Systemic cold stress adaptation of Chlamydomonas reinhardtii (Q37072833)

18 August 2017

Systemic cold stress adaptation of Chlamydomonas reinhardtii (English)

1 reference

Chlamydomonas reinhardtii

18 August 2017

1 reference

4

Wolfram Weckwerth

1 reference

18 August 2017

Luis Valledor

1

1 reference

18 August 2017

Takeshi Furuhashi

series ordinal

2

1 reference

18 August 2017

Anne-Mette Hanak

series ordinal

3

1 reference

18 August 2017

5 April 2013

1 reference

Molecular & Cellular Proteomics

18 August 2017

1 reference

18 August 2017

12

1 reference

18 August 2017

8

1 reference

18 August 2017

2032-2047

1 reference

describes a project that uses

18 August 2017

Cytoscape

1 reference

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

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Time-course global expression profiles of Chlamydomonas reinhardtii during photo-biological H₂ production

29 September 2017

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Genome-wide functional annotation and structural verification of metabolic ORFeome of Chlamydomonas reinhardtii

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29 September 2017

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Cold-induced responses in annual bluegrass genotypes with differential resistance to pink snow mold (Microdochium nivale).

29 September 2017

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Regulation of abiotic stress signal transduction by E3 ubiquitin ligases in Arabidopsis

29 September 2017

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AMPK and mTOR regulate autophagy through direct phosphorylation of Ulk1

29 September 2017

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Light and low-CO2-dependent LCIB-LCIC complex localization in the chloroplast supports the carbon-concentrating mechanism in Chlamydomonas reinhardtii

29 September 2017

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Back to the basics: Maximizing the information obtained by quantitative two dimensional gel electrophoresis analyses by an appropriate experimental design and statistical analyses.

29 September 2017

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Cold stress and acclimation - what is important for metabolic adjustment?

29 September 2017

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The making of a chloroplast

29 September 2017

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Autophagy is required for tolerance of drought and salt stress in plants

29 September 2017

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29 September 2017

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Cellular stress and RNA splicing

29 September 2017

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Sparse canonical methods for biological data integration: application to a cross-platform study.

29 September 2017

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Trehalose biosynthesis in response to abiotic stresses

29 September 2017

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Convergent energy and stress signaling

29 September 2017

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Quantitative expression analysis of selected COR genes reveals their differential expression in leaf and crown tissues of wheat (Triticum aestivum L.) during an extended low temperature acclimation regimen

29 September 2017

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Integration of metabolomic and proteomic phenotypes: analysis of data covariance dissects starch and RFO metabolism from low and high temperature compensation response in Arabidopsis thaliana

29 September 2017

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Functional characterization of two cold shock domain proteins from Oryza sativa

29 September 2017

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The ferredoxin/thioredoxin system of oxygenic photosynthesis

29 September 2017

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Metabolomics of temperature stress

29 September 2017

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Integration of metabolomics and proteomics in molecular plant physiology--coping with the complexity by data-dimensionality reduction

29 September 2017

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Fatty acid unsaturation, mobilization, and regulation in the response of plants to stress

29 September 2017

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The Chlamydomonas genome reveals the evolution of key animal and plant functions

29 September 2017

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Cold stress regulation of gene expression in plants.

29 September 2017

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Proposed carbon dioxide concentrating mechanism in Chlamydomonas reinhardtii

29 September 2017

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In-gel digestion for mass spectrometric characterization of proteins and proteomes

29 September 2017

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29 September 2017

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Quantitative proteomic analysis of distinct mammalian Mediator complexes using normalized spectral abundance factors

29 September 2017

1 reference

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Autophagy in development and stress responses of plants

29 September 2017

1 reference

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An inorganic carbon transport system responsible for acclimation specific to air levels of CO2 in Chlamydomonas reinhardtii

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Sugar sensing and signaling in plants: conserved and novel mechanisms

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Stress responsive DEAD-box helicases: a new pathway to engineer plant stress tolerance

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Adaptation and acclimation of photosynthetic microorganisms to permanently cold environments

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Cold, salinity and drought stresses: an overview

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Trehalose 6-phosphate regulates starch synthesis via posttranslational redox activation of ADP-glucose pyrophosphorylase

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Organization of cis-acting regulatory elements in osmotic- and cold-stress-responsive promoters

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Steroid hormone receptor coactivation and alternative RNA splicing by U2AF65-related proteins CAPERalpha and CAPERbeta

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Membrane fluidity and its roles in the perception of environmental signals

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

A prominent role for the CBF cold response pathway in configuring the low-temperature metabolome of Arabidopsis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

The ubiquitin 26S proteasome proteolytic pathway

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Integration of transcriptomics and metabolomics for understanding of global responses to nutritional stresses in Arabidopsis thaliana

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Cytoscape: a software environment for integrated models of biomolecular interaction networks

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Regulatory network of gene expression in the drought and cold stress responses.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Regulation of sucrose to starch conversion in growing potato tubers

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

RNA helicase-like protein as an early regulator of transcription factors for plant chilling and freezing tolerance.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Regulation of the desaturation of fatty acids and its role in tolerance to cold and salt stress.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Carbon flux and fatty acid synthesis in plants

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

SKP1-SnRK protein kinase interactions mediate proteasomal binding of a plant SCF ubiquitin ligase

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

So what's new in the field of plant cold acclimation? Lots!

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

A gene encoding a mitogen-activated protein kinase kinase kinase is induced simultaneously with genes for a mitogen-activated protein kinase and an S6 ribosomal protein kinase by touch, cold, and water stress in Arabidopsis thaliana

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Measurement of protein using bicinchoninic acid

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

ProMEX - a mass spectral reference database for plant proteomics.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Concerted action of the new Genomic Peptide Finder and AUGUSTUS allows for automated proteogenomic annotation of the Chlamydomonas reinhardtii genome.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Difference in the mechanisms of the cold and heat induced unfolding of thioredoxin h from Chlamydomonas reinhardtii: spectroscopic and calorimetric studies

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Growth at low temperature causes nitrogen limitation in the cyanobacterium Synechococcus sp. PCC 7002.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

The different proteomes of Chlamydomonas reinhardtii.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

A metabolomic approach to study major metabolite changes during acclimation to limiting CO2 in Chlamydomonas reinhardtii.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Targeted proteomics for Chlamydomonas reinhardtii combined with rapid subcellular protein fractionation, metabolomics and metabolic flux analyses

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

SnRK1 isoforms AKIN10 and AKIN11 are differentially regulated in Arabidopsis plants under phosphate starvation.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Comparative analysis of leaf-type ferredoxin-NADP oxidoreductase isoforms in Arabidopsis thaliana

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Global transcript levels respond to small changes of the carbon status during progressive exhaustion of carbohydrates in Arabidopsis rosettes

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

A central integrator of transcription networks in plant stress and energy signalling.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Regulation of the beta-hydroxyacyl ACP dehydratase gene of Picea mariana by alternative splicing

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

CO2 limitation induces specific redox-dependent protein phosphorylation in Chlamydomonas reinhardtii.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

The alternative oxidase of plant mitochondria is involved in the acclimation of shoot growth at low temperature. A study of Arabidopsis AOX1a transgenic plants

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

A DEAD box RNA helicase is essential for mRNA export and important for development and stress responses in Arabidopsis

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Exploring the temperature-stress metabolome of Arabidopsis

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Trehalose mediated growth inhibition of Arabidopsis seedlings is due to trehalose-6-phosphate accumulation.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Process for the integrated extraction, identification and quantification of metabolites, proteins and RNA to reveal their co-regulation in biochemical networks

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Members of the Arabidopsis-SKP1-like gene family exhibit a variety of expression patterns and may play diverse roles in Arabidopsis

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Role of the Arabidopsis Glucose Sensor HXK1 in Nutrient, Light, and Hormonal Signaling

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Comparative study of the thermostabilizing properties of mannosylglycerate and other compatible solutes on model enzymes

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Protecting cotton photosynthesis during moderate chilling at high light intensity by increasing chloroplastic antioxidant enzyme activity

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

The Arabidopsis splicing factor SR1 is regulated by alternative splicing.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Transcript accumulation and utilization of alternate and non-consensus splice sites in rice granule-bound starch synthase are temperature-sensitive and controlled by a single-nucleotide polymorphism

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3734567

Investigating Causal Relations by Econometric Models and Cross-spectral Methods

4 September 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M112.026765

Accurate and fast estimation of taxonomic profiles from metagenomic shotgun sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M112.026765

Acclimation and Adaptive Responses of Woody Plants to Environmental Stresses

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M112.026765

Desaturase mutants reveal that membrane rigidification acts as a cold perception mechanism upstream of the diacylglycerol kinase pathway inArabidopsiscells

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M112.026765

Low-temperature modulation of the redox properties of the acceptor side of photosystem II: photoprotection through reaction centre quenching of excess energy

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M112.026765

Spectral counting robust on high mass accuracy mass spectrometers

21 January 2018

1 reference

12 December 2020

Polar-biased localization of the cold stress-induced RNA helicase, CrhC, in the Cyanobacterium Anabaena sp. strain PCC 7120

1 reference

12 December 2020

An improved detergent-compatible gel-fractionation LC-LTQ-Orbitrap-MS workflow for plant and microbial proteomics

1 reference

12 December 2020

Cold acclimation induces changes in Arabidopsis tonoplast protein abundance and activity and alters phosphorylation of tonoplast monosaccharide transporters

1 reference

12 December 2020

Stable isotope-free quantitative shotgun proteomics combined with sample pattern recognition for rapid diagnostics

1 reference

12 December 2020

Chlamydomonas reinhardtii, a model system for functional validation of abiotic stress responsive genes

1 reference

12 December 2020

Transcript and metabolite profiling during cold acclimation of Arabidopsis reveals an intricate relationship of cold-regulated gene expression with modifications in metabolite content

1 reference

12 December 2020

Chilling, oxidative stress and antioxidant responses in Arabidopsis thaliana callus

1 reference

12 December 2020

Identifiers

DOI

10.1074/MCP.M112.026765

1 reference

18 August 2017

1 reference

18 August 2017

PubMed publication ID

23564937

1 reference