Unbiased RNA-protein interaction screen by quantitative proteomics. (Q37229254)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19541640%20AND%20SRC:MED&resulttype=core&format=json

31 January 2020

title

Unbiased RNA-protein interaction screen by quantitative proteomics (English)

1 reference

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31 January 2020

1 reference

1

1 reference

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31 January 2020

Mario Mörl

series ordinal

3

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31 January 2020

author name string

Marion Scheibe

series ordinal

2

1 reference

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31 January 2020

Matthias Mann

series ordinal

4

1 reference

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31 January 2020

language of work or name

English

0 references

publication date

16 June 2009

1 reference

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Proceedings of the National Academy of Sciences of the United States of America

31 January 2020

published in

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31 January 2020

volume

106

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31 January 2020

page(s)

10626-10631

1 reference

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31 January 2020

issue

26

1 reference

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A practical guide to the MaxQuant computational platform for SILAC-based quantitative proteomics

31 January 2020

cites work

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MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

6 September 2017

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Control of c-myc mRNA stability by IGF2BP1-associated cytoplasmic RNPs

6 September 2017

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A SILAC-based DNA protein interaction screen that identifies candidate binding proteins to functional DNA elements

6 September 2017

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The phosphotyrosine interactome of the insulin receptor family and its substrates IRS-1 and IRS-2.

6 September 2017

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Diverse RNA-binding proteins interact with functionally related sets of RNAs, suggesting an extensive regulatory system

6 September 2017

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Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast

6 September 2017

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6 September 2017

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High confidence determination of specific protein-protein interactions using quantitative mass spectrometry

6 September 2017

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6 September 2017

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Pyruvate kinase M2 is a phosphotyrosine-binding protein

6 September 2017

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The biological impact of mass-spectrometry-based proteomics

6 September 2017

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Identification of internal ribosome entry segment (IRES)-trans-acting factors for the Myc family of IRESs

6 September 2017

1 reference

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Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4

6 September 2017

1 reference

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Molecular composition of IMP1 ribonucleoprotein granules

6 September 2017

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6 September 2017

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Cold shock domain family members YB-1 and MSY4 share essential functions during murine embryogenesis

6 September 2017

1 reference

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Identification and classification of conserved RNA secondary structures in the human genome

6 September 2017

1 reference

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In vivo identification of ribonucleoprotein-RNA interactions

6 September 2017

1 reference

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RNA transport and local control of translation

6 September 2017

1 reference

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Processing of primary microRNAs by the Microprocessor complex

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2697111

The Microprocessor complex mediates the genesis of microRNAs

6 September 2017

1 reference

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Identification of TFB5, a new component of general transcription and DNA repair factor IIH.

6 September 2017

1 reference

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Identification of a target RNA motif for RNA-binding protein HuR.

6 September 2017

1 reference

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A novel proteomic screen for peptide-protein interactions

6 September 2017

1 reference

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A 3' exonuclease that specifically interacts with the 3' end of histone mRNA

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2697111

Mass spectrometry-based proteomics

6 September 2017

1 reference

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Stop and go extraction tips for matrix-assisted laser desorption/ionization, nanoelectrospray, and LC/MS sample pretreatment in proteomics

6 September 2017

1 reference

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Selective translation of eukaryotic mRNAs: functional molecular analysis of GRSF-1, a positive regulator of influenza virus protein synthesis

6 September 2017

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Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics

6 September 2017

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Reversible cross-linking combined with immunoprecipitation to study RNA-protein interactions in vivo

6 September 2017

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Streptavidin aptamers: affinity tags for the study of RNAs and ribonucleoproteins

6 September 2017

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Tailing and 3'-end labeling of RNA with yeast poly(A) polymerase and various nucleotides

6 September 2017

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Characterization of a beta-actin mRNA zipcode-binding protein

6 September 2017

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Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei

6 September 2017

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A simple method for 3'-labeling of RNA.

6 September 2017

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AU-rich-element-mediated upregulation of translation by FXR1 and Argonaute 2.

14 September 2017

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Expression of mouse igf2 mRNA-binding protein 3 and its implications for the developing central nervous system

14 September 2017

1 reference

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The stem-loop binding protein forms a highly stable and specific complex with the 3' stem-loop of histone mRNAs

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2697111

Stable isotope labeling by amino acids in cell culture (SILAC) and proteome quantitation of mouse embryonic stem cells to a depth of 5,111 proteins.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2697111

Functional and quantitative proteomics using SILAC

3 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0812099106

RNA -protein interaction protocols. Preface

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19541640

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12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0812099106

1 reference

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31 January 2020

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mapped directly with Wikidata item

24 November 2022

based on heuristic

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19541640%20AND%20SRC:MED&resulttype=core&format=json

31 January 2020

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