Protein transport across and into cell membranes in bacteria and archaea (Q37613509)

21 August 2017

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title

Protein transport across and into cell membranes in bacteria and archaea (English)

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21 August 2017

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Jijun Yuan

1

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21 August 2017

Jessica C Zweers

series ordinal

2

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21 August 2017

Jan Maarten van Dijl

series ordinal

3

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21 August 2017

Ross E Dalbey

series ordinal

4

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21 August 2017

publication date

10 October 2009

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Cellular and Molecular Life Sciences

21 August 2017

published in

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21 August 2017

volume

67

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21 August 2017

issue

2

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21 August 2017

page(s)

179-199

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Structural requirements of Bacillus subtilis small cytoplasmic RNA for cell growth, sporulation, and extracellular enzyme production

21 August 2017

cites work

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https://api.crossref.org/works/10.1007%2FS00018-009-0160-X

Small cytoplasmic RNA of Bacillus subtilis: functional relationship with human signal recognition particle 7S RNA and Escherichia coli 4.5S RNA

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00018-009-0160-X

Structure of the archaebacterial 7S RNA molecule

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00018-009-0160-X

The signal recognition particle receptor alpha subunit of the hyperthermophilic archaeon Acidianus ambivalens exhibits an intrinsic GTP-hydrolyzing activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00018-009-0160-X

Reconstitution of Sec-dependent membrane protein insertion: nascent FtsQ interacts with YidC in a SecYEG-dependent manner

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00018-009-0160-X

Protein transport in the halophilic archaeon Halobacterium sp. NRC-1: a major role for the twin-arginine translocation pathway?

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00018-009-0160-X

Haloferax volcanii twin-arginine translocation substates include secreted soluble, C-terminally anchored and lipoproteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00018-009-0160-X

The Translocation Apparatus of the Endoplasmic Reticulum

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00018-009-0160-X

Genes in the accessory sec locus of Streptococcus gordonii have three functionally distinct effects on the expression of the platelet-binding protein GspB.

21 January 2018

1 reference

12 December 2020

Homology of 54K protein of signal-recognition particle, docking protein and two E. coli proteins with putative GTP-binding domains

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12 December 2020

Sec61p and BiP directly facilitate polypeptide translocation into the ER.

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12 December 2020

A subset of bacterial inner membrane proteins integrated by the twin-arginine translocase

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12 December 2020

YidC as an essential and multifunctional component in membrane protein assembly

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12 December 2020

Structure of dimeric SecA, the Escherichia coli preprotein translocase motor

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12 December 2020

Function of YidC for the insertion of M13 procoat protein in Escherichia coli: translocation of mutants that show differences in their membrane potential dependence and Sec requirement

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12 December 2020

The Pf3 coat protein contacts TM1 and TM3 of YidC during membrane biogenesis

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12 December 2020

SRP-mediated protein targeting: structure and function revisited

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12 December 2020

X-ray structure of the T. Aquaticus Ftsy:GDP complex suggests functional roles for the C-terminal helix of the SRP GTPases

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12 December 2020

The E. coli signal recognition particle is required for the insertion of a subset of inner membrane proteins

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12 December 2020

The Escherichia coli twin-arginine translocation apparatus incorporates a distinct form of TatABC complex, spectrum of modular TatA complexes and minor TatAB complex.

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12 December 2020

Effectiveness and limitation of two-dimensional gel electrophoresis in bacterial membrane protein proteomics and perspectives

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12 December 2020

ΔμH+ and ATP function at different steps of the catalytic cycle of preprotein translocase

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12 December 2020

Genetic Analysis of Pathway Specificity during Posttranslational Protein Translocation across the Escherichia coli Plasma Membrane

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12 December 2020

Topogenic signals in integral membrane proteins

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12 December 2020

The Tat pathway of the plant pathogen Pseudomonas syringae is required for optimal virulence

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12 December 2020

Protein translocation in the three domains of life: variations on a theme

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12 December 2020

Competition between Sec- and TAT-dependent protein translocation in Escherichia coli

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12 December 2020

The entire N-terminal half of TatC is involved in twin-arginine precursor binding.

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12 December 2020

Adaptation of protein secretion to extremely high-salt conditions by extensive use of the twin-arginine translocation pathway

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12 December 2020

Escherichia coli YidC is a membrane insertase for Sec-independent proteins

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12 December 2020

YidC, the Escherichia coli homologue of mitochondrial Oxa1p, is a component of the Sec translocase

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12 December 2020

Structural insights into SRP RNA: an induced fit mechanism for SRP assembly

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12 December 2020

Protein translocation: common themes from bacteria to man.

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12 December 2020

A hidden Markov model for predicting transmembrane helices in protein sequences

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12 December 2020

Domain structure, GTP-hydrolyzing activity and 7S RNA binding of Acidianus ambivalens ffh-homologous protein suggest an SRP-like complex in archaea

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12 December 2020

The twin-arginine translocation pathway of Mycobacterium smegmatis is functional and required for the export of mycobacterial beta-lactamases

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12 December 2020

Evolutionarily conserved binding of ribosomes to the translocation channel via the large ribosomal RNA.

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12 December 2020

SRP19 is a dispensable component of the signal recognition particle in Archaea.

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12 December 2020

Investigating the role of secA2 in secretion and glycosylation of a fimbrial adhesin in Streptococcus parasanguis FW213.

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12 December 2020

Diversity and evolution of protein translocation.

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12 December 2020

Membrane association of FtsY, the E. coli SRP receptor

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12 December 2020

Archaeal protein translocation crossing membranes in the third domain of life

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12 December 2020

The distribution of positively charged residues in bacterial inner membrane proteins correlates with the trans-membrane topology

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12 December 2020

A simple method for displaying the hydropathic character of a protein

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12 December 2020

The distribution of charged amino acids in mitochondrial inner-membrane proteins suggests different modes of membrane integration for nuclearly and mitochondrially encoded proteins

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12 December 2020

Structure of a complex of the ATPase SecA and the protein-translocation channel

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12 December 2020

One of three transmembrane stretches is sufficient for the functioning of the SecE protein, a membrane component of the E. coli secretion machinery.

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12 December 2020

Bacterial protein secretion through the translocase nanomachine

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12 December 2020

Model for signal sequence recognition from amino-acid sequence of 54K subunit of signal recognition particle

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12 December 2020

Protein translocation across the eukaryotic endoplasmic reticulum and bacterial plasma membranes

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12 December 2020

A putative signal recognition particle receptor alpha subunit (SR alpha) homologue is expressed in the hyperthermophilic crenarchaeon Sulfolobus acidocaldarius

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12 December 2020

The E. coli ffh gene is necessary for viability and efficient protein export.

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12 December 2020

A microdomain for protein secretion in Gram-positive bacteria

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12 December 2020

SecDF of Bacillus subtilis, a molecular Siamese twin required for the efficient secretion of proteins.

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12 December 2020

Analysis of the Bacillus subtilis spoIIIJ gene and its Paralogue gene, yqjG.

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12 December 2020

SecA membrane cycling at SecYEG is driven by distinct ATP binding and hydrolysis events and is regulated by SecD and SecF.

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12 December 2020

Best alpha-helical transmembrane protein topology predictions are achieved using hidden Markov models and evolutionary information

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12 December 2020

The NG domain of the prokaryotic signal recognition particle receptor, FtsY, is fully functional when fused to an unrelated integral membrane polypeptide

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12 December 2020

An alternative protein targeting pathway in Escherichia coli: studies on the role of FtsY.

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12 December 2020

The general protein secretory pathway: phylogenetic analyses leading to evolutionary conclusions

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12 December 2020

Substrate twinning activates the signal recognition particle and its receptor

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12 December 2020

Characterization of the sat operon in Streptococcus mutans: evidence for a role of Ffh in acid tolerance

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12 December 2020

Overflow of a hyper-produced secretory protein from the Bacillus Sec pathway into the Tat pathway for protein secretion as revealed by proteogenomics

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12 December 2020

Oxa1/Alb3/YidC system for insertion of membrane proteins in mitochondria, chloroplasts and bacteria (review).

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12 December 2020

Prediction of membrane-protein topology from first principles

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12 December 2020

SecA, the motor of the secretion machine, binds diverse partners on one interactive surface

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12 December 2020

Presence of a gene in the archaebacterium Methanococcus vannielii homologous to secY of eubacteria

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12 December 2020

SecA2 functions in the secretion of superoxide dismutase A and in the virulence of Mycobacterium tuberculosis

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12 December 2020

The Legionella pneumophila tatB gene facilitates secretion of phospholipase C, growth under iron-limiting conditions, and intracellular infection

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12 December 2020

A combined transmembrane topology and signal peptide prediction method

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12 December 2020

Two gene determinants are differentially involved in the biogenesis of Fap1 precursors in Streptococcus parasanguis

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12 December 2020

Substrate-induced conformational change of the Escherichia coli membrane insertase YidC.

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12 December 2020

Phylogenetic and structural analyses of the oxa1 family of protein translocases

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12 December 2020

SecD and SecF facilitate protein export in Escherichia coli.

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12 December 2020

A role for the two-helix finger of the SecA ATPase in protein translocation.

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12 December 2020

Bifunctional TatA subunits in minimal Tat protein translocases

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12 December 2020

Crystal structure of the translocation ATPase SecA from Thermus thermophilus reveals a parallel, head-to-head dimer.

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12 December 2020

Advances in understanding bacterial outer-membrane biogenesis

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12 December 2020

A dual function for SecA in the assembly of single spanning membrane proteins in Escherichia coli

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12 December 2020

Membrane protein structure prediction. Hydrophobicity analysis and the positive-inside rule

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12 December 2020

A facile reporter system for the experimental identification of twin-arginine translocation (Tat) signal peptides from all kingdoms of life

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12 December 2020

Two minimal Tat translocases in Bacillus

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12 December 2020

Complementary impact of paralogous Oxa1-like proteins of Bacillus subtilis on post-translocational stages in protein secretion.

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12 December 2020

Sec61beta--a component of the archaeal protein secretory system

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12 December 2020

TatB and TatC form a functional and structural unit of the twin-arginine translocase from Escherichia coli

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12 December 2020

flhF, a Bacillus subtilis flagellar gene that encodes a putative GTP-binding protein

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12 December 2020

Tat-dependent protein targeting in prokaryotes and chloroplasts

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12 December 2020

Role of SRP19 in assembly of the Archaeoglobus fulgidus signal recognition particle

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12 December 2020

Signal sequence recognition and protein targeting

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12 December 2020

A model recognition approach to the prediction of all-helical membrane protein structure and topology

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12 December 2020

YidC is involved in the biogenesis of anaerobic respiratory complexes in the inner membrane of Escherichia coli.

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12 December 2020

Principles governing amino acid composition of integral membrane proteins: application to topology prediction

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12 December 2020

Signal sequence recognition in posttranslational protein transport across the yeast ER membrane.

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12 December 2020

Post-translational secretion of fusion proteins in the halophilic archaea Haloferax volcanii.

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12 December 2020

Bacterial twin-arginine signal peptide-dependent protein translocation pathway: evolution and mechanism

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12 December 2020

Functional overlap but lack of complete cross-complementation of Streptococcus mutans and Escherichia coli YidC orthologs

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12 December 2020

srb: a Bacillus subtilis Gene Encoding a Homologue of the -Subunit of the Mammalian Signal Recognition Particle Receptor

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12 December 2020

A minimal Tat system from a gram-positive organism: a bifunctional TatA subunit participates in discrete TatAC and TatA complexes

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12 December 2020

Independent gene duplications of the YidC/Oxa/Alb3 family enabled a specialized cotranslational function

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12 December 2020

Binding of secretory precursor polypeptides to a translocon subcomplex is regulated by BiP.

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12 December 2020

Interaction of signal-recognition particle 54 GTPase domain and signal-recognition particle RNA in the free signal-recognition particle

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12 December 2020

Evolution of the prokaryotic protein translocation complex: a comparison of archaeal and bacterial versions of SecDF

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12 December 2020

Protein translocation across the bacterial cytoplasmic membrane.

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12 December 2020

SecDFyajC forms a heterotetrameric complex with YidC.

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12 December 2020

Signal sequences activate the catalytic switch of SRP RNA.

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12 December 2020

Reconstitution of the signal recognition particle of the halophilic archaeon Haloferax volcanii

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12 December 2020

A new twist on an old pathway--accessory Sec [corrected] systems

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12 December 2020

Processing of a membrane protein required for cell-to-cell signaling during endospore formation in Bacillus subtilis

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12 December 2020

FlhF, a signal recognition particle-like GTPase, is involved in the regulation of flagellar arrangement, motility behaviour and protein secretion in Bacillus cereus.

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12 December 2020

Legionella pneumophila Philadelphia-1 tatB and tatC affect intracellular replication and biofilm formation

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12 December 2020

Identification of two Mycobacterium smegmatis lipoproteins exported by a SecA2-dependent pathway

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12 December 2020

The chloroplast Tat pathway utilizes the transmembrane electric potential as an energy source

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12 December 2020

A highly conserved nucleotide in the Alu domain of SRP RNA mediates translation arrest through high affinity binding to SRP9/14

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12 December 2020

Translocation of proteins across the endoplasmic reticulum III. Signal recognition protein (SRP) causes signal sequence-dependent and site-specific arrest of chain elongation that is released by microsomal membranes

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12 December 2020

Species-specific variation in signal peptide design. Implications for protein secretion in foreign hosts

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12 December 2020

Involvement of SecDF and YidC in the membrane insertion of M13 procoat mutants.

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12 December 2020

Export pathway selectivity of Escherichia coli twin arginine translocation signal peptides

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12 December 2020

Bacillus subtilis histone-like protein, HBsu, is an integral component of a SRP-like particle that can bind the Alu domain of small cytoplasmic RNA.

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12 December 2020

Evaluation of methods for the prediction of membrane spanning regions

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12 December 2020

Sec-independent protein translocation in Escherichia coli. A distinct and pivotal role for the TatB protein

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12 December 2020

Glycine residues in the hydrophobic core of the GspB signal sequence route export toward the accessory Sec pathway

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12 December 2020

The Escherichia coli SRP and SecB targeting pathways converge at the translocon

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12 December 2020

The twin-arginine transport system: moving folded proteins across membranes

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12 December 2020

The Bacillus subtilis scRNA is related to the 4.5S RNA from Escherichia coli

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12 December 2020

Conformational transition of Sec machinery inferred from bacterial SecYE structures

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12 December 2020

Functional identification of the product of the Bacillus subtilis yvaL gene as a SecG homologue.

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12 December 2020

Recent advances in the understanding of membrane protein assembly and structure

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12 December 2020

Two electrical potential-dependent steps are required for transport by the Escherichia coli Tat machinery.

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12 December 2020

Inserting proteins into the bacterial cytoplasmic membrane using the Sec and YidC translocases

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12 December 2020

Positively charged residues are important determinants of membrane protein topology

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12 December 2020

A large conformational change of the translocation ATPase SecA

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12 December 2020

Pathway specificity for a ΔpH-dependent precursor thylakoid lumen protein is governed by a 'Sec-avoidance' motif in the transfer peptide and a 'Sec-incompatible' mature protein

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12 December 2020

SRPDB (signal recognition particle database)

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12 December 2020

X-ray structure of a protein-conducting channel

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12 December 2020

Isolation and characterization of bifunctional Escherichia coli TatA mutant proteins that allow efficient tat-dependent protein translocation in the absence of TatB.

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12 December 2020

The signal recognition particle

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12 December 2020

Co-translational protein targeting catalyzed by the Escherichia coli signal recognition particle and its receptor

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12 December 2020

Towards the development of Bacillus subtilis as a cell factory for membrane proteins and protein complexes

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12 December 2020

In vivo assessment of the Tat signal peptide specificity in Escherichia coli.

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12 December 2020

Structures of SRP54 and SRP19, the Two Proteins that Organize the Ribonucleic Core of the Signal Recognition Particle from Pyrococcus furiosus

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12 December 2020

Preprotein translocation by a hybrid translocase composed of Escherichia coli and Bacillus subtilis subunits.

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12 December 2020

The helical hydrophobic moment: a measure of the amphiphilicity of a helix

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12 December 2020

The large first periplasmic loop of SecD and SecF plays an important role in SecDF functioning.

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12 December 2020

The catalytic cycle of the escherichia coli SecA ATPase comprises two distinct preprotein translocation events

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12 December 2020

Determinants of the streptococcal surface glycoprotein GspB that facilitate export by the accessory Sec system.

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12 December 2020

A conserved function of YidC in the biogenesis of respiratory chain complexes.

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12 December 2020

Bioenergetic requirements of a Tat-dependent substrate in the halophilic archaeon Haloarcula hispanica.

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12 December 2020

An accessory sec locus of Streptococcus gordonii is required for export of the surface protein GspB and for normal levels of binding to human platelets.

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12 December 2020

Do transmembrane protein superfolds exist?

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12 December 2020

Differential Interactions between a Twin-Arginine Signal Peptide and Its Translocase in Escherichia coli

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12 December 2020

Mapping the pathways to staphylococcal pathogenesis by comparative secretomics

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12 December 2020

The Bacillus subtilis SRP54 homologue, Ffh, has an intrinsic GTPase activity and forms a ribonucleoprotein complex with small cytoplasmic RNA in vivo.

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12 December 2020

Identification of 113 conserved essential genes using a high-throughput gene disruption system in Streptococcus pneumoniae

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12 December 2020

The ExPortal: an organelle dedicated to the biogenesis of secreted proteins in Streptococcus pyogenes

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12 December 2020

Getting on target: the archaeal signal recognition particle

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12 December 2020

Essential Bacillus subtilis genes

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12 December 2020

Differential roles of individual domains in selection of secretion route of a Streptococcus parasanguinis serine-rich adhesin, Fap1.

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12 December 2020

The TatA component of the twin-arginine protein transport system forms channel complexes of variable diameter

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12 December 2020

An ffh mutant of Streptococcus mutans is viable and able to physiologically adapt to low pH in continuous culture

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12 December 2020

Prediction of protein antigenic determinants from amino acid sequences

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12 December 2020

The crystal structure of the third signal-recognition particle GTPase FlhF reveals a homodimer with bound GTP

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12 December 2020

The crystal structure of the periplasmic domain of the Escherichia coli membrane protein insertase YidC contains a substrate binding cleft

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12 December 2020

An HMM posterior decoder for sequence feature prediction that includes homology information

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12 December 2020

Corynebacterium glutamicum possesses two secA homologous genes that are essential for viability

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12 December 2020

Characterization of Streptococcus gordonii SecA2 as a paralogue of SecA.

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12 December 2020

Membrane Proteins. The Amino Acid Composition of Membrane-Penetrating Segments

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12 December 2020

The signal recognition particle receptor is a complex that contains two distinct polypeptide chains

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12 December 2020

The tatC gene cluster is essential for viability in halophilic archaea.

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12 December 2020

A genome-wide strategy for the identification of essential genes in Staphylococcus aureus

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12 December 2020

The signal recognition particle-targeting pathway does not necessarily deliver proteins to the sec-translocase in Escherichia coli

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12 December 2020

YidC mediates membrane protein insertion in bacteria

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12 December 2020

Export of complex cofactor-containing proteins by the bacterial Tat pathway

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12 December 2020

Crystal structure of the major periplasmic domain of the bacterial membrane protein assembly facilitator YidC

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12 December 2020

Membrane topology of the 60-kDa Oxa1p homologue from Escherichia coli.

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12 December 2020

Improving the accuracy of transmembrane protein topology prediction using evolutionary information

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12 December 2020

The importance of the twin-arginine translocation pathway for bacterial virulence.

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12 December 2020

A proton gradient is required for the transport of two lumenal oxygen-evolving proteins across the thylakoid membrane

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12 December 2020

Transmembrane helices predicted at 95% accuracy

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12 December 2020

Nucleotide control of interdomain interactions in the conformational reaction cycle of SecA

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12 December 2020

Crystal structure of Mycobacterium tuberculosis SecA, a preprotein translocating ATPase

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12 December 2020

The SecDFyajC domain of preprotein translocase controls preprotein movement by regulating SecA membrane cycling

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12 December 2020

Quantitation of de novo localized (15)N-labeled lipoproteins and membrane proteins having one and two transmembrane segments in a Bacillus subtilis secA temperature-sensitive mutant using 2D-PAGE and MALDI-TOF MS.

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12 December 2020

YidC and Oxa1 form dimeric insertion pores on the translating ribosome

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12 December 2020

Membrane composition changes and physiological adaptation by Streptococcus mutans signal recognition particle pathway mutants

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12 December 2020

Assembly of archaeal signal recognition particle from recombinant components

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12 December 2020

Different regions of the nonconserved large periplasmic domain of Escherichia coli YidC are involved in the SecF interaction and membrane insertase activity.

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12 December 2020

Sec- and Tat-mediated protein secretion across the bacterial cytoplasmic membrane--distinct translocases and mechanisms.

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12 December 2020

Defining the Regions of Escherichia coli YidC That Contribute to Activity

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12 December 2020

Isolation of cold-sensitive yidC mutants provides insights into the substrate profile of the YidC insertase and the importance of transmembrane 3 in YidC function

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12 December 2020

Signal recognition particle (SRP), a ubiquitous initiator of protein translocation

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12 December 2020

A novel pathway of intercellular signalling in Bacillus subtilis involves a protein with similarity to a component of type III secretion channels

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12 December 2020

Characterization of the twin-arginine translocase secretion system of Mycobacterium smegmatis

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12 December 2020

The conserved third transmembrane segment of YidC contacts nascent Escherichia coli inner membrane proteins.

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12 December 2020

Signal sequence recognition and protein targeting to the endoplasmic reticulum membrane

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12 December 2020

The Oxa1 Protein Forms a Homooligomeric Complex and Is an Essential Part of the Mitochondrial Export Translocase inNeurospora crassa

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12 December 2020

Monitoring of changes in the membrane proteome during stationary phase adaptation of Bacillus subtilis using in vivo labeling techniques

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12 December 2020

Inactivation of Rv2525c, a substrate of the twin arginine translocation (Tat) system of Mycobacterium tuberculosis, increases beta-lactam susceptibility and virulence

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12 December 2020

Genetic and biochemical analysis of the twin-arginine translocation pathway in halophilic archaea

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12 December 2020

Mechanisms of YidC-mediated insertion and assembly of multimeric membrane protein complexes

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12 December 2020

From complementarity to comprehensiveness--targeting the membrane proteome of growing Bacillus subtilis by divergent approaches

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12 December 2020

Proteomic dissection of potential signal recognition particle dependence in protein secretion by Bacillus subtilis

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12 December 2020

Topological studies on the twin-arginine translocase component TatC.

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12 December 2020

A periplasmic fluorescent reporter protein and its application in high-throughput membrane protein topology analysis.

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12 December 2020

OCTOPUS: improving topology prediction by two-track ANN-based preference scores and an extended topological grammar

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12 December 2020

SecA promotes preprotein translocation by undergoing ATP-driven cycles of membrane insertion and deinsertion.

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12 December 2020

TOPCONS: consensus prediction of membrane protein topology

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12 December 2020

YidC--an evolutionary conserved device for the assembly of energy-transducing membrane protein complexes

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12 December 2020

Subcellular sites for bacterial protein export

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12 December 2020

FlhF, the third signal recognition particle-GTPase of Bacillus subtilis, is dispensable for protein secretion

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12 December 2020

Streptococcal viability and diminished stress tolerance in mutants lacking the signal recognition particle pathway or YidC2.

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12 December 2020

Structure and function of SecA, the preprotein translocase nanomotor

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12 December 2020

Structures of the signal recognition particle receptor from the archaeon Pyrococcus furiosus: implications for the targeting step at the membrane

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12 December 2020

Identification of a twin-arginine translocation system in Pseudomonas syringae pv. tomato DC3000 and its contribution to pathogenicity and fitness

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12 December 2020

The twin arginine translocation system is essential for virulence of Yersinia pseudotuberculosis

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12 December 2020

Prediction of Membrane Protein Topology Utilizing Multiple Sequence Alignments

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12 December 2020

Purified components of the Escherichia coli Tat protein transport system form a double-layered ring structure

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12 December 2020

Signal peptide hydrophobicity is critical for early stages in protein export by Bacillus subtilis.

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12 December 2020

Complementary analysis of the vegetative membrane proteome of the human pathogen Staphylococcus aureus

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12 December 2020

Heterodimeric GTPase Core of the SRP Targeting Complex

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12 December 2020

Selective contribution of the twin-arginine translocation pathway to protein secretion in Bacillus subtilis

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12 December 2020

The twin-arginine translocation pathway is a major route of protein export in Streptomyces coelicolor

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12 December 2020

10.1007/S00018-009-0160-X

Identifiers

DOI

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21 August 2017

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