Dynamic proteomics emphasizes the importance of selective mRNA translation and protein turnover during Arabidopsis seed germination. (Q37428838)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24198433%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

title

Dynamic proteomics emphasizes the importance of selective mRNA translation and protein turnover during Arabidopsis seed germination (English)

1 reference

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29 February 2020

1 reference

3

1 reference

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29 February 2020

Loic Rajjou

6

1 reference

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29 February 2020

5

Dominique Job

1 reference

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29 February 2020

author name string

Marc Galland

1

1 reference

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29 February 2020

Romain Huguet

2

1 reference

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29 February 2020

Gwendal Cueff

4

1 reference

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29 February 2020

publication date

6 November 2013

1 reference

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Molecular & Cellular Proteomics

29 February 2020

published in

1 reference

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29 February 2020

volume

13

1 reference

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29 February 2020

issue

1

1 reference

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29 February 2020

page(s)

252-268

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OsLEA3-2, an abiotic stress induced gene of rice plays a key role in salt and drought tolerance

29 February 2020

cites work

1 reference

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Reboot the system thanks to protein post-translational modifications and proteome diversity: How quiescent seeds restart their metabolism to prepare seedling establishment.

23 August 2017

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First off the mark: early seed germination

23 August 2017

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23 August 2017

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Arabidopsis seed secrets unravelled after a decade of genetic and omics-driven research.

23 August 2017

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Plastidial glycolysis in developing Arabidopsis embryos.

23 August 2017

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Ribosome and transcript copy numbers, polysome occupancy and enzyme dynamics in Arabidopsis.

23 August 2017

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Evidence for the Existence in Arabidopsis thaliana of the Proteasome Proteolytic Pathway: ACTIVATION IN RESPONSE TO CADMIUM

23 August 2017

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23 August 2017

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23 August 2017

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Nitrile-specifier proteins involved in glucosinolate hydrolysis in Arabidopsis thaliana

23 August 2017

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From intracellular signaling networks to cell death: the dual role of reactive oxygen species in seed physiology

23 August 2017

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23 August 2017

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23 August 2017

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23 August 2017

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23 August 2017

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23 August 2017

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23 August 2017

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23 August 2017

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23 August 2017

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23 August 2017

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23 August 2017

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One-carbon metabolism in plants. Regulation of tetrahydrofolate synthesis during germination and seedling development

23 August 2017

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23 August 2017

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Ascorbic acid: much more than just an antioxidant.

23 August 2017

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MYB61 is required for mucilage deposition and extrusion in the Arabidopsis seed coat

23 August 2017

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An mRNA cap binding protein, ABH1, modulates early abscisic acid signal transduction in Arabidopsis

23 August 2017

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Proteomic analysis of arabidopsis seed germination and priming

23 August 2017

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A postgermination developmental arrest checkpoint is mediated by abscisic acid and requires the ABI5 transcription factor in Arabidopsis

23 August 2017

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Molecular cloning and functional expression of rat liver glutathione-dependent dehydroascorbate reductase

23 August 2017

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The specific features of methionine biosynthesis and metabolism in plants.

23 August 2017

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23 August 2017

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Poly(dAT) dependent trinucleotide synthesis catalysed by wheat germ RNA polymerase II. Effects of nucleotide substrates and cordycepin triphosphate

23 August 2017

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23 August 2017

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Functional analysis of the group 4 late embryogenesis abundant proteins reveals their relevance in the adaptive response during water deficit in Arabidopsis

23 August 2017

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Identification and characterization of a plastid-localized Arabidopsis glyoxylate reductase isoform: comparison with a cytosolic isoform and implications for cellular redox homeostasis and aldehyde detoxification

9 September 2017

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Arabidopsis Cys2/His2-type zinc-finger proteins function as transcription repressors under drought, cold, and high-salinity stress conditions

9 September 2017

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9 September 2017

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Germination variation in Arabidopsis thaliana accessions under moderate osmotic and salt stresses

9 September 2017

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Overexpression of AtLEA3-3 confers resistance to cold stress in Escherichia coli and provides enhanced osmotic stress tolerance and ABA sensitivity in Arabidopsis thaliana

9 September 2017

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Glyoxylate reductase isoform 1 is localized in the cytosol and not peroxisomes in plant cells

14 September 2017

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Degradation of seed mucilage by soil microflora promotes early seedling growth of a desert sand dune plant

14 September 2017

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The immunoproteasome, the 20S proteasome and the PA28αβ proteasome regulator are oxidative-stress-adaptive proteolytic complexes.

14 September 2017

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LOS2, a genetic locus required for cold-responsive gene transcription encodes a bi-functional enolase

14 September 2017

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Ascorbic acid and reactive oxygen species are involved in the inhibition of seed germination by abscisic acid in rice seeds

14 September 2017

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Genetic and molecular identification of genes required for female gametophyte development and function in Arabidopsis.

26 June 2018

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Interactions between serine acetyltransferase and O-acetylserine (thiol) lyase in higher plants--structural and kinetic properties of the free and bound enzymes

26 June 2018

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Molecular cloning, genomic organization, expression and evolution of 12S seed storage protein genes of Arabidopsis thaliana

26 June 2018

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Transcriptional dynamics of two seed compartments with opposing roles in Arabidopsis seed germination

2 September 2018

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RRP41L, a putative core subunit of the exosome, plays an important role in seed germination and early seedling growth in Arabidopsis.

2 September 2018

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The cyclophilin ROC1 links phytochrome and cryptochrome to brassinosteroid sensitivity.

2 September 2018

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In-depth temporal transcriptome profiling reveals a crucial developmental switch with roles for RNA processing and organelle metabolism that are essential for germination in Arabidopsis

2 September 2018

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Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice

2 September 2018

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Targeted mRNA oxidation regulates sunflower seed dormancy alleviation during dry after-ripening.

2 September 2018

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A mitochondrial GABA permease connects the GABA shunt and the TCA cycle, and is essential for normal carbon metabolism.

2 September 2018

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Distinct roles of protein disulfide isomerase and P5 sulfhydryl oxidoreductases in multiple pathways for oxidation of structurally diverse storage proteins in rice.

2 September 2018

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Arabidopsis 3-ketoacyl-CoA thiolase-2 (KAT2), an enzyme of fatty acid β-oxidation, is involved in ABA signal transduction

2 September 2018

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The cell-free protein synthesis system from wheat germ

2 September 2018

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Stored and neosynthesized mRNA in Arabidopsis seeds: effects of cycloheximide and controlled deterioration treatment on the resumption of transcription during imbibition

2 September 2018

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Genome-wide analysis of endogenous abscisic acid-mediated transcription in dry and imbibed seeds of Arabidopsis using tiling arrays

2 September 2018

1 reference

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Analysis of Natural Allelic Variation Controlling Arabidopsis thaliana Seed Germinability in Response to Cold and Dark: Identification of Three Major Quantitative Trait Loci

2 September 2018

1 reference

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Vacuolar processing enzyme plays an essential role in the crystalline structure of glutelin in rice seed

2 September 2018

1 reference

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Germination of Arabidopsis thaliana seeds is not completed as a result of elongation of the radicle but of the adjacent transition zone and lower hypocotyl.

2 September 2018

1 reference

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Molecular and functional characterization of the plastid-localized Phosphoenolpyruvate enolase (ENO1) from Arabidopsis thaliana

2 September 2018

1 reference

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NAI2 is an endoplasmic reticulum body component that enables ER body formation in Arabidopsis thaliana.

2 September 2018

1 reference

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Arabidopsis protein disulfide isomerase-5 inhibits cysteine proteases during trafficking to vacuoles before programmed cell death of the endothelium in developing seeds

2 September 2018

1 reference

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Proteome-wide characterization of seed aging in Arabidopsis: a comparison between artificial and natural aging protocols.

2 September 2018

1 reference

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Genome-scale proteomics reveals Arabidopsis thaliana gene models and proteome dynamics.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

A subtilisin-like serine protease essential for mucilage release from Arabidopsis seed coats

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

Analysis of the Arabidopsis O-acetylserine(thiol)lyase gene family demonstrates compartment-specific differences in the regulation of cysteine synthesis

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

MONODEHYROASCORBATE REDUCTASE4 is required for seed storage oil hydrolysis and postgerminative growth in Arabidopsis

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

Arabidopsis seed development and germination is associated with temporally distinct metabolic switches.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

The Arabidopsis HOMOLOGY-DEPENDENT GENE SILENCING1 gene codes for an S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

The role of the cell cycle machinery in resumption of postembryonic development.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

Reserve mobilization in the Arabidopsis endosperm fuels hypocotyl elongation in the dark, is independent of abscisic acid, and requires PHOSPHOENOLPYRUVATE CARBOXYKINASE1.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

NAI1 gene encodes a basic-helix-loop-helix-type putative transcription factor that regulates the formation of an endoplasmic reticulum-derived structure, the ER body

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

Analysis of natural allelic variation of Arabidopsis seed germination and seed longevity traits between the accessions Landsberg erecta and Shakdara, using a new recombinant inbred line population

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

The effect of alpha-amanitin on the Arabidopsis seed proteome highlights the distinct roles of stored and neosynthesized mRNAs during germination.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

Catalase activity and expression in developing sunflower seeds as related to drying.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

Storage protein accumulation in the absence of the vacuolar processing enzyme family of cysteine proteases

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

The gluconeogenic enzyme phosphoenolpyruvate carboxykinase in Arabidopsis is essential for seedling establishment

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

Investigating the regulation of one-carbon metabolism in Arabidopsis thaliana

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

Variation of glucosinolate accumulation among different organs and developmental stages of Arabidopsis thaliana

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

A novel ER-derived compartment, the ER body, selectively accumulates a beta-glucosidase with an ER-retention signal in Arabidopsis

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

Both vegetative and reproductive actin isovariants complement the stunted root hair phenotype of the Arabidopsis act2-1 mutation.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

Genetic and physiological analysis of germination efficiency in maize in relation to nitrogen metabolism reveals the importance of cytosolic glutamine synthetase

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

Importance of methionine biosynthesis for Arabidopsis seed germination and seedling growth.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

The use of multiple transcription starts causes the dual targeting of Arabidopsis putative monodehydroascorbate reductase to both mitochondria and chloroplasts

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

The rice mutant esp2 greatly accumulates the glutelin precursor and deletes the protein disulfide isomerase

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

Composition and content of glucosinolates in developing Arabidopsis thaliana

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

Pyk10, a seedling and root specific gene and promoter from Arabidopsis thaliana.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

Characterization of the cyclophilin gene family of Arabidopsis thaliana and phylogenetic analysis of known cyclophilin proteins

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879618

Unravelling the complex trait of seed quality: using natural variation through a combination of physiology, genetics and -omics technologies

2 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1074%2FMCP.M113.032227

TM4 microarray software suite

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1074%2FMCP.M113.032227

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M113.032227

Protein Synthesis in Imbibing Wheat Embryos

21 January 2018

1 reference

12 December 2020

The zinc-finger protein Zat12 plays a central role in reactive oxygen and abiotic stress signaling in Arabidopsis

1 reference

12 December 2020

Metabolite profiling of Arabidopsis seedlings in response to exogenous sinalbin and sulfur deficiency

1 reference

12 December 2020

Ferritins control interaction between iron homeostasis and oxidative stress in Arabidopsis

1 reference

12 December 2020

Post-translational regulation of AtFER2 ferritin in response to intracellular iron trafficking during fruit development in Arabidopsis

1 reference

12 December 2020

Mechanisms to account for maintenance of the soluble methionine pool in transgenic Arabidopsis plants expressing antisense cystathionine gamma-synthase cDNA

1 reference

12 December 2020

Proteomics and posttranslational proteomics of seed dormancy and germination

1 reference

12 December 2020

Transgenic potato plants reveal the indispensable role of cystathionine beta-lyase in plant growth and development

1 reference

12 December 2020

Proteomic analysis of embryonic proteins synthesized from long-lived mRNAs during germination of rice seeds

1 reference

12 December 2020

Proteomics reveals potential biomarkers of seed vigor in sugarbeet

1 reference

12 December 2020

Synthesis of ribosomal proteins from stored mRNAs early in seed germination

1 reference

12 December 2020

Seed Germination and Dormancy

1 reference

12 December 2020

Patterns of protein oxidation in Arabidopsis seeds and during germination.

1 reference

12 December 2020

A gain-of-function mutation in the ROC1 gene alters plant architecture in Arabidopsis

1 reference

12 December 2020

Proteomic investigation of the effect of salicylic acid on Arabidopsis seed germination and establishment of early defense mechanisms

1 reference

12 December 2020

Arabidopsis actin gene ACT7 plays an essential role in germination and root growth

1 reference

12 December 2020

Cell division and subsequent radicle protrusion in tomato seeds are inhibited by osmotic stress but DNA synthesis and formation of microtubular cytoskeleton are not

1 reference

12 December 2020

LONG-LIVED MESSENGER RNA: EVIDENCE FROM COTTON SEED GERMINATION

1 reference

12 December 2020

Overexpression of microRNA395c or 395e affects differently the seed germination of Arabidopsis thaliana under stress conditions

1 reference

12 December 2020

Structure and function of a mitochondrial late embryogenesis abundant protein are revealed by desiccation

1 reference

12 December 2020

The effect of the suspensor and gibberellic acid on Phaseolus vulgaris embryo protein synthesis

1 reference

12 December 2020

Identifiers

DOI

10.1074/MCP.M113.032227

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24198433%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24198433%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

PubMed publication ID

24198433

1 reference