A conserved virus-induced cytoplasmic TRAMP-like complex recruits the exosome to target viral RNA for degradation. (Q37151378)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27474443%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

title

A conserved virus-induced cytoplasmic TRAMP-like complex recruits the exosome to target viral RNA for degradation (English)

1 reference

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20 March 2020

1 reference

Rrp6 Dmel_CG7292

1 reference

Mtr4 helicase Dmel_CG4152

1 reference

Zinc finger CCHC-type containing 7 Dmel_CG9715

1 reference

Ski6 Dmel_CG15481

1 reference

Rrp4 Dmel_CG3931

1 reference

author

Ryan H Moy

3

1 reference

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20 March 2020

Torben Heick Jensen

9

1 reference

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20 March 2020

Jeremy Wilusz

10

1 reference

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20 March 2020

2

Leah R Sabin

1 reference

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20 March 2020

author name string

Jerome M Molleston

1

1 reference

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20 March 2020

Sanjay V Menghani

4

1 reference

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20 March 2020

Keiko Rausch

5

1 reference

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20 March 2020

Beth Gordesky-Gold

6

1 reference

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20 March 2020

Kaycie C Hopkins

7

1 reference

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20 March 2020

Rui Zhou

8

1 reference

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20 March 2020

Sara Cherry

11

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20 March 2020

publication date

1 July 2016

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20 March 2020

1 reference

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20 March 2020

volume

30

1 reference

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20 March 2020

issue

14

1 reference

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20 March 2020

page(s)

1658-1670

1 reference

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DDX21 translocates from nucleus to cytoplasm and stimulates the innate immune response due to dengue virus infection

20 March 2020

cites work

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6 September 2017

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6 September 2017

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Antiviral autophagy restrictsRift Valley fever virus infection and is conserved from flies to mammals

6 September 2017

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6 September 2017

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The human cap-binding complex is functionally connected to the nuclear RNA exosome

6 September 2017

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Threading the barrel of the RNA exosome

6 September 2017

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A genome-wide RNAi screen reveals that mRNA decapping restricts bunyaviral replication by limiting the pools of Dcp2-accessible targets for cap-snatching

6 September 2017

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Transcriptional pausing controls a rapid antiviral innate immune response in Drosophila

6 September 2017

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A triple helix stabilizes the 3' ends of long noncoding RNAs that lack poly(A) tails

6 September 2017

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Air proteins control differential TRAMP substrate specificity for nuclear RNA surveillance

6 September 2017

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Critical role of an antiviral stress granule containing RIG-I and PKR in viral detection and innate immunity

6 September 2017

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AMP-activated kinase restricts Rift Valley fever virus infection by inhibiting fatty acid synthesis

6 September 2017

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Characterization of wild-type and alternate transcription termination signals in the Rift Valley fever virus genome

6 September 2017

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Air1 zinc knuckles 4 and 5 and a conserved IWRXY motif are critical for the function and integrity of the Trf4/5-Air1/2-Mtr4 polyadenylation (TRAMP) RNA quality control complex

6 September 2017

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DDX60, a DEXD/H box helicase, is a novel antiviral factor promoting RIG-I-like receptor-mediated signaling

6 September 2017

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Nucleic acid recognition by the innate immune system

6 September 2017

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Rift valley fever virus infection of human cells and insect hosts is promoted by protein kinase C epsilon

6 September 2017

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The exozyme model: a continuum of functionally distinct complexes.

6 September 2017

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Ars2 regulates both miRNA- and siRNA- dependent silencing and suppresses RNA virus infection in Drosophila

6 September 2017

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The exosome associates cotranscriptionally with the nascent pre-mRNP through interactions with heterogeneous nuclear ribonucleoproteins

6 September 2017

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6 September 2017

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The many pathways of RNA degradation

6 September 2017

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3' end processing of a long nuclear-retained noncoding RNA yields a tRNA-like cytoplasmic RNA

6 September 2017

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6 September 2017

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TRF4 is involved in polyadenylation of snRNAs in Drosophila melanogaster

6 September 2017

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The nuclear RNA surveillance machinery: the link between ncRNAs and genome structure in budding yeast?

6 September 2017

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The exosome subunit Rrp44 plays a direct role in RNA substrate recognition

6 September 2017

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RNA regulons: coordination of post-transcriptional events

6 September 2017

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Localization of AU-rich element-containing mRNA in cytoplasmic granules containing exosome subunits

6 September 2017

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Bunyavirus mRNA synthesis is coupled to translation to prevent premature transcription termination

6 September 2017

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A Shared Transcription Termination Signal on Negative and Ambisense RNA Genome Segments of Rift Valley Fever, Sandfly Fever Sicilian, and Toscana Viruses

6 September 2017

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The highways and byways of mRNA decay

6 September 2017

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The zinc-finger antiviral protein recruits the RNA processing exosome to degrade the target mRNA

6 September 2017

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5'-Triphosphate RNA is the ligand for RIG-I

6 September 2017

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RIG-I-mediated antiviral responses to single-stranded RNA bearing 5'-phosphates

6 September 2017

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RNA-quality control by the exosome

6 September 2017

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Differential roles of MDA5 and RIG-I helicases in the recognition of RNA viruses

6 September 2017

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6 September 2017

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A vesicular stomatitis virus recombinant expressing granulocyte-macrophage colony-stimulating factor induces enhanced T-cell responses and is highly attenuated for replication in animals

6 September 2017

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6 September 2017

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Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase

6 September 2017

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RNA degradation by the exosome is promoted by a nuclear polyadenylation complex

6 September 2017

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A new yeast poly(A) polymerase complex involved in RNA quality control

6 September 2017

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Genome-wide RNAi screen reveals a specific sensitivity of IRES-containing RNA viruses to host translation inhibition

6 September 2017

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6 September 2017

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6 September 2017

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Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S. cerevisiae

6 September 2017

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Genome-wide RNAi analysis of growth and viability in Drosophila cells

6 September 2017

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Decapping and Decay of Messenger RNA Occur in Cytoplasmic Processing Bodies

6 September 2017

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Spermatogenetic expression of RNA-binding motif protein 7, a protein that interacts with splicing factors

6 September 2017

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The mammalian exosome mediates the efficient degradation of mRNAs that contain AU-rich elements

6 September 2017

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AU binding proteins recruit the exosome to degrade ARE-containing mRNAs

6 September 2017

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Mutations in the Drosophila dTAK1 gene reveal a conserved function for MAPKKKs in the control of rel/NF-kappaB-dependent innate immune responses

6 September 2017

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The yeast antiviral proteins Ski2p, Ski3p, and Ski8p exist as a complex in vivo

6 September 2017

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Functions of the exosome in rRNA, snoRNA and snRNA synthesis

6 September 2017

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6 September 2017

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Ski6p is a homolog of RNA-processing enzymes that affects translation of non-poly(A) mRNAs and 60S ribosomal subunit biogenesis

6 September 2017

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The 3' to 5' degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3' to 5' exonucleases of the exosome complex

6 September 2017

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A study of the interferon antiviral mechanism: apoptosis activation by the 2-5A system

6 September 2017

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Yeast cells lacking 5'-->3' exoribonuclease 1 contain mRNA species that are poly(A) deficient and partially lack the 5' cap structure

6 September 2017

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The alphaviruses: gene expression, replication, and evolution

6 September 2017

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Deadenylation of the unstable mRNA encoded by the yeast MFA2 gene leads to decapping followed by 5'-->3' digestion of the transcript

6 September 2017

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Decoying the cap- mRNA degradation system by a double-stranded RNA virus and poly(A)- mRNA surveillance by a yeast antiviral system

6 September 2017

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A dominant negative mutant of 2-5A-dependent RNase suppresses antiproliferative and antiviral effects of interferon

6 September 2017

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Bunyavirus RNA Synthesis: Genome Transcription and Replication

6 September 2017

1 reference

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A nuclear surveillance pathway for mRNAs with defective polyadenylation.

6 September 2017

1 reference

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Comparative analysis of argonaute-dependent small RNA pathways in Drosophila

14 September 2017

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Characterization of Rift Valley fever virus transcriptional terminations.

14 September 2017

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Clinical and laboratory manifestations of Sindbis virus infection: prospective study, Finland, 2002-2003.

14 September 2017

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Entry is a rate-limiting step for viral infection in a Drosophila melanogaster model of pathogenesis

14 September 2017

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Interaction profiling identifies the human nuclear exosome targeting complex

14 September 2017

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Nuclear pore component Nup98 is a potential tumor suppressor and regulates posttranscriptional expression of select p53 target genes

29 September 2017

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Autophagy is an essential component of Drosophila immunity against vesicular stomatitis virus

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4973295

The human nuclear exosome targeting complex is loaded onto newly synthesized RNA to direct early ribonucleolysis.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4973295

Heterogeneous nuclear ribonuclear protein K interacts with Sindbis virus nonstructural proteins and viral subgenomic mRNA.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4973295

3 September 2018

Identifiers

DOI

10.1101/GAD.284604.116

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27474443%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27474443%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

PubMed publication ID

27474443

1 reference