The chromodomain of Tf1 integrase promotes binding to cDNA and mediates target site selection (Q37110732)

18 August 2017

The chromodomain of Tf1 integrase promotes binding to cDNA and mediates target site selection (English)

1 reference

18 August 2017

Atreyi Ghatak Chatterjee

1

1 reference

18 August 2017

Young Eun Leem

2

1 reference

18 August 2017

Felice D Kelly

3

1 reference

18 August 2017

Henry L Levin

4

1 reference

18 August 2017

language of work or name

English

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publication date

24 December 2008

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18 August 2017

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18 August 2017

83

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18 August 2017

6

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18 August 2017

2675-2685

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describes a project that uses

18 August 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2648289/fullTextXML

inferred from PubMed Central ID database lookup

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The GP(Y/F) domain of TF1 integrase multimerizes when present in a fragment, and substitutions in this domain reduce enzymatic activity of the full-length protein

14 September 2017

1 reference

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Chromodomains direct integration of retrotransposons to heterochromatin.

14 September 2017

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The hermes transposon of Musca domestica is an efficient tool for the mutagenesis of Schizosaccharomyces pombe

14 September 2017

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LEDGF/p75 functions downstream from preintegration complex formation to effect gene-specific HIV-1 integration

14 September 2017

1 reference

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Cooperation between reverse transcriptase and integrase during reverse transcription and formation of the preintegrative complex of Ty1.

14 September 2017

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Basic methods for fission yeast

14 September 2017

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14 September 2017

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14 September 2017

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The long terminal repeat-containing retrotransposon Tf1 possesses amino acids in gag that regulate nuclear localization and particle formation

14 September 2017

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A genomic perspective on the chromodomain-containing retrotransposons: Chromoviruses

14 September 2017

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Retroviral DNA integration: ASLV, HIV, and MLV show distinct target site preferences

14 September 2017

1 reference

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LMO2-associated clonal T cell proliferation in two patients after gene therapy for SCID-X1

14 September 2017

1 reference

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Retrotransposons and their recognition of pol II promoters: a comprehensive survey of the transposable elements from the complete genome sequence of Schizosaccharomyces pombe

14 September 2017

1 reference

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14 September 2017

Integration by design

1 reference

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Controlling integration specificity of a yeast retrotransposon

14 September 2017

1 reference

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A long terminal repeat retrotransposon of fission yeast has strong preferences for specific sites of insertion

14 September 2017

1 reference

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HIV-1 integration in the human genome favors active genes and local hotspots

14 September 2017

1 reference

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Structure of the HP1 chromodomain bound to histone H3 methylated at lysine 9

14 September 2017

1 reference

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Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tail

14 September 2017

1 reference

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Molecular biology of the chromo domain: an ancient chromatin module comes of age.

14 September 2017

1 reference

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Role of histone H3 lysine 9 methylation in epigenetic control of heterochromatin assembly

14 September 2017

1 reference

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Target DNA structure plays a critical role in Tn7 transposition

14 September 2017

1 reference

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Fission yeast retrotransposon Tf1 integration is targeted to 5' ends of open reading frames

14 September 2017

1 reference

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Recognition of triple-helical DNA structures by transposon Tn7.

14 September 2017

1 reference

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Modular evolution of the integrase domain in the Ty3/Gypsy class of LTR retrotransposons

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648289

Human immunodeficiency virus type 1 integrase protein promotes reverse transcription through specific interactions with the nucleoprotein reverse transcription complex.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648289

A map of interactions between the proteins of a retrotransposon

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648289

Target choice and orientation preference of the insertion sequence IS903

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648289

The application of a homologous recombination assay revealed amino acid residues in an LTR-retrotransposon that were critical for integration.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648289

An unusual mechanism of self-primed reverse transcription requires the RNase H domain of reverse transcriptase to cleave an RNA duplex

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648289

Novel gene expression mechanism in a fission yeast retroelement: Tf1 proteins are derived from a single primary translation product

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648289

A novel mechanism of self-primed reverse transcription defines a new family of retroelements

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648289

Amino Acid Sequence Analysis of Reverse Transcriptase Subunits from Avian Myeloblastosis Virus

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648289

Characterization of mouse mammary tumor virus gag-pro gene products and the ribosomal frameshift site by protein sequencing

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648289

Characterization of a transpositionally active Ty3 element and identification of the Ty3 integrase protein

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648289

Virus-coded origin of a 32,000-dalton protein from avian retrovirus cores: structural relatedness of p32 and the beta polypeptide of the avian retrovirus DNA polymerase

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648289

A role for LEDGF/p75 in targeting HIV DNA integration

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648289

Proteolytic processing of Ty3 proteins is required for transposition

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648289

Genome-wide analysis of chromosomal features repressing human immunodeficiency virus transcription.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648289

Structural characterization of the avian retrovirus reverse transcriptase and endonuclease domains

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648289

The integrase of the long terminal repeat-retrotransposon tf1 has a chromodomain that modulates integrase activities.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2648289

IS231A insertion specificity: consensus sequence and DNA bending at the target site

3 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19109383

12 December 2020

inferred from PubMed ID database lookup

Comparative analysis of regulatory transcription factors in Schizosaccharomyces pombe and budding yeasts

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19109383

12 December 2020

inferred from PubMed ID database lookup

Yeast retrotransposons: finding a nice quiet neighborhood

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19109383

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1128/JVI.01588-08

1 reference

18 August 2017

1 reference

18 August 2017

PubMed publication ID

19109383

1 reference