rSNPBase: a database for curated regulatory SNPs (Q37661749)

21 August 2017

rSNPBase: a database for curated regulatory SNPs (English)

1 reference

21 August 2017

0 references

Liyuan Guo

1

1 reference

21 August 2017

Yang Du

2

1 reference

21 August 2017

Suhua Chang

3

1 reference

21 August 2017

Kunlin Zhang

4

1 reference

21 August 2017

Jing Wang

5

1 reference

21 August 2017

language of work or name

English

0 references

publication date

26 November 2013

1 reference

21 August 2017

Nucleic Acids Research

1 reference

21 August 2017

42

1 reference

21 August 2017

Database issue

1 reference

21 August 2017

D1033-9

1 reference

Creative Commons Attribution-NonCommercial 3.0 Unported

21 August 2017

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

0 references

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

ENCODE data in the UCSC Genome Browser: year 5 update

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

Annotation of functional variation in personal genomes using RegulomeDB

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

Linking disease associations with regulatory information in the human genome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

The accessible chromatin landscape of the human genome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

Large-scale computational identification of regulatory SNPs with rSNP-MAPPER.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

PolymiRTS Database 2.0: linking polymorphisms in microRNA target sites with human diseases and complex traits

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

CpG islands and the regulation of transcription

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

Histone H3K27ac separates active from poised enhancers and predicts developmental state

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

miRTarBase: a database curates experimentally validated microRNA-target interactions

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

miRBase: integrating microRNA annotation and deep-sequencing data

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

A map of human genome variation from population-scale sequencing

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

Integrating common and rare genetic variation in diverse human populations

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

Genetics and beyond--the transcriptome of human monocytes and disease susceptibility

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

Understanding mechanisms underlying human gene expression variation with RNA sequencing

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

Transcriptome genetics using second generation sequencing in a Caucasian population

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

SCAN: SNP and copy number annotation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

Patrocles: a database of polymorphic miRNA-mediated gene regulation in vertebrates

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

Potential etiologic and functional implications of genome-wide association loci for human diseases and traits

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

miR2Disease: a manually curated database for microRNA deregulation in human disease

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

High-resolution mapping of expression-QTLs yields insight into human gene regulation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

Mapping the genetic architecture of gene expression in human liver

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

Gene regulation in the third dimension

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

RNA-binding proteins and post-transcriptional gene regulation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

SNP@Promoter: a database of human SNPs (single nucleotide polymorphisms) within the putative promoter regions

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

In silico detection of sequence variations modifying transcriptional regulation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

F-SNP: computationally predicted functional SNPs for disease association studies

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

Population genomics of human gene expression

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

The landscape of histone modifications across 1% of the human genome in five human cell lines

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

High-resolution profiling of histone methylations in the human genome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

PolymiRTS Database: linking polymorphisms in microRNA target sites with complex traits

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

FASTSNP: an always up-to-date and extendable service for SNP function analysis and prioritization.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

FESD: a Functional Element SNPs Database in human

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

The ENCODE (ENCyclopedia Of DNA Elements) Project

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

Distinct localization of histone H3 acetylation and H3-K4 methylation to the transcription start sites in the human genome.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

dbSNP: the NCBI database of genetic variation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

Identification of functional cis-regulatory polymorphisms in the human genome.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

Point mutations within 663-666 bp of intron 6 of the human TDO2 gene, associated with a number of psychiatric disorders, damage the YY-1 transcription factor binding site.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

rSNP_Guide, a database system for analysis of transcription factor binding to DNA with variations: application to genome annotation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

seeQTL: a searchable database for human eQTLs

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

is-rSNP: a novel technique for in silico regulatory SNP detection

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

1000 genomes: a world of variation

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964952

An integrated encyclopedia of DNA elements in the human genome

1 September 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKT1167

Investigating the relationship of DNA methylation with mutation rate and allele frequency in the human genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKT1167

The Genotype-Tissue Expression (GTEx) project

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKT1167

A survey of genetic human cortical gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKT1167

SNP Function Portal: a web database for exploring the function implication of SNP alleles

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKT1167

ssSNPTarget: genome-wide splice-site Single Nucleotide Polymorphism database

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24285297

12 December 2020

inferred from PubMed ID database lookup

Three novel sequence variations in the 5' upstream region of the cystic fibrosis transmembrane conductance regulator (CFTR) gene: two polymorphisms and one putative molecular defect

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24285297

12 December 2020

inferred from PubMed ID database lookup

Genome-wide identification of SNPs in microRNA genes and the SNP effects on microRNA target binding and biogenesis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24285297

12 December 2020

inferred from PubMed ID database lookup

Identifiers

1 reference

https://api.fatcat.wiki/v0/release/rdwqbunev5h2dkfnmbingrmguu

30 July 2022

DBLP publication ID

journals/nar/GuoDCZ014

1 reference

DBLP Dataset 2021-01-02

release_rdwqbunev5h2dkfnmbingrmguu

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/rdwqbunev5h2dkfnmbingrmguu

30 July 2022

https://api.fatcat.wiki/v0/release/rdwqbunev5h2dkfnmbingrmguu

1 reference

30 July 2022

https://api.fatcat.wiki/v0/release/rdwqbunev5h2dkfnmbingrmguu

1 reference

30 July 2022