Phylogenetic perspectives on the epidemiology and origins of SARS and SARS-like coronaviruses (Q37607465)

21 August 2017

3 references

13 July 2022

22 October 2022

Phylogenetic perspectives on the epidemiology and origins of SARS and SARS-like coronaviruses (English)

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21 August 2017

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Mang Shi

3

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Tommy Tsan-Yuk Lam

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Tommy Tsan-Yuk Lam

4

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author name string

Chi Wai Yip

1

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21 August 2017

Chung Chau Hon

2

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21 August 2017

Ken Yan-Ching Chow

5

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21 August 2017

Fanya Zeng

6

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21 August 2017

Frederick Chi-Ching Leung

7

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21 August 2017

30 September 2009

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Infection, Genetics and Evolution

21 August 2017

1 December 2009

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13 July 2022

22 October 2022

3 references

21 August 2017

13 July 2022

22 October 2022

9

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21 August 2017

6

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21 August 2017

1185-1196

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Evolutionary analyses of European H1N2 swine influenza A virus by placing timestamps on the multiple reassortment events

21 August 2017

1 reference

12 December 2020

Receptor and viral determinants of SARS-coronavirus adaptation to human ACE2.

1 reference

12 December 2020

Genetic diversity and models of viral evolution for the hepatitis C virus

1 reference

12 December 2020

Molecular Epidemiology of SARS — From Amoy Gardens to Taiwan

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12 December 2020

Complete genomic sequence of human coronavirus OC43: molecular clock analysis suggests a relatively recent zoonotic coronavirus transmission event

1 reference

12 December 2020

Adaptive evolution of the spike gene of SARS coronavirus: changes in positively selected sites in different epidemic groups

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12 December 2020

Complete genome sequences of the SARS-CoV: the BJ Group (Isolates BJ01-BJ04).

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12 December 2020

Comparative full-length genome sequence analysis of 14 SARS coronavirus isolates and common mutations associated with putative origins of infection

1 reference

12 December 2020

Bovine-like coronaviruses isolated from four species of captive wild ruminants are homologous to bovine coronaviruses, based on complete genomic sequences.

1 reference

12 December 2020

Recombination in evolutionary genomics

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12 December 2020

Model selection and the molecular clock

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12 December 2020

Feline coronavirus type II strains 79-1683 and 79-1146 originate from a double recombination between feline coronavirus type I and canine coronavirus

1 reference

12 December 2020

A novel coronavirus associated with severe acute respiratory syndrome

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12 December 2020

Estimation of primate speciation dates using local molecular clocks

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12 December 2020

Understanding the super-spreading events of SARS in Singapore

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12 December 2020

Severe acute respiratory syndrome coronavirus sequence characteristics and evolutionary rate estimate from maximum likelihood analysis

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12 December 2020

Inference of viral evolutionary rates from molecular sequences

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12 December 2020

High recombination and mutation rates in mouse hepatitis virus suggest that coronaviruses may be potentially important emerging viruses.

1 reference

12 December 2020

Characterization of severe acute respiratory syndrome coronavirus genomes in Taiwan: molecular epidemiology and genome evolution

1 reference

12 December 2020

Mosaic evolution of the severe acute respiratory syndrome coronavirus

1 reference

12 December 2020

Isolation of avian infectious bronchitis coronavirus from domestic peafowl (Pavo cristatus) and teal (Anas).

1 reference

12 December 2020

Molecular epidemiology of SARS-associated coronavirus, Beijing

1 reference

12 December 2020

Unique and conserved features of genome and proteome of SARS-coronavirus, an early split-off from the coronavirus group 2 lineage

1 reference

12 December 2020

Isolation and characterization of viruses related to the SARS coronavirus from animals in southern China

1 reference

12 December 2020

Molecular evolution of the SARS coronavirus during the course of the SARS epidemic in China

1 reference

12 December 2020

Moderate mutation rate in the SARS coronavirus genome and its implications

1 reference

12 December 2020

Structural Analysis of Major Species Barriers between Humans and Palm Civets for Severe Acute Respiratory Syndrome Coronavirus Infections

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12 December 2020

Phylogenomics and bioinformatics of SARS-CoV.

1 reference

12 December 2020

A previously undescribed coronavirus associated with respiratory disease in humans

1 reference

12 December 2020

Molecular diversity of coronaviruses in bats.

1 reference

12 December 2020

Coronavirus genomic-sequence variations and the epidemiology of the severe acute respiratory syndrome.

1 reference

12 December 2020

Characterizing 56 complete SARS-CoV S-gene sequences from Hong Kong.

1 reference

12 December 2020

Genomic characterisation of the severe acute respiratory syndrome coronavirus of Amoy Gardens outbreak in Hong Kong.

1 reference

12 December 2020

The phylogeny of SARS coronavirus

1 reference

12 December 2020

Phylogenetic analysis and sequence comparisons of structural and non-structural SARS coronavirus proteins in Taiwan.

1 reference

12 December 2020

SARS associated coronavirus has a recombinant polymerase and coronaviruses have a history of host-shifting

1 reference

12 December 2020

Tracing the origin and history of the HIV-2 epidemic

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12 December 2020

A 193-amino acid fragment of the SARS coronavirus S protein efficiently binds angiotensin-converting enzyme 2

1 reference

12 December 2020

Angiotensin-converting enzyme 2 is a functional receptor for the SARS coronavirus

1 reference

12 December 2020

Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages

1 reference

12 December 2020

How good are deep phylogenetic trees?

1 reference

12 December 2020

Relaxed phylogenetics and dating with confidence

1 reference

12 December 2020

Testing the hypothesis of a recombinant origin of the SARS-associated coronavirus.

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12 December 2020

Superspreading SARS events, Beijing, 2003

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12 December 2020

Identification of a novel coronavirus in patients with severe acute respiratory syndrome

1 reference

12 December 2020

Molecular epidemiology of the novel coronavirus that causes severe acute respiratory syndrome.

1 reference

12 December 2020

A common RNA motif in the 3' end of the genomes of astroviruses, avian infectious bronchitis virus and an equine rhinovirus

1 reference

12 December 2020

Severe acute respiratory syndrome coronavirus phylogeny: toward consensus

1 reference

12 December 2020

Evolutionary relationships between bat coronaviruses and their hosts

1 reference

12 December 2020

Superspreading and the effect of individual variation on disease emergence

1 reference

12 December 2020

Evolutionary implications of Avian Infectious Bronchitis Virus (AIBV) analysis

1 reference

12 December 2020

Phylogenetic evidence for recombination in dengue virus

1 reference

12 December 2020

BEAST: Bayesian evolutionary analysis by sampling trees

1 reference

12 December 2020

THE ORIGINS OF NEW PANDEMIC VIRUSES: The Acquisition of New Host Ranges by Canine Parvovirus and Influenza A Viruses

1 reference

12 December 2020

Episodic evolution mediates interspecies transfer of a murine coronavirus

1 reference

12 December 2020

Comments to the predecessor of human SARS coronavirus in 2003–2004 epidemic

1 reference

12 December 2020

Virology. The SARS coronavirus: a postgenomic era.

1 reference

12 December 2020

Molecular evolution and multilocus sequence typing of 145 strains of SARS-CoV.

1 reference

12 December 2020

Coronaviruses in poultry and other birds

1 reference

12 December 2020

Molecular identification and characterization of novel coronaviruses infecting graylag geese (Anser anser), feral pigeons (Columbia livia) and mallards (Anas platyrhynchos).

1 reference

12 December 2020

Viral evolution and the emergence of SARS coronavirus

1 reference

12 December 2020

Evolutionary insights into the ecology of coronaviruses.

1 reference

12 December 2020

Evolution of genomes, host shifts and the geographic spread of SARS-CoV and related coronaviruses

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12 December 2020

Mutational dynamics of the SARS coronavirus in cell culture and human populations isolated in 2003

1 reference

12 December 2020

Detection of a novel and highly divergent coronavirus from asian leopard cats and Chinese ferret badgers in Southern China.

1 reference

12 December 2020

GARD: a genetic algorithm for recombination detection

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12 December 2020

The role of evolution in the emergence of infectious diseases

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12 December 2020

Predicting super spreading events during the 2003 severe acute respiratory syndrome epidemics in Hong Kong and Singapore

1 reference

12 December 2020

SARS molecular epidemiology: a Chinese fairy tale of controlling an emerging zoonotic disease in the genomics era.

1 reference

12 December 2020

Full-length genome sequences of two SARS-like coronaviruses in horseshoe bats and genetic variation analysis

1 reference

12 December 2020

Mosaic structure of human coronavirus NL63, one thousand years of evolution.

1 reference

12 December 2020

SARS: an amalgam of avian and mammalian viruses?

1 reference

12 December 2020

Evidence from the evolutionary analysis of nucleotide sequences for a recombinant history of SARS-CoV.

1 reference

12 December 2020

Timing the ancestor of the HIV-1 pandemic strains

1 reference

12 December 2020

Identification of a novel coronavirus from a beluga whale by using a panviral microarray

1 reference

12 December 2020

A review of studies on animal reservoirs of the SARS coronavirus

1 reference

12 December 2020

Coronaviruses from pheasants (Phasianus colchicus) are genetically closely related to coronaviruses of domestic fowl (infectious bronchitis virus) and turkeys

1 reference

12 December 2020

Epidemiology and cause of severe acute respiratory syndrome (SARS) in Guangdong, People's Republic of China, in February, 2003.

1 reference

12 December 2020

The molecular population genetics of HIV-1 group O

1 reference

12 December 2020

Severe acute respiratory syndrome coronavirus-like virus in Chinese horseshoe bats

1 reference

12 December 2020

Structure of SARS coronavirus spike receptor-binding domain complexed with receptor

1 reference

12 December 2020

Prevalence and genetic diversity of coronaviruses in bats from China

1 reference

12 December 2020

Laboratory diagnosis of four recent sporadic cases of community-acquired SARS, Guangdong Province, China

1 reference

12 December 2020

Characterization and complete genome sequence of a novel coronavirus, coronavirus HKU1, from patients with pneumonia

1 reference

12 December 2020

Animal origins of the severe acute respiratory syndrome coronavirus: insight from ACE2-S-protein interactions

1 reference

12 December 2020

SARS: experience at Prince of Wales Hospital, Hong Kong

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12 December 2020

Inferring complex phylogenies.

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12 December 2020

SARS transmission pattern in Singapore reassessed by viral sequence variation analysis

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12 December 2020

Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level

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12 December 2020

SARS-CoV infection was from at least two origins in the Taiwan area.

1 reference

12 December 2020

Estimated timing of the last common ancestor of the SARS coronavirus

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12 December 2020

Molecular evolution analysis and geographic investigation of severe acute respiratory syndrome coronavirus-like virus in palm civets at an animal market and on farms

1 reference

12 December 2020

Characterization of a novel coronavirus associated with severe acute respiratory syndrome

1 reference

12 December 2020

A novel variant of avian infectious bronchitis virus resulting from recombination among three different strains

1 reference

12 December 2020

Comparative analysis of complete genome sequences of three avian coronaviruses reveals a novel group 3c coronavirus.

1 reference

12 December 2020

Date of origin of the SARS coronavirus strains

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12 December 2020

Detecting recombination in evolving nucleotide sequences

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12 December 2020

Differential stepwise evolution of SARS coronavirus functional proteins in different host species

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12 December 2020

Close relationship between SARS-coronavirus and group 2 coronavirus

1 reference

12 December 2020

SARS-CoV infection in a restaurant from palm civet

1 reference

12 December 2020

Civets are equally susceptible to experimental infection by two different severe acute respiratory syndrome coronavirus isolates

1 reference

12 December 2020

Cross-host evolution of severe acute respiratory syndrome coronavirus in palm civet and human

1 reference

12 December 2020

Phylogeny of the SARS coronavirus.

1 reference

12 December 2020

Phylogenetic and recombination analysis of coronavirus HKU1, a novel coronavirus from patients with pneumonia

1 reference

12 December 2020

The Genome sequence of the SARS-associated coronavirus

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12 December 2020

Possible role of an animal vector in the SARS outbreak at Amoy Gardens

1 reference

12 December 2020

Bats are natural reservoirs of SARS-like coronaviruses

1 reference

12 December 2020

Pandemic influenza threat and preparedness

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12 December 2020

Coronavirus as a possible cause of severe acute respiratory syndrome

1 reference

12 December 2020

Evidence of the recombinant origin of a bat severe acute respiratory syndrome (SARS)-like coronavirus and its implications on the direct ancestor of SARS coronavirus

1 reference

12 December 2020

Ancient phylogenetic relationships

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12 December 2020

Monophyletic relationship between severe acute respiratory syndrome coronavirus and group 2 coronaviruses

1 reference

12 December 2020

Origin of AIDS: contaminated polio vaccine theory refuted.

1 reference

12 December 2020

Molecular epidemiology of severe acute respiratory syndrome-associated coronavirus infections in Taiwan.

1 reference

12 December 2020

The complete genome sequence of severe acute respiratory syndrome coronavirus strain HKU-39849 (HK-39).

1 reference

12 December 2020

Recombinant canine coronaviruses related to transmissible gastroenteritis virus of Swine are circulating in dogs

1 reference

12 December 2020

Switching species tropism: an effective way to manipulate the feline coronavirus genome

1 reference

12 December 2020

10.1016/J.MEEGID.2009.09.015

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DOI

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21 August 2017

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