Genomes of the T4-related bacteriophages as windows on microbial genome evolution (Q37804481)

23 August 2017

8 references

30 June 2019

20 June 2019

2 August 2019

7 August 2019

14 September 2019

3 November 2019

21 October 2020

30 October 2020

Genomes of the T4-related bacteriophages as windows on microbial genome evolution (English)

1 reference

23 August 2017

1 reference

2 August 2019

1 reference

7 August 2019

1 reference

14 September 2019

1 reference

3 November 2019

2 references

21 October 2020

1 reference

30 October 2020

Vasiliy M Petrov

1

1 reference

23 August 2017

Swarnamala Ratnayaka

2

1 reference

23 August 2017

James M Nolan

3

1 reference

23 August 2017

Eric S Miller

4

1 reference

23 August 2017

Jim D Karam

5

1 reference

23 August 2017

28 October 2010

9 references

23 August 2017

30 June 2019

20 June 2019

2 August 2019

7 August 2019

14 September 2019

3 November 2019

21 October 2020

30 October 2020

9 references

23 August 2017

30 June 2019

20 June 2019

2 August 2019

7 August 2019

14 September 2019

3 November 2019

21 October 2020

30 October 2020

7

1 reference

23 August 2017

292

1 reference

Creative Commons Attribution 2.0 Generic

23 August 2017

8 references

30 June 2019

20 June 2019

2 August 2019

7 August 2019

14 September 2019

3 November 2019

21 October 2020

Evidence for a lineage of virulent bacteriophages that target Campylobacter

30 October 2020

0 references

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Classification of Myoviridae bacteriophages using protein sequence similarity

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Scientific serendipity initiates an intron odyssey.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Mystery of intron gain: new data and new models

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Bacteriophage lysins as effective antibacterials

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Comparative genomics of the mycobacteriophages: insights into bacteriophage evolution

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Characterization of extended-host-range pseudo-T-even bacteriophage Kpp95 isolated on Klebsiella pneumoniae

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Comparative genomics and the evolution of prokaryotes.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

5500 Phages examined in the electron microscope

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Plasticity of the gene functions for DNA replication in the T4-like phages

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Genetic diversity among five T4-like bacteriophages

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Marine T4-type bacteriophages, a ubiquitous component of the dark matter of the biosphere

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Three Prochlorococcus cyanophage genomes: signature features and ecological interpretations

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Homing into the origin of the AP2 DNA binding domain

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Isolation of Escherichia coli bacteriophages from the stool of pediatric diarrhea patients in Bangladesh

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

The genome of bacteriophage T4: an archeological dig.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Determination of the core of a minimal bacterial gene set

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Homing endonucleases encoded by germ line-limited genes in Tetrahymena thermophila have APETELA2 DNA binding domains

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Distribution, sequence homology, and homing of group I introns among T-even-like bacteriophages: evidence for recent transfer of old introns

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Evolution of minimal-gene-sets in host-dependent bacteria.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

6 September 2017

Bacteriophage T4 Genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

The Phage Proteomic Tree: a genome-based taxonomy for phage

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Snapshot of the genome of the pseudo-T-even bacteriophage RB49.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Intronless homing: site-specific endonuclease SegF of bacteriophage T4 mediates localized marker exclusion analogous to homing endonucleases of group I introns

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Phage genomics: small is beautiful

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Phylogeny of the major head and tail genes of the wide-ranging T4-type bacteriophages

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Barriers to intron promiscuity in bacteria

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

The murky origin of Snow White and her T-even dwarfs

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Recombination and recombination-dependent DNA replication in bacteriophage T4.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Sequence specificity of in vivo reverse splicing of the Tetrahymena group I intron

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

The genome of the pseudo T-even bacteriophages, a diverse group that resembles T4.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Physical mapping and cloning of bacteriophage T4 anti-restriction endonuclease gene

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Comparative genetics of the T-even bacteriophages.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Inhibition of transcription of cytosine-containing DNA in vitro by the alc gene product of bacteriophage T4.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

The phage T4 nrdB intron: a deletion mutant of a version found in the wild

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Artificial mobile DNA element constructed from the EcoRI endonuclease gene

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Imbroglios of viral taxonomy: genetic exchange and failings of phenetic approaches

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Divergence of a DNA replication gene cluster in the T4-related bacteriophage RB69.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Complete genome sequence of the broad-host-range vibriophage KVP40: comparative genomics of a T4-related bacteriophage

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Phage T4 mobE promotes trans homing of the defunct homing endonuclease I-TevIII.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

An RNA hairpin sequesters the ribosome binding site of the homing endonuclease mobE gene

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Genome analysis of phage JS98 defines a fourth major subgroup of T4-like phages in Escherichia coli

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

The genome of S-PM2, a "photosynthetic" T4-type bacteriophage that infects marine Synechococcus strains

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

SegG endonuclease promotes marker exclusion and mediates co-conversion from a distant cleavage site

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Nucleotide sequence and revised map location of the arn gene from bacteriophage T4.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

A non-essential domain of Escherichia coli RNA polymerase required for the action of the termination factor Alc.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Genetic insertions and diversification of the PolB-type DNA polymerase (gp43) of T4-related phages

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Comparative genomics of marine cyanomyoviruses reveals the widespread occurrence of Synechococcus host genes localized to a hyperplastic region: implications for mechanisms of cyanophage evolution.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

A free-standing homing endonuclease targets an intron insertion site in the psbA gene of cyanophages.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Genomic and structural analysis of Syn9, a cyanophage infecting marine Prochlorococcus and Synechococcus

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

A selective barrier to horizontal gene transfer in the T4-type bacteriophages that has preserved a core genome with the viral replication and structural genes

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

A catalogue of T4-type bacteriophages.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Modular organization of T4 DNA polymerase. Evidence from phylogenetics

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Evolution of RNA-binding specificity in T4 DNA polymerase

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2993671

Electron microscope heteroduplex study of sequence relations of T2, T4, and T6 bacteriophage DNAs

1 October 2018

1 reference

12 December 2020

Phage-coded protein prevents restriction of unmodified progeny T4 DNA

1 reference

12 December 2020

T4 phages against Escherichia coli diarrhea: potential and problems

1 reference

12 December 2020

Bacteriophages with tails: chasing their origins and evolution

1 reference

12 December 2020

The fine structure of the gene

1 reference

12 December 2020

Reinventing phage therapy: are the parts greater than the sum?

1 reference

12 December 2020

Modular architecture of the T4 phage superfamily: a conserved core genome and a plastic periphery

1 reference

12 December 2020

Identifiers

DOI

10.1186/1743-422X-7-292

1 reference

23 August 2017

1 reference

23 August 2017

PubMed publication ID

21029436

1 reference