R/Bioconductor software for Illumina's Infinium whole-genome genotyping BeadChips. (Q37364208)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19661241%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

title

R/Bioconductor software for Illumina's Infinium whole-genome genotyping BeadChips (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19661241%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

main subject

software

0 references

whole genome sequencing

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19661241%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

Benilton Carvalho

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19661241%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

5

Rafael A Irizarry

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19661241%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

author name string

Kurt N Hetrick

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19661241%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

Simon Tavaré

series ordinal

4

1 reference

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4 February 2020

language of work or name

English

0 references

publication date

6 August 2009

1 reference

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4 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19661241%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

volume

25

1 reference

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4 February 2020

issue

19

1 reference

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4 February 2020

page(s)

2621-2623

1 reference

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Normalization of Illumina Infinium whole-genome SNP data improves copy number estimates and allelic intensity ratios

4 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2752620

Microarray technology and applications in the arena of genome-wide association.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2752620

lumi: a pipeline for processing Illumina microarray

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2752620

Validation and extension of an empirical Bayes method for SNP calling on Affymetrix microarrays

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2752620

A second generation human haplotype map of over 3.1 million SNPs

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2752620

beadarray: R classes and methods for Illumina bead-based data.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2752620

A multi-array multi-SNP genotyping algorithm for Affymetrix SNP microarrays.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2752620

High-resolution copy number analysis of paraffin-embedded archival tissue using SNP BeadArrays.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2752620

Exploration, normalization, and genotype calls of high-density oligonucleotide SNP array data

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2752620

Bioconductor: open software development for computational biology and bioinformatics

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2752620

BASH: a tool for managing BeadArray spatial artefacts

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2752620

A genotype calling algorithm for the Illumina BeadArray platform

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2752620

GenoSNP: a variational Bayes within-sample SNP genotyping algorithm that does not require a reference population.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2752620

Whole-genome genotyping with the single-base extension assay

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2752620

A genotype calling algorithm for affymetrix SNP arrays.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2752620

Automatic registration of microarray images. II. Hexagonal grid

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2752620

SNiPer-HD: improved genotype calling accuracy by an expectation-maximization algorithm for high-density SNP arrays

2 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19661241

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/BIOINFORMATICS/BTP470

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19661241%20AND%20SRC:MED&resulttype=core&format=json

journals/bioinformatics/RitchieCHTI09

4 February 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19661241%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

PubMed publication ID

19661241

1 reference