Current applications and future trends of molecular diagnostics in clinical bacteriology (Q37450875)

20 August 2017

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title

Current applications and future trends of molecular diagnostics in clinical bacteriology (English)

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20 August 2017

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Jan Weile

1

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20 August 2017

Cornelius Knabbe

series ordinal

2

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20 August 2017

language of work or name

English

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publication date

18 April 2009

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Analytical and Bioanalytical Chemistry

20 August 2017

published in

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20 August 2017

volume

394

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20 August 2017

issue

3

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20 August 2017

page(s)

731-742

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Clinical role and importance of fluorescence in situ hybridization method in diagnosis of H pylori infection and determination of clarithromycin resistance in H pylori eradication therapy

20 August 2017

cites work

1 reference

https://api.crossref.org/works/10.1007%2FS00216-009-2779-8

Single-run, parallel detection of DNA from three pneumonia-producing bacteria by real-time polymerase chain reaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00216-009-2779-8

Quantitation of Pseudomonas aeruginosa in wound biopsy samples: from bacterial culture to rapid 'real-time' polymerase chain reaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00216-009-2779-8

Rapid diagnostics for methicillin-resistant Staphylococcus aureus: current status

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00216-009-2779-8

Use of pyrosequencing of 16S rRNA fragments to differentiate between bacteria responsible for neonatal sepsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00216-009-2779-8

A single nucleotide polymorphism identification assay for the genotypic characterisation of Neisseria meningitidis using MALDI-TOF mass spectrometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00216-009-2779-8

A technological update of molecular diagnostics for infectious diseases

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00216-009-2779-8

Comparison of molecular assays for detection and typing of human papillomavirus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00216-009-2779-8

Usefulness of the MicroSeq 500 16S ribosomal DNA-based bacterial identification system for identification of clinically significant bacterial isolates with ambiguous biochemical profiles

21 January 2018

1 reference

12 December 2020

Real-time PCR in clinical microbiology: applications for routine laboratory testing

1 reference

12 December 2020

DNA microarray-based genotyping of methicillin-resistant Staphylococcus aureus strains from Eastern Saxony

1 reference

12 December 2020

Validation of the line-probe assay for rapid detection of rifampicin-resistant Mycobacterium tuberculosis in Vietnam.

1 reference

12 December 2020

Development of a novel microfluidic immunoassay for the detection of Helicobacter pylori infection

1 reference

12 December 2020

New developments in the diagnosis of bloodstream infections

1 reference

12 December 2020

Molecular detection of antimicrobial resistance

1 reference

12 December 2020

Nanoparticles, molecular biosensors, and multispectral confocal microscopy

1 reference

12 December 2020

Rapid detection of Panton-Valentine leukocidin from clinical isolates of Staphylococcus aureus strains by real-time PCR.

1 reference

12 December 2020

Targeted high-throughput sequencing of tagged nucleic acid samples

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12 December 2020

Innovations in optical microfluidic technologies for point-of-care diagnostics

1 reference

12 December 2020

[Evaluation of the INNO-LiPA MYCOBACTERIA v2 for mycobacterial identification].

1 reference

12 December 2020

Entirely automated quantification of human immunodeficiency virus type 1 (HIV-1) RNA in plasma by using the ultrasensitive COBAS AMPLICOR HIV-1 monitor test and RNA purification on the MagNA pure LC instrument

1 reference

12 December 2020

Rapid diagnosis of bacteremia by universal amplification of 23S ribosomal DNA followed by hybridization to an oligonucleotide array

1 reference

12 December 2020

Cytomegalovirus DNA measurement in blood and plasma using Roche LightCycler CMV quantification reagents

1 reference

12 December 2020

Design of a 5' exonuclease-based real-time PCR assay for simultaneous detection of Bacillus licheniformis, members of the 'B. cereus group' and B. fumarioli in gelatine

1 reference

12 December 2020

Biofunctional magnetic nanoparticles for protein separation and pathogen detection

1 reference

12 December 2020

Multiplex real-time PCR assay using Scorpion probes and DNA capture for genotype-specific detection of Giardia lamblia on fecal samples

1 reference

12 December 2020

Performance assessment of two commercial amplification assays for direct detection of Mycobacterium tuberculosis complex from respiratory and extrapulmonary specimens

1 reference

12 December 2020

rpoB gene sequence-based identification of aerobic Gram-positive cocci of the genera Streptococcus, Enterococcus, Gemella, Abiotrophia, and Granulicatella

1 reference

12 December 2020

Multiple human papillomavirus infection and high grade cervical intraepithelial neoplasia among women with cytological diagnosis of atypical squamous cells of undetermined significance or low grade squamous intraepithelial lesions

1 reference

12 December 2020

DNA microarray for genotyping multidrug-resistant Pseudomonas aeruginosa clinical isolates

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12 December 2020

Pyrosequencing: sequence typing at the speed of light.

1 reference

12 December 2020

Evaluation of two real-time polymerase chain reaction pathogen detection kits for Salmonella spp. in food.

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12 December 2020

Microfluidic applications for disposable diagnostics

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12 December 2020

A multiplexed protein microarray for the simultaneous serodiagnosis of human immunodeficiency virus/hepatitis C virus infection and typing of whole blood.

1 reference

12 December 2020

Evaluation of the Xpert methicillin-resistant Staphylococcus aureus (MRSA) assay using the GeneXpert real-time PCR platform for rapid detection of MRSA from screening specimens

1 reference

12 December 2020

Multiplexed whole bacterial antigen microarray, a new format for the automation of serodiagnosis: the culture-negative endocarditis paradigm

1 reference

12 December 2020

PNA FISH: an intelligent stain for rapid diagnosis of infectious diseases

1 reference

12 December 2020

Severity of meningococcal disease associated with genomic bacterial load

1 reference

12 December 2020

Use of Gen-Probe AccuProbe Group B streptococcus test to detect group B streptococci in broth cultures of vaginal-anorectal specimens from pregnant women: comparison with traditional culture method

1 reference

12 December 2020

Nano-biosensor development for bacterial detection during human kidney infection: use of glycoconjugate-specific antibody-bound gold NanoWire arrays (GNWA).

1 reference

12 December 2020

Nanoparticle-Based biobarcode amplification assay (BCA) for sensitive and early detection of human immunodeficiency type 1 capsid (p24) antigen.

1 reference

12 December 2020

Immunoassay of infectious agents

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12 December 2020

Rapid detection and identification of bacterial pathogens using novel molecular technologies: infection control and beyond

1 reference

12 December 2020

Interactions among strategies associated with bacterial infection: pathogenicity, epidemicity, and antibiotic resistance

1 reference

12 December 2020

Antibacterial resistance worldwide: causes, challenges and responses

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12 December 2020

Detection of cytomegalovirus DNA in human specimens by LightCycler PCR.

1 reference

12 December 2020

Eight-plex PCR and liquid-array detection of bacterial and viral pathogens in cerebrospinal fluid from patients with suspected meningitis

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12 December 2020

Sequential analysis of biomarkers in cerebrospinal fluid and serum during invasive meningococcal disease.

1 reference

12 December 2020

16S Ribosomal RNA Sequence—Based Identification of Veterinary Clinical Bacteria

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12 December 2020

Comparing first-void urine specimens, self-collected vaginal swabs, and endocervical specimens to detect Chlamydia trachomatis and Neisseria gonorrhoeae by a nucleic acid amplification test

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12 December 2020

DNA microarrays in the clinic: infectious diseases.

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12 December 2020

The year of sequencing.

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12 December 2020

Early detection of Pseudomonas aeruginosa--comparison of conventional versus molecular (PCR) detection directly from adult patients with cystic fibrosis (CF)

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12 December 2020

DNA microarrays as salivary diagnostic tools for characterizing the oral cavity's microbial community

1 reference

12 December 2020

Comparison of the Roche LightCycler vanA/vanB detection assay and culture for detection of vancomycin-resistant enterococci from perianal swabs

1 reference

12 December 2020

Comparison of an internally controlled, large-volume LightCycler assay for detection of Mycobacterium tuberculosis in clinical samples with the COBAS AMPLICOR assay

1 reference

12 December 2020

Early diagnosis of lower respiratory tract infections (point-of-care tests).

1 reference

12 December 2020

Comparison of the Luminex xTAG respiratory viral panel with in-house nucleic acid amplification tests for diagnosis of respiratory virus infections

1 reference

12 December 2020

Rapid diagnosis of bacterial meningitis using a microarray

1 reference

12 December 2020

A molecular beacon-based real-time NASBA assay for detection of Mycobacterium avium subsp. paratuberculosis in water and milk

1 reference

12 December 2020

Sequence census methods for functional genomics

1 reference

12 December 2020

Point detection of pathogens in oral samples

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12 December 2020

An integrated digital microfluidic lab-on-a-chip for clinical diagnostics on human physiological fluids

1 reference

12 December 2020

Comparison of assurance gold salmonella EIA, BAX for screening/Salmonella, and GENE-TRAK Salmonella DLP rapid assays for detection of Salmonella in alfalfa sprouts and sprout irrigation water.

1 reference

12 December 2020

Use of DNA microarrays for rapid genotyping of TEM beta-lactamases that confer resistance

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12 December 2020

xTAG RVP assay: analytical and clinical performance

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12 December 2020

New microbiology tools for public health and their implications

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12 December 2020

Nucleic acid sequence based amplification for the rapid and sensitive detection of Salmonella enterica from foods

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12 December 2020

Effects of rapid detection of bloodstream infections on length of hospitalization and hospital charges.

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12 December 2020

Utility of DNA microarrays for detection of viruses in acute respiratory tract infections in children

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12 December 2020

Integrating genomics against infectious disease

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12 December 2020

Molecular biology: power sequencing.

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12 December 2020

Analytical evaluation of the PapilloCheck test, a new commercial DNA chip for detection and genotyping of human papillomavirus

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12 December 2020

Towards non- and minimally instrumented, microfluidics-based diagnostic devices

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12 December 2020

Broad-range bacterial detection and the analysis of unexplained death and critical illness

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12 December 2020

Highly parallel genomic assays

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12 December 2020

Microchip-based cell analysis and clinical diagnosis system

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12 December 2020

Molecular methods for identification and detection of bacterial food pathogens.

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12 December 2020

Selective isolation of bacterial DNA from human clinical specimens.

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12 December 2020

Evaluation of real-time PCR for detection of and discrimination between Bordetella pertussis, Bordetella parapertussis, and Bordetella holmesii for clinical diagnosis

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12 December 2020

Sensitive quantitative detection of commensal bacteria by rRNA-targeted reverse transcription-PCR.

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12 December 2020

Genomics: massively parallel sequencing.

1 reference

12 December 2020

Multicenter evaluation of the AMPLICOR and automated COBAS AMPLICOR CT/NG tests for detection of Chlamydia trachomatis.

1 reference

12 December 2020

DNA microarray for the detection of therapeutically relevant antibiotic resistance determinants in clinical isolates of Staphylococcus aureus

1 reference

12 December 2020

Identification of clinically relevant enterococcus species by direct sequencing of groES and spacer region

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12 December 2020

Clinical, epidemiological, and laboratory aspects of methicillin-resistant Staphylococcus aureus (MRSA) infections

1 reference

12 December 2020

Clinical validation of the molecular BD GeneOhm StaphSR assay for direct detection of Staphylococcus aureus and methicillin-resistant Staphylococcus aureus in positive blood cultures

1 reference

12 December 2020

Use of electrochemical DNA biosensors for rapid molecular identification of uropathogens in clinical urine specimens

1 reference

12 December 2020

Real-time monitoring of human enterovirus (HEV)-infected cells and anti-HEV 3C protease potency by fluorescence resonance energy transfer

1 reference

12 December 2020

Molecular diagnostics: future probe-based strategies

1 reference

12 December 2020

Multiplex quantification of 16S rDNA of predominant bacteria group within human fecal samples by polymerase chain reaction--ligase detection reaction (PCR-LDR).

1 reference

12 December 2020

Fabrication and evaluation of a sequence-specific oligonucleotide miniarray for molecular genotyping.

1 reference

12 December 2020

Development of a respiratory virus panel test for detection of twenty human respiratory viruses by use of multiplex PCR and a fluid microbead-based assay

1 reference

12 December 2020

Molecular analysis of Clostridium difficile PCR ribotype 027 isolates from Eastern and Western Canada

1 reference

12 December 2020

Direct detection and identification of Pseudomonas aeruginosa in clinical samples such as skin biopsy specimens and expectorations by multiplex PCR based on two outer membrane lipoprotein genes, oprI and oprL.

1 reference

12 December 2020

Accurate quantification of hepatitis C virus (HCV) RNA from all HCV genotypes by using branched-DNA technology

1 reference

12 December 2020

Next-generation sequencing: the race is on.

1 reference

12 December 2020

Evaluation of the IDI-MRSA assay on the SmartCycler real-time PCR platform for rapid detection of MRSA from screening specimens.

1 reference

12 December 2020

Evaluation of different nucleic acid amplification techniques for the detection of M. pneumoniae, C. pneumoniae and Legionella spp. in respiratory specimens from patients with community-acquired pneumonia

1 reference

12 December 2020

Rapid methods for diagnosis of bloodstream infections

1 reference

12 December 2020

Evaluation of BBL CHROMagar and CPS ID2 media for detection and presumptive identification of urinary tract pathogens

1 reference

12 December 2020

Impact of antimicrobial resistance on the treatment and outcome of patients with sepsis

1 reference

12 December 2020

Base-specific fragmentation of amplified 16S rRNA genes analyzed by mass spectrometry: a tool for rapid bacterial identification

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12 December 2020

Encoding microcarriers: present and future technologies.

1 reference

12 December 2020

Advances in the microbiological diagnosis of sepsis.

1 reference

12 December 2020

Emission characteristics of fluorescent labels with respect to temperature changes and subsequent effects on DNA microchip studies

1 reference

12 December 2020

Evaluation of INNO-LiPA MYCOBACTERIA v2: improved reverse hybridization multiple DNA probe assay for mycobacterial identification

1 reference

12 December 2020

Risk assessment models and contamination management: implications for broad-range ribosomal DNA PCR as a diagnostic tool in medical bacteriology

1 reference

12 December 2020

Prevalence of Plasmodium spp. in malaria asymptomatic African migrants assessed by nucleic acid sequence based amplification

1 reference

12 December 2020

Development of real-time PCR using Minor Groove Binding probe to monitor the biological control agent Candida oleophila (strain O)

1 reference

12 December 2020

The diagnosis of prosthetic joint infection: current techniques and emerging technologies.

1 reference

12 December 2020

Pattern recognition in pulmonary tuberculosis defined by high content peptide microarray chip analysis representing 61 proteins from M. tuberculosis

1 reference

12 December 2020

Direct detection of Kitasatospora species with a chaperone oligonucleotide microarray method lacking PCR amplification.

1 reference

12 December 2020

Microfluidic immunoassays as rapid saliva-based clinical diagnostics

1 reference

12 December 2020

Antimicrobial resistance and bacterial identification utilizing a microelectronic chip array

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12 December 2020

Nanotechnology. Biology offers nanotechs a helping hand

1 reference

12 December 2020

Quantitative, multiplexed detection of bacterial pathogens: DNA and protein applications of the Luminex LabMAP system.

1 reference

12 December 2020

Rapid detection of Wuchereria bancrofti and Brugia malayi in mosquito vectors (Diptera: Culicidae) using a real-time fluorescence resonance energy transfer multiplex PCR and melting curve analysis

1 reference

12 December 2020

Next-generation sequencing transforms today's biology

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12 December 2020

Microfluidic technologies in clinical diagnostics

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12 December 2020

The bacterial species definition in the genomic era.

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12 December 2020

Dry cotton or flocked respiratory swabs as a simple collection technique for the molecular detection of respiratory viruses using real-time NASBA.

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12 December 2020

Direct detection of Staphylococcus aureus mRNA using a flow through microarray.

1 reference

12 December 2020

Accurate multiplex polony sequencing of an evolved bacterial genome

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12 December 2020

A polydiacetylene microchip based on a biotin-streptavidin interaction for the diagnosis of pathogen infections

1 reference

12 December 2020

Microarray and nanotechnology applications of functional nanoparticles.

1 reference

12 December 2020

Fully automated quantification of hepatitis C virus (HCV) RNA in human plasma and human serum by the COBAS AmpliPrep/COBAS TaqMan system

1 reference

12 December 2020

Use of the novel INNO-LiPA line probe assay for detection of hepatitis B virus variants that confer resistance to entecavir therapy

1 reference

12 December 2020

Genomic approaches to understanding bacterial virulence

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12 December 2020

Nucleic acid techniques in bacterial systematics and identification

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12 December 2020

DNA array technology and diagnostic microbiology

1 reference

12 December 2020

10.1007/S00216-009-2779-8

Identifiers

DOI

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20 August 2017

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