Hybridization modeling of oligonucleotide SNP arrays for accurate DNA copy number estimation. (Q37385838)

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2 February 2020

title

Hybridization modeling of oligonucleotide SNP arrays for accurate DNA copy number estimation (English)

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2 February 2020

6

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2 February 2020

author name string

Lin Wan

1

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2 February 2020

Kelian Sun

2

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2 February 2020

Qi Ding

3

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2 February 2020

Yuehua Cui

4

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2 February 2020

Ming Li

5

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2 February 2020

Robert C Elston

7

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2 February 2020

Minping Qian

8

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2 February 2020

Wenjiang J Fu

9

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2 February 2020

language of work or name

English

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publication date

7 July 2009

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2 February 2020

published in

Nucleic Acids Research

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2 February 2020

volume

37

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2 February 2020

issue

17

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2 February 2020

page(s)

e117

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Cross-hybridization modeling on Affymetrix exon arrays.

2 February 2020

cites work

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6 September 2017

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Integrated genotype calling and association analysis of SNPs, common copy number polymorphisms and rare CNVs

6 September 2017

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Integrated detection and population-genetic analysis of SNPs and copy number variation

6 September 2017

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6 September 2017

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6 September 2017

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6 September 2017

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A multi-array multi-SNP genotyping algorithm for Affymetrix SNP microarrays.

6 September 2017

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Exploration, normalization, and genotype calls of high-density oligonucleotide SNP array data

6 September 2017

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Free energy of DNA duplex formation on short oligonucleotide microarrays

6 September 2017

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Global variation in copy number in the human genome

6 September 2017

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Non-linear analysis of GeneChip arrays

6 September 2017

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Model-based analysis of tiling-arrays for ChIP-chip.

6 September 2017

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PLASQ: a generalized linear model-based procedure to determine allelic dosage in cancer cells from SNP array data

6 September 2017

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CARAT: a novel method for allelic detection of DNA copy number changes using high density oligonucleotide arrays

6 September 2017

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Allele-specific amplification in cancer revealed by SNP array analysis

6 September 2017

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High-resolution identification of chromosomal abnormalities using oligonucleotide arrays containing 116,204 SNPs

6 September 2017

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Modeling of DNA microarray data by using physical properties of hybridization

6 September 2017

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A model of molecular interactions on short oligonucleotide microarrays

6 September 2017

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A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

6 September 2017

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Model-based analysis of oligonucleotide arrays: expression index computation and outlier detection

6 September 2017

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6 September 2017

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14 September 2017

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26 June 2018

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A genotype calling algorithm for affymetrix SNP arrays.

2 September 2018

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Dynamic model based algorithms for screening and genotyping over 100 K SNPs on oligonucleotide microarrays

2 September 2018

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2 September 2018

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2 September 2018

Identifiers

DOI

10.1093/NAR/GKP559

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19586935%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

1 reference

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2 February 2020

PubMed publication ID

19586935

1 reference