Patterns of gene-specific and total transcriptional activity during the Plasmodium falciparum intraerythrocytic developmental cycle (Q37121996)

18 August 2017

Patterns of gene-specific and total transcriptional activity during the Plasmodium falciparum intraerythrocytic developmental cycle (English)

1 reference

18 August 2017

Plasmodium falciparum

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6

Dyann F Wirth

1 reference

18 August 2017

Jennifer S Sims

1

1 reference

18 August 2017

Kevin T Militello

2

1 reference

18 August 2017

Peter A Sims

3

1 reference

18 August 2017

Vishal P Patel

4

1 reference

18 August 2017

Jacob M Kasper

5

1 reference

18 August 2017

language of work or name

1 reference

16 January 2009

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18 August 2017

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18 August 2017

8

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18 August 2017

3

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18 August 2017

327-338

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describes a project that uses

18 August 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2653245/fullTextXML

inferred from PubMed Central ID database lookup

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Specific DNA-binding by apicomplexan AP2 transcription factors

14 September 2017

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Distinct and stage specific nuclear factors regulate the expression of falcipains, Plasmodium falciparum cysteine proteases

14 September 2017

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In silico discovery of transcription regulatory elements in Plasmodium falciparum.

14 September 2017

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Antisense RNA and RNAi in protozoan parasites: working hard or hardly working?

14 September 2017

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14 September 2017

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Shared epigenetic mechanisms control virulence factors in protozoan parasites

14 September 2017

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Imaging Drosophila gene activation and polymerase pausing in vivo

14 September 2017

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Epigenetics in Apicomplexa: control of gene expression during cell cycle progression, differentiation and antigenic variation

14 September 2017

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Mechanisms of gene regulation in Plasmodium.

14 September 2017

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Whole-genome analysis of mRNA decay in Plasmodium falciparum reveals a global lengthening of mRNA half-life during the intra-erythrocytic development cycle

14 September 2017

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Transcription reactivation steps stimulated by oocyte maturation in C. elegans

14 September 2017

1 reference

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Regulation of sexual development of Plasmodium by translational repression

14 September 2017

1 reference

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Comparative whole genome transcriptome analysis of three Plasmodium falciparum strains

14 September 2017

1 reference

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Combinatorial gene regulation in Plasmodium falciparum

14 September 2017

1 reference

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Prediction of the general transcription factors associated with RNA polymerase II in Plasmodium falciparum: conserved features and differences relative to other eukaryotes

14 September 2017

1 reference

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Discovery of the principal specific transcription factors of Apicomplexa and their implication for the evolution of the AP2-integrase DNA binding domains

14 September 2017

1 reference

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The 'permeome' of the malaria parasite: an overview of the membrane transport proteins of Plasmodium falciparum

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Recombinant and native Plasmodium falciparum TATA-binding-protein binds to a specific TATA box element in promoter regions

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

PfMyb1, a Plasmodium falciparum transcription factor, is required for intra-erythrocytic growth and controls key genes for cell cycle regulation

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses

14 September 2017

1 reference

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Global analysis of transcript and protein levels across the Plasmodium falciparum life cycle

14 September 2017

1 reference

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The structure and role of RNA polymerases in Plasmodium

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Genomic run-on evaluates transcription rates for all yeast genes and identifies gene regulatory mechanisms

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Comparative genomics of transcriptional control in the human malaria parasite Plasmodium falciparum

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

RNA interference in protozoan parasites

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

The transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

The power of the 3' UTR: translational control and development

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Discovery of gene function by expression profiling of the malaria parasite life cycle

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Expression of a recombinant IRP-like Plasmodium falciparum protein that specifically binds putative plasmodial IREs

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

A proteomic view of the Plasmodium falciparum life cycle

14 September 2017

1 reference

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Genome sequence of the human malaria parasite Plasmodium falciparum

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Serial analysis of gene expression in Plasmodium falciparum reveals the global expression profile of erythrocytic stages and the presence of anti-sense transcripts in the malarial parasite

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

A new mathematical model for relative quantification in real-time RT-PCR

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Transcription occurs in pulses in muscle fibers

14 September 2017

1 reference

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Relation of the stage of parasite development in the peripheral blood to prognosis in severe falciparum malaria

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

A major developmental transition in early Xenopus embryos: II. Control of the onset of transcription

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Transcription mapping of a 100 kb locus of Plasmodium falciparum identifies an intergenic region in which transcription terminates and reinitiates

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Human malaria parasites in continuous culture

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Quantitative assessment of antimalarial activity in vitro by a semiautomated microdilution technique

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Synchronization of Plasmodium falciparum Erythrocytic Stages in Culture

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Cell cycle-dependent regulation of RNA polymerase II basal transcription activity

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Protein and nucleic acid synthesis during synchronized growth of Plasmodium falciparum

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

A sequence element associated with thePlasmodium falciparumKAHRP gene is the site of developmentally regulated protein-DNA interactions

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Distinct activated and non-activated RNA polymerase II complexes in yeast

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Computational analysis of Plasmodium falciparum metabolism: organizing genomic information to facilitate drug discovery

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Discovering regulatory motifs in the Plasmodium genome using comparative genomics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Regulatory motifs uncovered among gene expression clusters in Plasmodium falciparum

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Mapping of the Plasmodium falciparum multidrug resistance gene 5'-upstream region, and evidence of induction of transcript levels by antimalarial drugs in chloroquine sensitive parasites

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

In vitro stage-specific sensitivity of Plasmodium falciparum to quinine and artemisinin drugs

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Stage-dependent toxicity of N-acetyl-glucosamine to Plasmodium falciparum

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Stage-specific sensitivity of Plasmodium falciparum to antifolates.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Developmental regulation of stage-specific ribosome populations in Plasmodium

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

The structure of the calmodulin gene of Plasmodium falciparum

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Partial purification and properties of calf thymus deoxyribonucleic acid dependent RNA polymerase III

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Rhythmic changes in transcriptional activity during the development of potato tubers.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Distinct physiological states of Plasmodium falciparum in malaria-infected patients

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

An enhancer-like region regulates hrp3 promoter stage-specific gene expression in the human malaria parasite Plasmodium falciparum

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

A genome-wide map of diversity in Plasmodium falciparum

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

RNA polymerase II synthesizes antisense RNA in Plasmodium falciparum

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Widespread distribution of antisense transcripts in the Plasmodium falciparum genome

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Identification of regulatory elements in the Plasmodium falciparum genome

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Nuclear run-on assays: assessing transcription by measuring density of engaged RNA polymerases.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Mutational analysis identifies a five base pair cis-acting sequence essential for GBP130 promoter activity in Plasmodium falciparum

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Identification of an effector protein and gain-of-function mutants that activate Pfmrk, a malarial cyclin-dependent protein kinase

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

Stage specific expression of proliferating cell nuclear antigen and DNA polymerase delta from Plasmodium falciparum

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2653245

A 24 bp cis-acting element essential for the transcriptional activity of Plasmodium falciparum CDP-diacylglycerol synthase gene promoter

3 September 2018

1 reference

12 December 2020

Stage-specific merozoite surface protein 2 antisense transcripts in Plasmodium falciparum

1 reference

12 December 2020

Time-course of synthesis, transport and incorporation of a protein identified in purified membranes of host erythrocytes infected with a knob-forming strain of Plasmodium falciparum

1 reference

12 December 2020

The DNA polymerase delta promoter from Plasmodium falciparum contains an unusually long 5' untranslated region and intrinsic DNA curvature

1 reference

12 December 2020

Nuclear run-on analysis of var gene expression in Plasmodium falciparum

1 reference

12 December 2020

Stage-specific protein synthesis by asexual blood stage parasites of Plasmodium falciparum

1 reference

12 December 2020

Specific Inhibition of Nuclear RNA Polymerase II by α-Amanitin

1 reference

12 December 2020

Identifiers

DOI

10.1128/EC.00340-08

1 reference

18 August 2017

1 reference

18 August 2017

1 reference