Diversity, Biogeography, and Biodegradation Potential of Actinobacteria in the Deep-Sea Sediments along the Southwest Indian Ridge (Q37212792)

19 August 2017

Diversity, Biogeography, and Biodegradation Potential of Actinobacteria in the Deep-Sea Sediments along the Southwest Indian Ridge (English)

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19 August 2017

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Ping Chen

1

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19 August 2017

Limin Zhang

2

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19 August 2017

Xiaoxuan Guo

3

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19 August 2017

Xin Dai

4

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19 August 2017

Li Liu

5

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19 August 2017

Lijun Xi

6

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19 August 2017

Jian Wang

7

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19 August 2017

Lei Song

8

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19 August 2017

Yuezhu Wang

9

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19 August 2017

Yaxin Zhu

10

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19 August 2017

Li Huang

11

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19 August 2017

Ying Huang

12

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19 August 2017

language of work or name

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29 August 2016

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Frontiers in Microbiology

19 August 2017

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19 August 2017

7

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19 August 2017

1340

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Expanding the World of Marine Bacterial and Archaeal Clades

19 August 2017

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Effects of high hydrostatic pressure on coastal bacterial community abundance and diversity

6 September 2017

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Bioprospecting from marine sediments of New Brunswick, Canada: exploring the relationship between total bacterial diversity and actinobacteria diversity

6 September 2017

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Diversity and novelty of actinobacteria in Arctic marine sediments

6 September 2017

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Microbial communities in semi-consolidated carbonate sediments of the Southwest Indian Ridge

6 September 2017

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Microbial sulfur cycle in two hydrothermal chimneys on the Southwest Indian Ridge

6 September 2017

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6 September 2017

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Pyrosequencing reveals contrasting soil bacterial diversity and community structure of two main winter wheat cropping systems in China

6 September 2017

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The microbial gene diversity along an elevation gradient of the Tibetan grassland.

6 September 2017

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Targeted search for actinomycetes from nearshore and deep-sea marine sediments

6 September 2017

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Correlating microbial community profiles with geochemical data in highly stratified sediments from the Arctic Mid-Ocean Ridge

6 September 2017

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Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

6 September 2017

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jModelTest 2: more models, new heuristics and parallel computing

6 September 2017

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Biogeography of bacterial communities in hot springs: a focus on the actinobacteria

6 September 2017

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Global patterns of bacterial beta-diversity in seafloor and seawater ecosystems

6 September 2017

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Rare actinomycetes: a potential storehouse for novel antibiotics

6 September 2017

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6 September 2017

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Drivers of bacterial beta-diversity depend on spatial scale

6 September 2017

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Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

6 September 2017

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Pyrosequencing reveals highly diverse and species-specific microbial communities in sponges from the Red Sea

6 September 2017

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Development of a new PCR primer system for selective amplification of Actinobacteria

6 September 2017

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Search and clustering orders of magnitude faster than BLAST

6 September 2017

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A guide to successful bioprospecting: informed by actinobacterial systematics

6 September 2017

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6 September 2017

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FastTree 2--approximately maximum-likelihood trees for large alignments

6 September 2017

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PyNAST: a flexible tool for aligning sequences to a template alignment

6 September 2017

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Bacterial diversity and biogeography in deep-sea surface sediments of the South Atlantic Ocean

6 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

Microbial biogeography of six salt lakes in Inner Mongolia, China, and a salt lake in Argentina

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

Diversity and abundance of freshwater Actinobacteria along environmental gradients in the brackish northern Baltic Sea.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

An assessment of actinobacterial diversity in the marine environment

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

A multilocus phylogeny of the Streptomyces griseus 16S rRNA gene clade: use of multilocus sequence analysis for streptomycete systematics

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

Rare actinomycete bacteria from the shallow water sediments of the Trondheim fjord, Norway: isolation, diversity and biological activity

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

Accuracy and quality of massively parallel DNA pyrosequencing

6 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

6 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

Global patterns of diversity and community structure in marine bacterioplankton.

6 September 2017

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RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

Culturable actinobacteria from the marine sponge Hymeniacidon perleve: isolation and phylogenetic diversity by 16S rRNA gene-RFLP analysis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

Diversity and biogeography of marine actinobacteria

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

Biogeographical distribution and diversity of microbes in methane hydrate-bearing deep marine sediments on the Pacific Ocean Margin

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

Microbial biogeography: putting microorganisms on the map

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

Culturable marine actinomycete diversity from tropical Pacific Ocean sediments

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

Diversity of cultivable actinobacteria in geographically widespread marine sediments.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

Review and re-analysis of domain-specific 16S primers

6 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

Statistical approaches for estimating actinobacterial diversity in marine sediments

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5002886

Bacterial diversity in hydrothermal sediment and epsilonproteobacterial dominance in experimental microcolonizers at the Mid-Atlantic Ridge

6 September 2017

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New primers for the class Actinobacteria: application to marine and terrestrial environments

6 September 2017

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Microbial diversity of hydrothermal sediments in the Guaymas Basin: evidence for anaerobic methanotrophic communities

6 September 2017

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Mycobacterium frederiksbergense sp. nov., a novel polycyclic aromatic hydrocarbon-degrading Mycobacterium species

6 September 2017

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Molecular detection of bacterial and streptomycete chitinases in the environment

6 September 2017

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6 September 2017

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6 September 2017

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6 September 2017

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6 September 2017

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Isolation of cellulolytic actinomycetes from marine sediments.

6 September 2017

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Rapid screen for bacteria degrading water-insoluble, solid hydrocarbons on agar plates.

14 September 2017

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Novel anaerobic ultramicrobacteria belonging to the Verrucomicrobiales lineage of bacterial descent isolated by dilution culture from anoxic rice paddy soil

14 September 2017

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Selective isolation and rapid identification of members of the genus Micromonospora

14 September 2017

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3 September 2018

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3 September 2018

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Distribution of the Mycobacterium community and polycyclic aromatic hydrocarbons (PAHs) among different size fractions of a long-term PAH-contaminated soil

3 September 2018

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High molecular weight polycyclic aromatic hydrocarbons in hydrothermal petroleums from the Gulf of California and Northeast Pacific Ocean

3 September 2018

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Confidence Limits on Phylogenies: an Approach using the Bootstrap

3 September 2018

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Bergey’s Manual® of Systematic Bacteriology

21 January 2018

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Methods for characterization of Streptomyces species

21 January 2018

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First active hydrothermal vents on an ultraslow-spreading center: Southwest Indian Ridge

21 January 2018

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Distribution of PAHs and the PAH-degrading bacteria in the deep-sea sediments of the high-latitude Arctic Ocean

21 January 2018

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Partialling out the Spatial Component of Ecological Variation

21 January 2018

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Hydrothermal activity along the southwest Indian ridge

21 January 2018

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Canonical Correspondence Analysis: A New Eigenvector Technique for Multivariate Direct Gradient Analysis

21 January 2018

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Degradation of prochloraz and 2,4,6-trichlorophenol by environmental bacterial strains

21 January 2018

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PubMed

https://pubmed.ncbi.nlm.nih.gov/27621725

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12 December 2020

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Identifiers

DOI

10.3389/FMICB.2016.01340

1 reference

19 August 2017

1 reference

19 August 2017

PubMed publication ID

27621725

1 reference