Computational methods for discovering structural variation with next-generation sequencing (Q37618538)

21 August 2017

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title

Computational methods for discovering structural variation with next-generation sequencing (English)

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21 August 2017

3

Michael Brudno

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21 August 2017

Paul Medvedev

1

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21 August 2017

Monica Stanciu

series ordinal

2

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21 August 2017

publication date

1 November 2009

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21 August 2017

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21 August 2017

volume

6

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21 August 2017

issue

11 Suppl

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21 August 2017

page(s)

S13-20

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describes a project that uses

21 August 2017

massive parallel sequencing

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https://scigraph.springernature.com/pub.10.1038/nmeth.1374

inferred from title

exact match

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cites work

Detection of large-scale variation in the human genome

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Fine-scale structural variation of the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Paired-end mapping reveals extensive structural variation in the human genome

21 January 2018

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https://api.crossref.org/works/10.1038%2FNMETH.1374

Structural variation in the human genome

21 January 2018

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https://api.crossref.org/works/10.1038%2FNMETH.1374

Mapping and sequencing of structural variation from eight human genomes

21 January 2018

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https://api.crossref.org/works/10.1038%2FNMETH.1374

Integrated detection and population-genetic analysis of SNPs and copy number variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Systematic assessment of copy number variant detection via genome-wide SNP genotyping

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

A robust framework for detecting structural variations in a genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Accurate whole human genome sequencing using reversible terminator chemistry

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

MoDIL: detecting small indels from clone-end sequencing with mixtures of distributions

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Copy-number variation and association studies of human disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

A census of human cancer genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Mutational and selective effects on copy-number variants in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

End-sequence profiling: sequence-based analysis of aberrant genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Reconstructing tumor genome architectures

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Strong association of de novo copy number mutations with autism

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

alpha-Synuclein locus triplication causes Parkinson's disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Analysis of copy number variants and segmental duplications in the human genome: Evidence for a change in the process of formation in recent evolutionary history

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Large-scale copy number polymorphism in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Segmental duplications and copy-number variation in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Methods and strategies for analyzing copy number variation using DNA microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

A haplotype map of the human genome

21 January 2018

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https://api.crossref.org/works/10.1038%2FNMETH.1374

A worldwide survey of haplotype variation and linkage disequilibrium in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Common deletions and SNPs are in linkage disequilibrium in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Common deletion polymorphisms in the human genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Primer: Sequencing--the next generation

21 January 2018

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https://api.crossref.org/works/10.1038%2FNMETH.1374

Next-generation DNA sequencing

21 January 2018

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https://api.crossref.org/works/10.1038%2FNMETH.1374

Next-generation DNA sequencing techniques

21 January 2018

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https://api.crossref.org/works/10.1038%2FNMETH.1374

Evaluation of paired-end sequencing strategies for detection of genome rearrangements in cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Identification of somatically acquired rearrangements in cancer using genome-wide massively parallel paired-end sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

An initial map of insertion and deletion (INDEL) variation in the human genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Recent segmental duplications in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

A genome-wide comparison of recent chimpanzee and human segmental duplications

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Substantial biases in ultra-short read data sets from high-throughput DNA sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Evaluation of next generation sequencing platforms for population targeted sequencing studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

PEMer: a computational framework with simulation-based error models for inferring genomic structural variants from massive paired-end sequencing data

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

BreakDancer: an algorithm for high-resolution mapping of genomic structural variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

High-resolution mapping of copy-number alterations with massively parallel sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Real-time DNA sequencing from single polymerase molecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

A comprehensive analysis of common copy-number variations in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Global variation in copy number in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

Refinement of a chimpanzee pericentric inversion breakpoint to a segmental duplication cluster

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1374

A high-resolution survey of deletion polymorphism in the human genome

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19844226

12 December 2020

inferred from PubMed ID database lookup

1 reference

https://pubmed.ncbi.nlm.nih.gov/19844226

12 December 2020

inferred from PubMed ID database lookup

Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19844226

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1038/NMETH.1374

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Dimensions Publication ID

21 August 2017

1019637093

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Fatcat ID

release_acigxzhwgzgm3o6adgdmyo4prq

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Fatcat

https://api.fatcat.wiki/v0/release/acigxzhwgzgm3o6adgdmyo4prq

24 November 2022

mapped directly with Wikidata item

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