Gramene QTL database: development, content and applications (Q37465259)

20 August 2017

Gramene QTL database: development, content and applications (English)

1 reference

20 August 2017

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5

Pankaj Jaiswal

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20 August 2017

13

Lincoln Stein

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20 August 2017

Junjian Ni

1

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20 August 2017

Anuradha Pujar

2

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20 August 2017

Ken Youens-Clark

3

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20 August 2017

Immanuel Yap

4

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20 August 2017

Isaak Tecle

6

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20 August 2017

Chih-Wei Tung

7

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20 August 2017

Liya Ren

8

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20 August 2017

William Spooner

9

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20 August 2017

Xuehong Wei

10

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20 August 2017

Shuly Avraham

11

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20 August 2017

Doreen Ware

12

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20 August 2017

Susan McCouch

14

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20 August 2017

8 May 2009

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20 August 2017

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20 August 2017

2009

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20 August 2017

bap005

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ARCHIPELAGO: a dedicated resource for exploiting past, present, and future genomic data on disease resistance regulation in rice.

20 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

A genome-wide meta-analysis of rice blast resistance genes and quantitative trait loci provides new insights into partial and complete resistance

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

The Plant Ontology Database: a community resource for plant structure and developmental stages controlled vocabulary and annotations

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

Microarray analysis of iron deficiency chlorosis in near-isogenic soybean lines

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

Gramene: a growing plant comparative genomics resource

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

Linking metabolic QTLs with network and cis-eQTLs controlling biosynthetic pathways

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

Mining iron: iron uptake and transport in plants

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

It's elementary: enhancing Fe3+ reduction improves rice yields

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

Genetic architecture of complex traits in plants

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

The indeterminate gametophyte1 gene of maize encodes a LOB domain protein required for embryo Sac and leaf development

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

MaizeGDB's new data types, resources and activities

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

The mouse as a model for human biology: a resource guide for complex trait analysis

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

The plant structure ontology, a unified vocabulary of anatomy and morphology of a flowering plant

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

Whole-plant growth stage ontology for angiosperms and its application in plant biology

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

Gramene: a bird's eye view of cereal genomes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

R/qtl: QTL mapping in experimental crosses

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

Gramene, a tool for grass genomics

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

BLAT—The BLAST-Like Alignment Tool

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

Quantitative trait loci and metabolic pathways

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

Comparative linkage maps of the rice and maize genomes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

Gramene: development and integration of trait and gene ontologies for rice

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

The rice bHLH protein OsIRO2 is an essential regulator of the genes involved in Fe uptake under Fe-deficient conditions

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

TASSEL: software for association mapping of complex traits in diverse samples

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

Believe it or not, QTLs are accurate!

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

Grasses as a single genetic system: genome composition, collinearity and compatibility

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

The Association of Size Differences with Seed-Coat Pattern and Pigmentation in PHASEOLUS VULGARIS.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

Association mapping of iron deficiency chlorosis loci in soybean (Glycine max L. Merr.) advanced breeding lines

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

OsYSL2 is a rice metal-nicotianamine transporter that is regulated by iron and expressed in the phloem

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

Quantitative trait loci and comparative genomics of cereal cell wall composition

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

Candidate defense genes from rice, barley, and maize and their association with qualitative and quantitative resistance in rice

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

T-DNA insertional mutagenesis for functional genomics in rice.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

Plant responses to metal toxicity.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2790302

Increased senescence-associated gene expression and lipid peroxidation induced by iron deficiency in rice roots

2 September 2018

1 reference

12 December 2020

Iron deficiency in rice shoots: identification of novel induced genes using RDA and possible relation to leaf senescence

1 reference

12 December 2020

Evolutionary History of the Grasses

1 reference

12 December 2020

Resolution of quantitative traits into Mendelian factors by using a complete linkage map of restriction fragment length polymorphisms

1 reference

12 December 2020

Iron: Nutritious, Noxious, and Not Readily Available

1 reference

12 December 2020

Identifiers

DOI

10.1093/DATABASE/BAP005

1 reference

20 August 2017

1 reference

20 August 2017

PubMed publication ID

20157478

1 reference