Recent spread of a retrotransposon in the Silene latifolia genome, apart from the Y chromosome (Q37102710)

18 August 2017

Recent spread of a retrotransposon in the Silene latifolia genome, apart from the Y chromosome (English)

1 reference

18 August 2017

0 references

Silene latifolia

1 reference

Dmitry A Filatov

1

1 reference

18 August 2017

Elaine C Howell

series ordinal

2

1 reference

18 August 2017

Constantinos Groutides

series ordinal

3

1 reference

18 August 2017

Susan J Armstrong

series ordinal

4

1 reference

18 August 2017

language of work or name

English

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publication date

8 December 2008

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18 August 2017

1 reference

18 August 2017

181

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18 August 2017

2

1 reference

18 August 2017

811-817

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The use of repetitive DNA in cytogenetic studies of plant sex chromosomes

18 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

A cytogenetic view of sex chromosome evolution in plants

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Defining regions and rearrangements of the Silene latifolia Y chromosome.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Recent LTR retrotransposon insertion contrasts with waves of non-LTR insertion since speciation in Drosophila melanogaster

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Transcription-related mutations and GC content drive variation in nucleotide substitution rates across the genomes of Arabidopsis thaliana and Arabidopsis lyrata

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Evolutionary strata on the X chromosomes of the dioecious plant Silene latifolia: evidence from new sex-linked genes

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Dramatic amplification of a rice transposable element during recent domestication

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Accumulation of chloroplast DNA sequences on the Y chromosome of Silene latifolia.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Significant expansion of Vicia pannonica genome size mediated by amplification of a single type of giant retroelement

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Sex chromosome specialization and degeneration in mammals

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Horizontal transfer of a plant transposon

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

A movable feast: diverse retrotransposons and their contribution to barley genome dynamics

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Classification and nomenclature of retrotransposable elements

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Evolutionary forces generating sequence homogeneity and heterogeneity within retrotransposon families

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Stress activation and genomic impact of Tnt1 retrotransposons in Solanaceae

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Retrotransposable elements on the W chromosome of the silkworm, Bombyx mori.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Extreme population structure and high interspecific divergence of the Silene Y chromosome

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Evolutionary history of Silene latifolia sex chromosomes revealed by genetic mapping of four genes

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

A gradual process of recombination restriction in the evolutionary history of the sex chromosomes in dioecious plants

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Evolution of P elements in natural populations of Drosophila willistoni and D. sturtevanti

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Abundance, distribution, and transcriptional activity of repetitive elements in the maize genome

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Four evolutionary strata on the human X chromosome.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

A phylogenetic perspective on P transposable element evolution in Drosophila

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Statistical tests of neutrality of mutations

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Retroviruses in invertebrates: the gypsy retrotransposon is apparently an infectious retrovirus of Drosophila melanogaster

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Horizontal transmission, vertical inactivation, and stochastic loss of mariner-like transposable elements

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Diverse transposable elements are mobilized in hybrid dysgenesis in Drosophila virilis

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

The molecular basis of P-M hybrid dysgenesis: the role of the P element, a P-strain-specific transposon family

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Genetic hitchhiking and the evolution of reduced genetic activity of the Y sex chromosome

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Evidence for horizontal transmission of the P transposable element between Drosophila species

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

The evolution of mobile DNAs: when will transposons create phylogenies that look as if there is a master gene?

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Accumulation of transposable elements in laboratory lines of Drosophila melanogaster

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Production of virus-like particles by the transposable genetic element, copia, of Drosophila melanogaster

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Evidence for degeneration of the Y chromosome in the dioecious plant Silene latifolia

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Phylogenetic determination of the pace of transposable element proliferation in plants: copia and LINE-like elements in Gossypium.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

A selective sweep in the chloroplast DNA of dioecious silene (section Elisanthe).

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Retroelements: tools for sex chromosome evolution

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

High rate of horizontal transfer of transposable elements in Drosophila.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Substitution rates in the X- and Y-linked genes of the plants, Silene latifolia and S. dioica.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Age dependence of the copia transposition rate is positively associated with copia transcript abundance in a Drosophila melanogaster isogenic line.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644968

Population dynamics of the copia, mdg1, mdg3, gypsy, and P transposable elements in a natural population of Drosophila melanogaster

3 September 2018

1 reference

12 December 2020

The relationship between the rate of transposition and transposable element copy number for copia and Doc retrotransposons of Drosophila melanogaster

1 reference

12 December 2020

The mechanism of sex determination in dioecious flowering plants

1 reference

12 December 2020

Low variability in a Y-linked plant gene and its implications for Y-chromosome evolution

1 reference

12 December 2020

The evolution of sex chromosomes

1 reference

12 December 2020

Substitution Rates in a New Silene latifolia Sex-Linked Gene, SlssX/Y

1 reference

12 December 2020

Indirect evidence from DNA sequence diversity for genetic degeneration of the Y-chromosome in dioecious species of the plant Silene: the SlY4/SlX4 and DD44-X/DD44-Y gene pairs

1 reference

12 December 2020

An accumulation of tandem DNA repeats on the Y chromosome in Silene latifolia during early stages of sex chromosome evolution

1 reference

12 December 2020

Selective trade-offs and sex-chromosome evolution in Silene latifolia

1 reference

12 December 2020

Revisiting horizontal transfer of transposable elements in Drosophila

1 reference

12 December 2020

The evolutionary dynamics of repetitive DNA in eukaryotes

1 reference

12 December 2020

10.1534/GENETICS.108.099267

Identifiers

DOI

1 reference

release_tr5hztaw6feu5lodlv22i4nzse

18 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/tr5hztaw6feu5lodlv22i4nzse

24 November 2022

mapped directly with Wikidata item

1 reference

18 August 2017

PubMed publication ID

19064703

1 reference