Preprocessing and downstream analysis of microarray DNA copy number profiles (Q37695981)

22 August 2017

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title

Preprocessing and downstream analysis of microarray DNA copy number profiles (English)

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22 August 2017

4

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22 August 2017

Mark A van de Wiel

1

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PubMed ID

20172948

22 August 2017

Franck Picard

series ordinal

2

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PubMed ID

20172948

22 August 2017

Wessel N van Wieringen

series ordinal

3

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22 August 2017

19 February 2010

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Briefings in Bioinformatics

22 August 2017

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22 August 2017

12

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22 August 2017

1

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22 August 2017

10-21

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High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays

22 August 2017

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Clinical utility of array CGH for the detection of chromosomal imbalances associated with mental retardation and multiple congenital anomalies

21 January 2018

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The pitfalls of platform comparison: DNA copy number array technologies assessed

21 January 2018

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CGH microarrays and cancer

21 January 2018

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Microarray data analysis: from disarray to consolidation and consensus

21 January 2018

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Experimental design and data analysis for array comparative genomic hybridization

21 January 2018

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Breaking the waves: improved detection of copy number variation from microarray-based comparative genomic hybridization.

21 January 2018

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Adjustment of genomic waves in signal intensities from whole-genome SNP genotyping platforms

21 January 2018

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Smoothing waves in array CGH tumor profiles

21 January 2018

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Normalization of array-CGH data: influence of copy number imbalances

21 January 2018

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A probe-density-based analysis method for array CGH data: simulation, normalization and centralization.

21 January 2018

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BioHMM: a heterogeneous hidden Markov model for segmenting array CGH data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBQ004

Continuous-index hidden Markov modelling of array CGH copy number data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBQ004

Circular binary segmentation for the analysis of array-based DNA copy number data

21 January 2018

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Regularized gene selection in cancer microarray meta-analysis

21 January 2018

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Robust smooth segmentation approach for array CGH data analysis

21 January 2018

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Denoising array-based comparative genomic hybridization data using wavelets

21 January 2018

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Comparative analysis of algorithms for identifying amplifications and deletions in array CGH data

21 January 2018

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A comparison study: applying segmentation to array CGH data for downstream analyses

21 January 2018

1 reference

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CGHcall: calling aberrations for array CGH tumor profiles.

21 January 2018

1 reference

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A segmentation/clustering model for the analysis of array CGH data

21 January 2018

1 reference

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Genomic copy number determination in cancer cells from single nucleotide polymorphism microarrays based on quantitative genotyping corrected for aneuploidy.

21 January 2018

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Estimation of tumor heterogeneity using CGH array data

21 January 2018

1 reference

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Sparse representation and Bayesian detection of genome copy number alterations from microarray data

21 January 2018

1 reference

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ADaCGH: A parallelized web-based application and R package for the analysis of aCGH data

21 January 2018

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A single-sample method for normalizing and combining full-resolution copy numbers from multiple platforms, labs and analysis methods

21 January 2018

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Integrated analysis of homozygous deletions, focal amplifications, and sequence alterations in breast and colorectal cancers

21 January 2018

1 reference

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Weighted clustering of called array CGH data

21 January 2018

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Accounting for uncertainty when assessing association between copy number and disease: a latent class model

21 January 2018

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Using array-comparative genomic hybridization to define molecular portraits of primary breast cancers.

21 January 2018

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Cross-platform array comparative genomic hybridization meta-analysis separates hematopoietic and mesenchymal from epithelial tumors

21 January 2018

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Distance-based clustering of CGH data

21 January 2018

1 reference

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Markers improve clustering of CGH data

21 January 2018

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Array CGH demonstrates characteristic aberration signatures in human papillary thyroid carcinomas governed by RET/PTC.

21 January 2018

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Model-based clustering of array CGH data

21 January 2018

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Classification of arrayCGH data using fused SVM.

21 January 2018

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Aneuploidy prediction and tumor classification with heterogeneous hidden conditional random fields

21 January 2018

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Computational methods for identification of recurrent copy number alteration patterns by array CGH.

21 January 2018

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Detection of recurrent copy number alterations in the genome: taking among-subject heterogeneity seriously

21 January 2018

1 reference

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Modeling recurrent DNA copy number alterations in array CGH data

21 January 2018

1 reference

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Structural variation in the human genome

21 January 2018

1 reference

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Methods and strategies for analyzing copy number variation using DNA microarrays

21 January 2018

1 reference

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Characterizing the cancer genome in lung adenocarcinoma

21 January 2018

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21 January 2018

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Bioconductor: open software development for computational biology and bioinformatics

21 January 2018

1 reference

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Global search for chromosomal abnormalities in infiltrating ductal carcinoma of the breast using array-comparative genomic hybridization

21 January 2018

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21 January 2018

Identifiers

DOI

10.1093/BIB/BBQ004

1 reference

22 August 2017

journals/bib/WielPWY11

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

PubMed ID

20172948