae, and Chlamydia psittaci in respiratory samples

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12 December 2020

Viral etiology of acute respiratory tract infections in children presenting to hospital: role of polymerase chain reaction and demonstration of multiple infections

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12 December 2020

Identifying influenza viruses with resequencing microarrays.

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12 December 2020

Rapid identification of nine microorganisms causing acute respiratory tract infections by single-tube multiplex reverse transcription-PCR: feasibility study

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12 December 2020

Rapid and sensitive method using multiplex real-time PCR for diagnosis of infections by influenza a and influenza B viruses, respiratory syncytial virus, and parainfluenza viruses 1, 2, 3, and 4.

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12 December 2020

Development and evaluation of nucleic acid sequence based amplification (NASBA) for diagnosis of enterovirus infections using the NucliSens Basic Kit.

1 reference

12 December 2020

Use of polymerase chain reaction for diagnosis of picornavirus infection in subjects with and without respiratory symptoms.

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12 December 2020

Acute viral infections of upper respiratory tract in elderly people living in the community: comparative, prospective, population based study of disease burden

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12 December 2020

Detection of type and subtypes of influenza virus by hybrid formation of FRET probe with amplified target DNA and melting temperature analysis

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12 December 2020

Efficacy of PCR and other diagnostic methods for the detection of respiratory adenoviral infections

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12 December 2020

Evaluation of the Hexaplex assay for detection of respiratory viruses in children

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12 December 2020

Polymerase chain reaction for human picornaviruses

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12 December 2020

Amplicon sequencing and improved detection of human rhinovirus in respiratory samples

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12 December 2020

Comparison of a real-time reverse transcriptase PCR assay and a culture technique for quantitative assessment of viral load in children naturally infected with respiratory syncytial virus

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12 December 2020

Development of one-step, real-time, quantitative reverse transcriptase PCR assays for absolute quantitation of human coronaviruses OC43 and 229E

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12 December 2020

Performance and Cost evaluation of one commercial and six in-house conventional and real-time reverse transcription-pcr assays for detection of severe acute respiratory syndrome coronavirus

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12 December 2020

Development of a respiratory virus panel test for detection of twenty human respiratory viruses by use of multiplex PCR and a fluid microbead-based assay

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12 December 2020

Applicability of a real-time quantitative PCR assay for diagnosis of respiratory syncytial virus infection in immunocompromised adults

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12 December 2020

Development of conventional and real-time PCR assays for detection of Legionella DNA in respiratory specimens

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12 December 2020

Detection of rhinovirus and enterovirus in upper respiratory tract samples using a multiplex nested PCR.

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12 December 2020

Rapid simultaneous diagnosis of infections with respiratory syncytial viruses A and B, influenza viruses A and B, and human parainfluenza virus types 1, 2, and 3 by multiplex quantitative reverse transcription-polymerase chain reaction-enzyme hybrid

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Rapid and simple method for purification of nucleic acids

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12 December 2020

Molecular diagnostics in virology.

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12 December 2020

Human metapneumovirus in children tested at a tertiary-care hospital

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Development of a PCR-and hybridization-based assay (PCR Adenovirus Consensus) for the detection and the species identification of adenoviruses in respiratory specimens

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12 December 2020

A newly discovered human pneumovirus isolated from young children with respiratory tract disease

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12 December 2020

Rapid and quantitative detection of human adenovirus DNA by real‐time PCR

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12 December 2020

Identification and quantification of Chlamydia pneumoniae in human atherosclerotic plaques by LightCycler real-time-PCR.

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12 December 2020

Acute respiratory infection due to Chlamydia pneumoniae: current status of diagnostic methods

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12 December 2020

Molecular assays for detection of human metapneumovirus

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12 December 2020

Evaluation of the Binax NOW, BD Directigen, and BD Directigen EZ assays for detection of respiratory syncytial virus

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12 December 2020

Multicenter proficiency testing of nucleic acid amplification methods for the detection of enteroviruses.

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Rapid detection of influenza A and B viruses in clinical specimens by Light Cycler real time RT-PCR.

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12 December 2020

Oligonucleotide array for simultaneous detection of respiratory viruses using a reverse-line blot hybridization assay

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12 December 2020

The pneumoplex assays, a multiplex PCR-enzyme hybridization assay that allows simultaneous detection of five organisms, Mycoplasma pneumoniae, Chlamydia (Chlamydophila) pneumoniae, Legionella pneumophila, Legionella micdadei, and Bordetella pertussi

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12 December 2020

Evaluation of quantitative and type-specific real-time RT-PCR assays for detection of respiratory syncytial virus in respiratory specimens from children

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12 December 2020

Community respiratory virus infections in immunocompromised patients with cancer

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12 December 2020

A method for the rapid construction of cRNA standard curves in quantitative real-time reverse transcription polymerase chain reaction

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12 December 2020

Rapid diagnosis of a coronavirus associated with severe acute respiratory syndrome (SARS).

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Use of polymerase chain reaction in an epidemiologic investigation of Pontiac fever

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12 December 2020

Detection of Legionella spp. in bronchoalveolar lavage fluids by DNA amplification

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12 December 2020

High prevalence of human bocavirus detected in young children with severe acute lower respiratory tract disease by use of a standard PCR protocol and a novel real-time PCR protocol

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A sensitive, specific, and cost-effective multiplex reverse transcriptase-PCR assay for the detection of seven common respiratory viruses in respiratory samples

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Detection of legionellae in hospital water samples by quantitative real-time LightCycler PCR.

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Community acquired pneumonia--a prospective UK study

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Identification of a new human coronavirus

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12 December 2020

Sensitivity of three serum antibody tests in a large outbreak of Legionnaires' disease in the Netherlands

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12 December 2020

Development of a multiplex real-time quantitative PCR assay to detect Chlamydia pneumoniae, Legionella pneumophila and Mycoplasma pneumoniae in respiratory tract secretions

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Characterization and complete genome sequence of a novel coronavirus, coronavirus HKU1, from patients with pneumonia

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12 December 2020

Evaluation of a quantitative real-time PCR for the detection of respiratory syncytial virus in pulmonary diseases

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12 December 2020

Real-time PCR to improve the diagnosis of respiratory syncytial virus infection

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12 December 2020

Detection of Legionella pneumophila using a real-time PCR hybridization assay

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12 December 2020

Cost-effectiveness of rapid diagnosis of viral respiratory tract infections in pediatric patients

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12 December 2020

Comparison of an industry-derived LCx Chlamydia pneumoniae PCR research kit to in-house assays performed in five laboratories

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12 December 2020

A multi-centre pilot proficiency programme to assess the quality of molecular detection of respiratory viruses.

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12 December 2020

Improved detection of rhinoviruses in clinical samples by using a newly developed nested reverse transcription-PCR assay.

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12 December 2020

Evaluation of a rapid quantitative diagnostic test for adenovirus type 4.

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12 December 2020

Mycoplasma pneumoniae and its role as a human pathogen

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Evaluation of nested polymerase chain methods for the detection of human coronaviruses 229E and OC43.

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12 December 2020

Type-specific identification of human adenovirus 3, 7, and 21 by a multiplex PCR assay

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Real-time reverse transcriptase PCR assay for detection of human metapneumoviruses from all known genetic lineages

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12 December 2020

Utility of an internal control for the polymerase chain reaction. Application to detection of Mycoplasma pneumoniae in clinical specimens

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12 December 2020

Real-time PCR for Chlamydia pneumoniae utilizing the Roche Lightcycler and a 16S rRNA gene target

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12 December 2020

Comparison and evaluation of real-time PCR, real-time nucleic acid sequence-based amplification, conventional PCR, and serology for diagnosis of Mycoplasma pneumoniae

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12 December 2020

Serodiagnosis of respiratory syncytial virus (RSV) infection in children as measured by detection of RSV-specific immunoglobulins G, M, and A with enzyme-linked immunosorbent assay

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12 December 2020

Severe pneumonia and human bocavirus in adult

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12 December 2020

Rapid detection of different RNA respiratory virus species by multiplex RT-PCR: application to clinical specimens.

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12 December 2020

Evaluation of nucleic acid amplification tests in the absence of a perfect gold-standard test: a review of the statistical and epidemiologic issues

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12 December 2020

Detection of Mycoplasma pneumoniae by two polymerase chain reactions and role of M. pneumoniae in acute respiratory tract infections in pediatric patients

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12 December 2020

High-throughput, sensitive, and accurate multiplex PCR-microsphere flow cytometry system for large-scale comprehensive detection of respiratory viruses

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12 December 2020

Prospective evaluation of a dot-blot enzyme immunoassay (Directigen RSV) for the antigenic detection of respiratory syncytial virus from nasopharyngeal aspirates of paediatric patients

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12 December 2020

Identification of a novel polyomavirus from patients with acute respiratory tract infections

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12 December 2020

Simultaneous detection of influenza viruses A and B using real-time quantitative PCR.

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12 December 2020

Comparison of SmartCycler real-time reverse transcription-PCR assay in a public health laboratory with direct immunofluorescence and cell culture assays in a medical center for detection of influenza A virus

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12 December 2020

Novel PCR-probe assay for detection of and discrimination between Legionella pneumophila and other Legionella species in clinical samples

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12 December 2020

Human bocavirus infection in young children in the United States: molecular epidemiological profile and clinical characteristics of a newly emerging respiratory virus.

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12 December 2020

Real-time PCR assays for detection of bocavirus in human specimens

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12 December 2020

Dual infection of infants by human metapneumovirus and human respiratory syncytial virus is strongly associated with severe bronchiolitis.

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12 December 2020

Polymerase chain reaction is more sensitive than viral culture and antigen testing for the detection of respiratory viruses in adults with hematological cancer and pneumonia

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12 December 2020

Comparison of four clinical specimen types for detection of influenza A and B viruses by optical immunoassay (FLU OIA test) and cell culture methods.

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Polymerase chain reaction for rapid diagnosis of respiratory adenovirus infection

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Detection of human coronavirus NL63, human metapneumovirus and respiratory syncytial virus in children with respiratory tract infections in south-west Sweden

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12 December 2020

An Outbreak of Severe Respiratory Tract Infection Due to Human Metapneumovirus in a Long-Term Care Facility

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12 December 2020

Multiplex real-time PCR assay for detection of influenza and human respiratory syncytial viruses.

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12 December 2020

Rapid detection of respiratory syncytial virus in nasopharyngeal aspirates by reverse transcription and polymerase chain reaction amplification

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12 December 2020

Evaluation of eight commercial tests for Mycoplasma pneumoniae antibodies in the absence of acute infection.

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12 December 2020

Real-time PCR in virology

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12 December 2020

Molecular genetic methods in the diagnosis of lower respiratory tract infections

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12 December 2020

Analysis of eight commercial enzyme immunoassay tests for detection of antibodies to Mycoplasma pneumoniae in human serum

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12 December 2020

Frequent detection of human coronaviruses in clinical specimens from patients with respiratory tract infection by use of a novel real-time reverse-transcriptase polymerase chain reaction

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12 December 2020

Comparison of five methods for extraction of Legionella pneumophila from respiratory specimens

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12 December 2020

Respiratory virus infections in bone marrow transplant recipients: the European perspective

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12 December 2020

Broad-spectrum respiratory tract pathogen identification using resequencing DNA microarrays

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12 December 2020

Simultaneous detection of influenza A, B, and C viruses, respiratory syncytial virus, and adenoviruses in clinical samples by multiplex reverse transcription nested-PCR assay.

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12 December 2020

Influenza virus serology--a comparative study

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12 December 2020

A multiplex RT-PCR for the detection of parainfluenza viruses 1-3 in clinical samples

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12 December 2020

The association of newly identified respiratory viruses with lower respiratory tract infections in Korean children, 2000-2005.

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12 December 2020

Practical implementation of a multiplex PCR for acute respiratory tract infections in children

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12 December 2020

Comparison of two real-time quantitative assays for detection of severe acute respiratory syndrome coronavirus

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12 December 2020

Evaluation of 12 commercial tests and the complement fixation test for Mycoplasma pneumoniae-specific immunoglobulin G (IgG) and IgM antibodies, with PCR used as the "gold standard".

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12 December 2020

Comparative evaluation of real-time PCR assays for detection of the human metapneumovirus

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12 December 2020

Human bocavirus: developing evidence for pathogenicity

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12 December 2020

Detection of airborne severe acute respiratory syndrome (SARS) coronavirus and environmental contamination in SARS outbreak units

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12 December 2020

Development of conventional and real-time NASBA for the detection of Legionella species in respiratory specimens

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12 December 2020

Diagnosis of Legionella pneumophila, Mycoplasma pneumoniae, or Chlamydia pneumoniae lower respiratory infection using the polymerase chain reaction on a single throat swab specimen

1 reference

12 December 2020

Evaluation of real-time quantitative PCR for identification and quantification of Chlamydia pneumoniae by comparison with immunohistochemistry

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12 December 2020

10.1016/J.JCV.2007.08.012

Identifiers

DOI

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17 August 2017

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