Adapting the machine: adaptor proteins for Hsp100/Clp and AAA+ proteases (Q37553901)

21 August 2017

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title

Adapting the machine: adaptor proteins for Hsp100/Clp and AAA+ proteases (English)

1 reference

21 August 2017

Janine Kirstein

1

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Kürşad Turgay

object named as

Kürşad Turgay

series ordinal

4

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David A. Dougan

object named as

David A Dougan

series ordinal

3

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author name string

Noël Molière

series ordinal

2

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PubMed ID

19609260

21 August 2017

language of work or name

English

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publication date

1 August 2009

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Nature Reviews Microbiology

21 August 2017

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21 August 2017

7

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21 August 2017

8

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21 August 2017

589-599

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https://scigraph.springernature.com/pub.10.1038/nrmicro2185

21 August 2017

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31 March 2020

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ClpS is an essential component of the N-end rule pathway in Escherichia coli.

31 March 2020

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31 March 2020

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31 March 2020

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31 March 2020

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31 March 2020

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31 March 2020

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31 March 2020

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31 March 2020

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31 March 2020

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MecA, an adaptor protein necessary for ClpC chaperone activity

31 March 2020

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SpoVM, a small protein essential to development in Bacillus subtilis, interacts with the ATP-dependent protease FtsH.

31 March 2020

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Structural and functional studies on an FtsH inhibitor from Bacillus subtilis

31 March 2020

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31 March 2020

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The ins and outs of DNA transfer in bacteria.

31 March 2020

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31 March 2020

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Biochemical and genetic characterization of a competence pheromone from B. subtilis

31 March 2020

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Identification of comS, a gene of the srfA operon that regulates the establishment of genetic competence in Bacillus subtilis

31 March 2020

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A small gene, designated comS, located within the coding region of the fourth amino acid-activation domain of srfA, is required for competence development in Bacillus subtilis

31 March 2020

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Biochemical characterization of a molecular switch involving the heat shock protein ClpC, which controls the activity of ComK, the competence transcription factor of Bacillus subtilis

31 March 2020

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A peptide signal for adapter protein-mediated degradation by the AAA+ protease ClpCP

31 March 2020

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A MecA paralog, YpbH, binds ClpC, affecting both competence and sporulation

31 March 2020

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A new tyrosine phosphorylation mechanism involved in signal transduction in Bacillus subtilis.

31 March 2020

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CtsR, a novel regulator of stress and heat shock response, controls clp and molecular chaperone gene expression in gram-positive bacteria.

31 March 2020

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A tyrosine kinase and its activator control the activity of the CtsR heat shock repressor in B. subtilis

31 March 2020

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YjbH is a novel negative effector of the disulphide stress regulator, Spx, in Bacillus subtilis

31 March 2020

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The YjbH protein of Bacillus subtilis enhances ClpXP-catalyzed proteolysis of Spx

31 March 2020

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MurAA, catalysing the first committed step in peptidoglycan biosynthesis, is a target of Clp-dependent proteolysis in Bacillus subtilis

31 March 2020

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A specificity-enhancing factor for the ClpXP degradation machine

31 March 2020

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Subunit-specific degradation of the UmuD/D' heterodimer by the ClpXP protease: the role of trans recognition in UmuD' stability

31 March 2020

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Distinct peptide signals in the UmuD and UmuD' subunits of UmuD/D' mediate tethering and substrate processing by the ClpXP protease.

31 March 2020

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Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity

31 March 2020

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31 March 2020

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The response regulator RssB controls stability of the sigma(S) subunit of RNA polymerase in Escherichia coli.

31 March 2020

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The cellular level of the recognition factor RssB is rate-limiting for sigmaS proteolysis: implications for RssB regulation and signal transduction in sigmaS turnover in Escherichia coli.

31 March 2020

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The RssB response regulator directly targets sigma(S) for degradation by ClpXP

31 March 2020

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Sequential recognition of two distinct sites in sigma(S) by the proteolytic targeting factor RssB and ClpX.

31 March 2020

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A two-component phosphotransfer network involving ArcB, ArcA, and RssB coordinates synthesis and proteolysis of sigmaS (RpoS) in E. coli

31 March 2020

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ClpS, a substrate modulator of the ClpAP machine

31 March 2020

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An intrinsic degradation tag on the ClpA C-terminus regulates the balance of ClpAP complexes with different substrate specificity.

31 March 2020

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Cytoplasmic degradation of ssrA-tagged proteins.

31 March 2020

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The N-end rule in bacteria.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2185

The N-end rule pathway for regulated proteolysis: prokaryotic and eukaryotic strategies

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Conserved residues in the N-domain of the AAA+ chaperone ClpA regulate substrate recognition and unfolding

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

ClpS is the recognition component for Escherichia coli substrates of the N-end rule degradation pathway.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Structural basis of N-end rule substrate recognition in Escherichia coli by the ClpAP adaptor protein ClpS

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Modification of PATase by L/F-transferase generates a ClpS-dependent N-end rule substrate in Escherichia coli

31 March 2020

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Role of inorganic polyphosphate in promoting ribosomal protein degradation by the Lon protease in E. coli

31 March 2020

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PinA inhibits ATP hydrolysis and energy-dependent protein degradation by Lon protease

31 March 2020

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Peptide-assisted degradation of the Salmonella MgtC virulence factor

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2185

Recent advances in the study of Clp, FtsH and other proteases located in chloroplasts

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2185

The Arabidopsis ClpB/Hsp100 family of proteins: chaperones for stress and chloroplast development

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Complexity of the heat stress response in plants

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2185

Cyanobacterial ClpC/HSP100 protein displays intrinsic chaperone activity.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2185

Distinctive types of ATP-dependent Clp proteases in cyanobacteria

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2185

Structure and function of a novel type of ATP-dependent Clp protease

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2185

NblA, a key protein of phycobilisome degradation, interacts with ClpC, a HSP100 chaperone partner of a cyanobacterial Clp protease

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Modulating RssB activity: IraP, a novel regulator of sigma(S) stability in Escherichia coli

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Multiple pathways for regulation of sigmaS (RpoS) stability in Escherichia coli via the action of multiple anti-adaptors.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

A DNA damage response in Escherichia coli involving the alternative sigma factor, RpoS.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2185

Adaptor protein controlled oligomerization activates the AAA+ protein ClpC

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Polar localization and compartmentalization of ClpP proteases during growth and sporulation in Bacillus subtilis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Localization of general and regulatory proteolysis in Bacillus subtilis cells.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Clp and Lon proteases occupy distinct subcellular positions in Bacillus subtilis.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Compartmentalization of transcription and translation in Bacillus subtilis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Asymmetric segregation of protein aggregates is associated with cellular aging and rejuvenation.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Specific polar localization of ribosomes in Bacillus subtilis depends on active transcription

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Bet-hedging and epigenetic inheritance in bacterial cell development

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

A Bacterial Cell-Cycle Regulatory Network Operating in Time and Space

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Protein localization and cell fate in bacteria

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

An essential protease involved in bacterial cell-cycle control

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Second messenger-mediated spatiotemporal control of protein degradation regulates bacterial cell cycle progression

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

A dynamically localized protease complex and a polar specificity factor control a cell cycle master regulator

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

A bacterial control circuit integrates polar localization and proteolysis of key regulatory proteins with a phospho-signaling cascade

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Recruitment of a cytoplasmic response regulator to the cell pole is linked to its cell cycle-regulated proteolysis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Direct and adaptor-mediated substrate recognition by an essential AAA+ protease

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Structure and substrate specificity of an SspB ortholog: design implications for AAA+ adaptors

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Versatile modes of peptide recognition by the AAA+ adaptor protein SspB.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Structure of a Delivery Protein for an AAA+ Protease in Complex with a Peptide Degradation Tag

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Structural basis of SspB-tail recognition by the zinc binding domain of ClpX

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Structural basis of degradation signal recognition by SspB, a specificity-enhancing factor for the ClpXP proteolytic machine

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Targeted Delivery of an ssrA-Tagged Substrate by the Adaptor Protein SspB to Its Cognate AAA+ Protein ClpX

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Crystal structure of the heterodimeric complex of the adaptor, ClpS, with the N-domain of the AAA+ chaperone, ClpA

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

The Molecular Basis of N-End Rule Recognition

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Structural analysis of the adaptor protein ClpS in complex with the N-terminal domain of ClpA

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Structural and Motional Contributions of the Bacillus subtilis ClpC N-Domain to Adaptor Protein Interactions

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Characterization of a specificity factor for an AAA+ ATPase: assembly of SspB dimers with ssrA-tagged proteins and the ClpX hexamer

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Specificity in substrate and cofactor recognition by the N-terminal domain of the chaperone ClpX

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Flexible linkers leash the substrate binding domain of SspB to a peptide module that stabilizes delivery complexes with the AAA+ ClpXP protease.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Overlapping recognition determinants within the ssrA degradation tag allow modulation of proteolysis.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Engineering controllable protein degradation.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Bioinformatic analysis of ClpS, a protein module involved in prokaryotic and eukaryotic protein degradation

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

ClpS modulates but is not essential for bacterial N-end rule degradation

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Distinct structural elements of the adaptor ClpS are required for regulating degradation by ClpAP.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

The N- and C-terminal domains of MecA recognize different partners in the competence molecular switch

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

The proteasome of Mycobacterium tuberculosis is required for resistance to nitric oxide

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Characterization of a Mycobacterium tuberculosis proteasomal ATPase homologue

31 March 2020

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Identification of substrates of the Mycobacterium tuberculosis proteasome

31 March 2020

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Ubiquitin-like protein involved in the proteasome pathway of Mycobacterium tuberculosis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Proteasomal protein degradation in Mycobacteria is dependent upon a prokaryotic ubiquitin-like protein

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Bacterial ubiquitin-like modifier Pup is deamidated and conjugated to substrates by distinct but homologous enzymes

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Dysregulation of bacterial proteolytic machinery by a new class of antibiotics

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

The antibiotic ADEP reprogrammes ClpP, switching it from a regulated to an uncontrolled protease

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

C-terminal extension of truncated recombinant proteins in Escherichia coli with a 10Sa RNA decapeptide.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Characterization of 10S RNA: A new stable RNA molecule from Escherichia coli

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Role of a peptide tagging system in degradation of proteins synthesized from damaged messenger RNA

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

The tmRNA system for translational surveillance and ribosome rescue.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

The ClpXP and ClpAP proteases degrade proteins with carboxy-terminal peptide tails added by the SsrA-tagging system

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

The N-end rule: functions, mysteries, uses

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

In vivo half-life of a protein is a function of its amino-terminal residue

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

The N-end rule in Escherichia coli: cloning and analysis of the leucyl, phenylalanyl-tRNA-protein transferase gene aat

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Protein-based peptide-bond formation by aminoacyl-tRNA protein transferase

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2185

Inducible protein degradation in Bacillus subtilis using heterologous peptide tags and adaptor proteins to target substrates to the protease ClpXP.

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19609260

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The first gene of the Bacillus subtilis clpC operon, ctsR, encodes a negative regulator of its own operon and other class III heat shock genes.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19609260

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NRMICRO2185

1 reference

21 August 2017

1 reference

PubMed ID

19609260