Many of the conserved nucleotides of tRNA(Phe) are not essential for ternary complex formation and peptide elongation. (Q37632670)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8194535%20AND%20SRC:MED&resulttype=core&format=json

26 October 2019

title

Many of the conserved nucleotides of tRNA(Phe) are not essential for ternary complex formation and peptide elongation (English)

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26 October 2019

author name string

I A Nazarenko

series ordinal

1

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26 October 2019

K M Harrington

series ordinal

2

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26 October 2019

O C Uhlenbeck

series ordinal

3

1 reference

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26 October 2019

language of work or name

English

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publication date

1 May 1994

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26 October 2019

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26 October 2019

volume

13

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26 October 2019

issue

10

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26 October 2019

page(s)

2464-2471

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Aminoacyl RNA domain of turnip yellow mosaic virus Val-RNA interacting with elongation factor Tu

26 October 2019

cites work

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Pleiotrophic effects of point mutations in yeast tRNA(Asp) on the base modification pattern

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Crystal structure of active elongation factor Tu reveals major domain rearrangements

23 August 2017

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Selection for active E. coli tRNA(Phe) variants from a randomized library using two proteins

23 August 2017

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Relative affinities of all Escherichia coli aminoacyl-tRNAs for elongation factor Tu-GTP

23 August 2017

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Adenylyl imidodiphosphate, an adenosine triphosphate analog containing a P--N--P linkage

23 August 2017

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Substrate recognition and identification of splice sites by the tRNA-splicing endonuclease and ligase from Saccharomyces cerevisiae

23 August 2017

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Mutants of Escherichia coli formylmethionine tRNA: a single base change enables initiator tRNA to act as an elongator in vitro

23 August 2017

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Biochemical and physical characterization of an unmodified yeast phenylalanine transfer RNA transcribed in vitro

23 August 2017

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Nucleotides in yeast tRNAPhe required for the specific recognition by its cognate synthetase

23 August 2017

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Interaction of elongation factors EF-G and EF-Tu with a conserved loop in 23S RNA.

23 August 2017

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Sites of interaction of the CCA end of peptidyl-tRNA with 23S rRNA.

23 August 2017

1 reference

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Striking effects of coupling mutations in the acceptor stem on recognition of tRNAs by Escherichia coli Met-tRNA synthetase and Met-tRNA transformylase

23 August 2017

1 reference

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Stimulation of Escherichia coli elongation factor Tu-dependent GTP hydrolysis by aminoacyl oligonucleotides in the presence of aurodox

23 August 2017

1 reference

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Interaction of unfolded tRNA with the 3'-terminal region of E. coli 16S ribosomal RNA.

6 September 2017

1 reference

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Regions of tRNA important for binding to the ribosomal A and P sites

6 September 2017

1 reference

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Site-directed cross-linking studies on theE.colitRNA ribosome complex: determination of sites labelled with an aromatic azide attached to the variable loop or aminoacyl group of tRNA

6 September 2017

1 reference

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Crosslinking of elongation factor Tu to tRNA(Phe) by trans-diamminedichloroplatinum (II). Characterization of two crosslinking sites in the tRNA.

14 September 2017

1 reference

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Crosslinking of tRNA containing a long extra arm to elongation factor Tu by trans-diamminedichloroplatinum(II).

14 September 2017

1 reference

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Nucleotides in precursor tRNAs that are required intact for catalysis by RNase P RNAs

14 September 2017

1 reference

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Direct tRNA-protein interactions in ribosomal complexes

14 September 2017

1 reference

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tRNA structure and aminoacylation efficiency.

14 September 2017

1 reference

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Specificity of Elongation Factor Tu from Escherichia coli with Respect to Attachment of the Amino Acid to the 2' or 3'-Hydroxyl Group of the Terminal Adenosine of tRNA

28 September 2017

1 reference

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The site of interaction of aminoacyl-tRNA with elongation factor Tu

28 September 2017

1 reference

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Substrate recognition and splice site determination in yeast tRNA splicing

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395112

Interaction of cinnamyl‐tRNAPhe with Escherichia coli elongation factor Tu

28 September 2017

1 reference

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The function of pseudouridylic acid in transfer ribonucleic acid. II. Inhibition of amino acyl transfer ribonucleic acid-ribosome complex formation by ribothymidylyl-pseudouridylyl-cytidylyl-guanosine 3'-phosphate.

25 June 2018

1 reference

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Studies on the polypeptide elongation factors from E. coli. V. Properties of various complexes containing EF-Tu and EF-Ts.

25 June 2018

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The involvement of 5S RNA in the binding of tRNA to ribosomes

25 June 2018

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Inactivation of T u factor-guanosine triphosphate recognition and ribosome-binding ability by terminal oxidation-reduction of yeast phenylalanine transfer ribonucleic acid.

25 June 2018

1 reference

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Kinetic studies of Escherichia coli elongation factor Tu-guanosine 5'-triphosphate-aminoacyl-tRNA complexes

25 June 2018

1 reference

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Direct determination of the association constant between elongation factor Tu X GTP and aminoacyl-tRNA using fluorescence.

25 June 2018

1 reference

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Affinities of tRNA binding sites of ribosomes from Escherichia coli.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395112

The reaction of ribosomes with elongation factor Tu.GTP complexes. Aminoacyl-tRNA-independent reactions in the elongation cycle determine the accuracy of protein synthesis.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395112

The recognition by RNase P of precursor tRNAs

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395112

Changing the identity of a transfer RNA.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395112

Quantitative indicator assay of tRNA binding to the ribosomal P and A sites.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395112

Anticodon switching changes the identity of methionine and valine transfer RNAs.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395112

Effect of replacing uridine 33 in yeast tRNAPhe on the reaction with ribosomes.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395112

Binding of tRNA to the ribosomal A and P sites protects two distinct sets of nucleotides in 16 S rRNA.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395112

Lead-catalyzed cleavage of yeast tRNAPhe mutants

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395112

The length of the aminoacyl-acceptor stem of the selenocysteine-specific tRNA(Sec) of Escherichia coli is the determinant for binding to elongation factors SELB or Tu.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395112

Stabilization of the Escherichia coli elongation factor Tu-GTP-aminoacyl-tRNA complex.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395112

Determination of recognition nucleotides for Escherichia coli phenylalanyl-tRNA synthetase

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395112

The behaviour of phenylalanine transfer ribonucleic acid with 3′-terminal formycin in protein biosynthesis using a rabbit reticulocyte cell-free system

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395112

In vitro analysis of translational rate and accuracy with an unmodified tRNA

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395112

Changes in aminoacyl transfer ribonucleic acid conformation upon association with elongation factor Tu-guanosine 5'-triphosphate. fluorescence studies of ternary complex conformation and topology

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395112

Site-specific mutagenesis on a human initiator methionine tRNA gene within a sequence conserved in all eukaryotic initiator tRNAs and studies of its effects on in vitro transcription

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395112

The GTPase activity of elongation factor Tu and the 3'-terminal end of aminoacyl-tRNA

1 September 2018

1 reference

12 December 2020

Single turnover kinetic studies of guanosine triphosphate hydrolysis and peptide formation in the elongation factor Tu-dependent binding of aminoacyl-tRNA to Escherichia coli ribosomes

1 reference

12 December 2020

Apparent association constants of tRNAs for the ribosomal A, P, and E sites

1 reference

12 December 2020

The Ribosomal Elongation Cycle: tRNA Binding, Translocation and tRNA Release

1 reference

12 December 2020

A study of the interaction of Escherichia coli elongation factor-Tu with aminoacyl-tRNAs by partial digestion with cobra venom ribonuclease

1 reference

12 December 2020

Crosslinking of phenylalanyl-tRNA to the ribosomal A site via a photoaffinity probe attached to the 4-thiouridine residue is exclusively to ribosomal protein S19

1 reference

12 December 2020

Isolation, characterization and structural implications of a nuclease-digested complex of aminoacyl transfer RNA and Escherichia coli elongation factor Tu

1 reference

12 December 2020

Time-resolved fluorescence studies on the ternary complex formed between bacterial elongation factor Tu, guanosine 5'-triphosphate, and phenylalanyl-tRNAPhe

1 reference

12 December 2020

Site selection by the tRNA splicing endonuclease of Xenopus laevis

1 reference

12 December 2020

The influence of elongation-factor-Tu . GTP and anticodon-anticodon interactions on the anticodon loop conformation of yeast tRNATyr

1 reference

12 December 2020

Binding of yeast tRNAphe anticodon arm to Escherichia coli 30 S ribosomes

1 reference

12 December 2020

Importance of conserved residues for the conformation of the T-loop in tRNAs

1 reference

12 December 2020

The rate of cleavage of GTP on the binding of Phe-tRNA.elongation factor Tu.GTP to poly(U)-programmed ribosomes of Escherichia coli

1 reference

12 December 2020

The elongation factor Tu binds aminoacyl-tRNA in the presence of GDP

1 reference

12 December 2020

A simple rapid mixing device

1 reference

12 December 2020

Interaction of Escherichia coli EF-Tu.GTP and EF-Tu.GDP with analogues of the 3' terminus of aminoacyl-tRNA

1 reference

12 December 2020

10.1002/J.1460-2075.1994.TB06531.X

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8194535%20AND%20SRC:MED&resulttype=core&format=json

26 October 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8194535%20AND%20SRC:MED&resulttype=core&format=json

26 October 2019

PubMed publication ID

8194535

1 reference