Promoter proximal pausing on genes in metazoans (Q37284766)

19 August 2017

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title

Promoter proximal pausing on genes in metazoans (English)

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19 August 2017

David S Gilmour

1

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19 August 2017

2 October 2008

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19 August 2017

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19 August 2017

118

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19 August 2017

1-10

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19 August 2017

1

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https://scigraph.springernature.com/pub.10.1007/s00412-008-0182-4

19 August 2017

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cites work

Three functional classes of transcriptional activation domain

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https://api.crossref.org/works/10.1007%2FS00412-008-0182-4

Promoting elongation with transcript cleavage stimulatory factors

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00412-008-0182-4

RNA polymerase II interacts with the promoter region of the noninduced hsp70 gene in Drosophila melanogaster cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-008-0182-4

Control of formation of two distinct classes of RNA polymerase II elongation complexes.

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00412-008-0182-4

RNA polymerase II pauses at the 5' end of the transcriptionally induced Drosophila hsp70 gene

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00412-008-0182-4

Dynamic interaction between a Drosophila transcription factor and RNA polymerase II.

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00412-008-0182-4

Structural changes in the RNA polymerase II transcription complex during transition from initiation to elongation

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00412-008-0182-4

Molecular architecture of the hsp70 promoter after deletion of the TATA box or the upstream regulation region

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00412-008-0182-4

TFIIH functions in regulating transcriptional elongation by RNA polymerase II in Xenopus oocytes

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00412-008-0182-4

Transcription regulation through promoter-proximal pausing of RNA polymerase II.

21 January 2018

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12 December 2020

Promoter elements associated with RNA Pol II stalling in the Drosophila embryo

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12 December 2020

Transcription Factor and Polymerase Recruitment, Modification, and Movement on dhsp70 In Vivo in the Minutes following Heat Shock

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12 December 2020

Molecular cloning and analysis of two subunits of the human TFIID complex: hTAFII130 and hTAFII100

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12 December 2020

Short transcripts of the ternary complex provide insight into RNA polymerase II elongational pausing.

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12 December 2020

Transcription on nucleosomal templates by RNA polymerase II in vitro: inhibition of elongation with enhancement of sequence-specific pausing.

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12 December 2020

Thinking quantitatively about transcriptional regulation.

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12 December 2020

Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit.

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12 December 2020

Mediator, not holoenzyme, is directly recruited to the heat shock promoter by HSF upon heat shock

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12 December 2020

Poised RNA polymerase II gives pause for thought

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12 December 2020

P-TEFb is critical for the maturation of RNA polymerase II into productive elongation in vivo

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12 December 2020

Hepatitis delta antigen binds to the clamp of RNA polymerase II and affects transcriptional fidelity

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12 December 2020

Attenuation of estrogen receptor alpha-mediated transcription through estrogen-stimulated recruitment of a negative elongation factor

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12 December 2020

Protein traffic on the heat shock promoter: parking, stalling, and trucking along

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12 December 2020

Transcriptional activation domains of human heat shock factor 1 recruit human SWI/SNF

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12 December 2020

Mediator requirement for both recruitment and postrecruitment steps in transcription initiation

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12 December 2020

Disruption of downstream chromatin directed by a transcriptional activator

1 reference

12 December 2020

DSIF, a novel transcription elongation factor that regulates RNA polymerase II processivity, is composed of human Spt4 and Spt5 homologs

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12 December 2020

Nucleosome organization in the Drosophila genome.

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12 December 2020

Efficient release from promoter-proximal stall sites requires transcript cleavage factor TFIIS.

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12 December 2020

Functional interactions of RNA-capping enzyme with factors that positively and negatively regulate promoter escape by RNA polymerase II

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12 December 2020

Polycomb silencing blocks transcription initiation.

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12 December 2020

Human transcription elongation factor NELF: identification of novel subunits and reconstitution of the functionally active complex

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12 December 2020

Promoter melting and TFIID complexes on Drosophila genes in vivo

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12 December 2020

Dual functions of largest NURF subunit NURF301 in nucleosome sliding and transcription factor interactions.

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12 December 2020

Localized recruitment of a chromatin-remodeling activity by an activator in vivo drives transcriptional elongation

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12 December 2020

NELF and DSIF cause promoter proximal pausing on the hsp70 promoter in Drosophila

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12 December 2020

RNA emerging from the active site of RNA polymerase II interacts with the Rpb7 subunit

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12 December 2020

Negative elongation factor NELF represses human immunodeficiency virus transcription by pausing the RNA polymerase II complex

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12 December 2020

Increased accommodation of nascent RNA in a product site on RNA polymerase II during arrest

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12 December 2020

Transcriptional activation domains stimulate initiation and elongation at different times and via different residues

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12 December 2020

A chromatin landmark and transcription initiation at most promoters in human cells

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12 December 2020

RNA polymerase is poised for activation across the genome

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12 December 2020

Poised polymerases: on your mark...get set...go!

1 reference

12 December 2020

Single-molecule tracking of mRNA exiting from RNA polymerase II

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12 December 2020

NELF, a multisubunit complex containing RD, cooperates with DSIF to repress RNA polymerase II elongation

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12 December 2020

Elongation by RNA polymerase II: the short and long of it

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12 December 2020

NELF-mediated stalling of Pol II can enhance gene expression by blocking promoter-proximal nucleosome assembly

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12 December 2020

Activator-dependent regulation of transcriptional pausing on nucleosomal templates

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12 December 2020

Genomic location of the human RNA polymerase II general machinery: evidence for a role of TFIIF and Rpb7 at both early and late stages of transcription

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12 December 2020

Transcription factors that activate the Ultrabithorax promoter in developmentally staged extracts

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12 December 2020

Evidence that negative elongation factor represses transcription elongation through binding to a DRB sensitivity-inducing factor/RNA polymerase II complex and RNA.

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12 December 2020

Phosphorylation of histone H3 at Ser10 facilitates RNA polymerase II release from promoter-proximal pausing in Drosophila

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12 December 2020

The RNA polymerase II molecule at the 5' end of the uninduced hsp70 gene of D. melanogaster is transcriptionally engaged.

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12 December 2020

The Drosophila BRM complex facilitates global transcription by RNA polymerase II

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12 December 2020

Elongation inhibition by DRB sensitivity-inducing factor is regulated by the A20 promoter via a novel negative element and NF-kappaB.

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12 December 2020

NELF and GAGA factor are linked to promoter-proximal pausing at many genes in Drosophila

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12 December 2020

Transcription termination factor Pcf11 limits the processivity of Pol II on an HIV provirus to repress gene expression

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12 December 2020

Regulation of p53 target gene expression by peptidylarginine deiminase 4

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12 December 2020

RNA polymerase II-mediated transcription at active loci does not require histone H3S10 phosphorylation in Drosophila

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12 December 2020

In vivo transcriptional pausing and cap formation on three Drosophila heat shock genes

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12 December 2020

HSF access to heat shock elements in vivo depends critically on promoter architecture defined by GAGA factor, TFIID, and RNA polymerase II binding sites

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12 December 2020

Promoter-associated pausing in promoter architecture and postinitiation transcriptional regulation

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12 December 2020

Identification in vivo of different rate-limiting steps associated with transcriptional activators in the presence and absence of a GAGA element

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12 December 2020

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12 December 2020

Controlling the elongation phase of transcription with P-TEFb

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12 December 2020

A negative elongation factor for human RNA polymerase II inhibits the anti-arrest transcript-cleavage factor TFIIS.

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12 December 2020

Regulation of clustered gene expression by cofactor of BRCA1 (COBRA1) in breast cancer cells

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12 December 2020

Architecture of the RNA polymerase II-TFIIS complex and implications for mRNA cleavage

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12 December 2020

Drosophila GAGA factor directs histone H3.3 replacement that prevents the heterochromatin spreading

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12 December 2020

Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci

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12 December 2020

TFIID sequence recognition of the initiator and sequences farther downstream in Drosophila class II genes.

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12 December 2020

NELF-E RRM undergoes major structural changes in flexible protein regions on target RNA binding

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12 December 2020

Flavopiridol inactivates P-TEFb and blocks most RNA polymerase II transcription in vivo

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12 December 2020

Transcription elongation controls cell fate specification in the Drosophila embryo

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12 December 2020

DNA sequence requirements for generating paused polymerase at the start of hsp70

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12 December 2020

NELF interacts with CBC and participates in 3' end processing of replication-dependent histone mRNAs.

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12 December 2020

The RNA polymerase II core promoter

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12 December 2020

Cooperative and competitive protein interactions at the hsp70 promoter.

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12 December 2020

Nucleosomes can form a polar barrier to transcript elongation by RNA polymerase II

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12 December 2020

Stimulation of RNA polymerase II elongation by hepatitis delta antigen

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12 December 2020

The general transcription factors of RNA polymerase II

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12 December 2020

Transcription factor TFIID recognizes DNA sequences downstream of the TATA element in the Hsp70 heat shock gene

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12 December 2020

Purification of P-TEFb, a transcription factor required for the transition into productive elongation.

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12 December 2020

Transcriptional pausing caused by NELF plays a dual role in regulating immediate-early expression of the junB gene

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12 December 2020

Analysis of polymerase II elongation complexes by native gel electrophoresis. Evidence for a novel carboxyl-terminal domain-mediated termination mechanism.

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12 December 2020

P-TEFb-mediated phosphorylation of hSpt5 C-terminal repeats is critical for processive transcription elongation

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12 December 2020

Transcriptional activation by GAGA factor is through its direct interaction with dmTAF3.

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12 December 2020

Molecular characterization of Drosophila NELF

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12 December 2020

RNA polymerase II transcription complexes may become arrested if the nascent RNA is shortened to less than 50 nucleotides

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12 December 2020

Promoter-proximal pausing of RNA polymerase II defines a general rate-limiting step after transcription initiation

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12 December 2020

A highly purified RNA polymerase II elongation control system

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12 December 2020

RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo

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12 December 2020

Mammalian SWI-SNF complexes contribute to activation of the hsp70 gene

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12 December 2020

Properties of RNA polymerase II elongation complexes before and after the P-TEFb-mediated transition into productive elongation.

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12 December 2020

Nucleosomes are not necessary for promoter-proximal pausing in vitro on the Drosophila hsp70 promoter

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12 December 2020

10.1007/S00412-008-0182-4

Identifiers

DOI

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19 August 2017

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PubMed ID

18830703