Population genomics shed light on the demographic and adaptive histories of European invasion in the Pacific oyster, Crassostrea gigas (Q37244660)

19 August 2017

Population genomics shed light on the demographic and adaptive histories of European invasion in the Pacific oyster, Crassostrea gigas (English)

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19 August 2017

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Nicolas Bierne

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Pierre Boudry

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Pierre Boudry

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author name string

Audrey Rohfritsch

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19 August 2017

Serge Heurtebise

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19 August 2017

Florence Cornette

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19 August 2017

Sylvie Lapègue

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19 August 2017

language of work or name

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24 July 2013

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full work available at URL

19 August 2017

15

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inferred from page(s)

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3804239

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21 March 2022

Evolutionary Applications

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19 August 2017

6

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19 August 2017

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19 August 2017

1064-1078

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maintained by WikiProject

19 August 2017

WikiProject Invasion Biology

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cites work

Understanding the genetic basis of invasiveness

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Pervasive selection or is it…? Why are FST outliers sometimes so frequent?

6 September 2017

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Is local selection so widespread in river organisms? Fractal geometry of river networks leads to high bias in outlier detection

6 September 2017

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The molecular basis of invasiveness: differences in gene expression of native and introduced common ragweed (Ambrosia artemisiifolia) in stressful and benign environments

6 September 2017

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Contrasting patterns of genome-wide polymorphism in the native and invasive range of the marine mollusc Crepidula fornicata

6 September 2017

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Environmental selection on transcriptome-derived SNPs in a high gene flow marine fish, the Atlantic herring (Clupea harengus).

6 September 2017

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The genetic differentiation at quantitative trait loci under local adaptation.

6 September 2017

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Increased growth in sunflower correlates with reduced defences and altered gene expression in response to biotic and abiotic stress

6 September 2017

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An objective, rapid and reproducible method for scoring AFLP peak-height data that minimizes genotyping error

6 September 2017

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Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

6 September 2017

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The coupling hypothesis: why genome scans may fail to map local adaptation genes.

6 September 2017

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Suppression substractive hybridisation (SSH) and real time PCR reveal differential gene expression in the Pacific cupped oyster, Crassostrea gigas, challenged with Ostreid herpesvirus 1.

6 September 2017

1 reference

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Detecting selection in population trees: the Lewontin and Krakauer test extended

6 September 2017

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Reconstructing routes of invasion using genetic data: why, how and so what?

6 September 2017

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Frequency of the AGT Pro11Leu polymorphism in humans: Does diet matter?

6 September 2017

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Generation and analysis of a 29,745 unique Expressed Sequence Tags from the Pacific oyster (Crassostrea gigas) assembled into a publicly accessible database: the GigasDatabase

6 September 2017

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Divergent selection and heterogeneous genomic divergence

6 September 2017

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A genome-scan method to identify selected loci appropriate for both dominant and codominant markers: a Bayesian perspective

6 September 2017

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Sequence differentiation in regions identified by a genome scan for local adaptation

6 September 2017

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High genetic variance in life-history strategies within invasive populations by way of multiple introductions

6 September 2017

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Founding events in species invasions: genetic variation, adaptive evolution, and the role of multiple introductions.

6 September 2017

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Paradox lost: genetic diversity and the success of aquatic invasions

6 September 2017

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Estimation of average heterozygosity and genetic distance from a small number of individuals

6 September 2017

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Soft sweeps III: the signature of positive selection from recurrent mutation

6 September 2017

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Adaptation and speciation: what can F(st) tell us?

6 September 2017

1 reference

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Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3804239

The identification of genes from the oyster Crassostrea gigas that are differentially expressed in progeny exhibiting opposed susceptibility to summer mortality

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3804239

Structure of amylase genes in populations of Pacific Cupped oyster ( Crassostrea gigas): tissue expression and allelic polymorphism

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3804239

Inference of population structure using multilocus genotype data

6 September 2017

1 reference

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Single-nucleotide polymorphism analysis by MALDI-TOF mass spectrometry

6 September 2017

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Primer3 on the WWW for general users and for biologist programmers

6 September 2017

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AFLP: a new technique for DNA fingerprinting

6 September 2017

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FST in a hierarchical island model

6 September 2017

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Detecting loci under selection in a hierarchically structured population

6 September 2017

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Genetic variability at neutral markers, quantitative trait land trait in a subdivided population under selection

26 June 2018

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Distribution of gene frequency as a test of the theory of the selective neutrality of polymorphisms

26 June 2018

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Gene frequency distributions as a test of selective neutrality

26 June 2018

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Letters to the editors: Lewontin-Krakauer test for neutral genes

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3804239

Identification and characterization of 18 novel polymorphic microsatellite makers derived from expressed sequence tags in the Pacific oyster Crassostrea gigas.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3804239

SNP signatures of selection on standing genetic variation and their association with adaptive phenotypes along gradients of ecological speciation in lake whitefish species pairs (Coregonus spp.).

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3804239

Parallel adaptive evolution of Atlantic cod on both sides of the Atlantic Ocean in response to temperature.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3804239

Range-wide genetic homogeneity in the California sea mussel (Mytilus californianus): a comparison of allozymes, nuclear DNA markers, and mitochondrial DNA sequences

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3804239

Natural selection influences AFLP intraspecific genetic variability and introgression patterns in Atlantic eels.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3804239

Large allele frequency differences between human continental groups are more likely to have occurred by drift during range expansions than by selection.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3804239

Single Nucleotide polymorphisms and their relationship to codon usage bias in the Pacific oyster Crassostrea gigas

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3804239

A genomic scan for divergent selection in a secondary contact zone between Atlantic and Gulf of Mexico oysters, Crassostrea virginica.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3804239

A general eco-evolutionary framework for understanding bioinvasions

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3804239

Adaptation to a steep environmental gradient and an associated barrier to gene exchange in Littorina saxatilis.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3804239

Molecular identification and expression of two non-P450 enzymes, monoamine oxidase A and flavin-containing monooxygenase 2, involved in phase I of xenobiotic biotransformation in the Pacific oyster, Crassostrea gigas

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3804239

Immune gene discovery by expressed sequence tags generated from hemocytes of the bacteria-challenged oyster, Crassostrea gigas.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3804239

Estimating population structure in diploids with multilocus dominant DNA markers.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3804239

Impact of an icy winter on the Pacific oyster (Crassostrea gigas Thunberg, 1793) populations in Scandinavia

3 September 2018

1 reference

Introduced Pacific oysters (Crassostrea gigas) in the northern Wadden Sea: invasion accelerated by warm summers?

21 January 2018

1 reference

Differential response of benthic macrofauna to the formation of novel oyster reefs (Crassostrea gigas, Thunberg) on soft and rocky substrate in the intertidal of the Bay of Brest, France

21 January 2018

1 reference

Causes and effects of a highly successful marine invasion: Case-study of the introduced Pacific oyster Crassostrea gigas in continental NW European estuaries

21 January 2018

1 reference

Massive settlements of the Pacific oyster, Crassostrea gigas, in Scandinavia

21 January 2018

1 reference

Genetic Consequences of Range Expansions

21 January 2018

1 reference

Species Invasions from Commerce in Live Aquatic Organisms: Problems and Possible Solutions

21 January 2018

1 reference

The Role of Propagule Pressure in Biological Invasions

21 January 2018

1 reference

Surfing during population expansions promotes genetic revolutions and structuration

21 January 2018

1 reference

The Fate of Mutations Surfing on the Wave of a Range Expansion

21 January 2018

1 reference

Differential gene exchange between parapatric morphs of Littorina saxatilis detected using AFLP markers

21 January 2018

1 reference

Comparing three different methods to detect selective loci using dominant markers

21 January 2018

1 reference

Variable microsatellites in the Pacific Oyster Crassostrea gigas and other cupped oyster species

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24187588

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Can AFLP genome scans detect small islands of differentiation? The case of shell sculpture variation in the periwinkle Echinolittorina hawaiiensis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24187588

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1111/EVA.12086

1 reference

19 August 2017

1 reference

19 August 2017

PubMed publication ID

24187588

1 reference