miRNA sponges: soaking up miRNAs for regulation of gene expression. (Q38174563)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24375960%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

title

miRNA sponges: soaking up miRNAs for regulation of gene expression (English)

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3 March 2020

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24375960%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

Jacob Giehm Mikkelsen

series ordinal

2

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3 March 2020

author name string

Rasmus O Bak

series ordinal

1

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30 August 2017

Jacob Giehm Mikkelsen

series ordinal

2

1 reference

30 August 2017

23 December 2013

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Wiley interdisciplinary reviews. RNA

3 March 2020

published in

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24375960%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

volume

5

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3 March 2020

issue

3

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3 March 2020

page(s)

317-333

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Identification of novel genes coding for small expressed RNAs

3 March 2020

cites work

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An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans

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An extensive class of small RNAs in Caenorhabditis elegans

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Micro RNAs are complementary to 3' UTR sequence motifs that mediate negative post-transcriptional regulation

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Many roads to maturity: microRNA biogenesis pathways and their regulation

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Most mammalian mRNAs are conserved targets of microRNAs

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Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets

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Target mimicry provides a new mechanism for regulation of microRNA activity

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A coding-independent function of gene and pseudogene mRNAs regulates tumour biology

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Down-regulation of a host microRNA by a Herpesvirus saimiri noncoding RNA

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Coding-independent regulation of the tumor suppressor PTEN by competing endogenous mRNAs

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MicroRNA genes are transcribed by RNA polymerase II

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RNA polymerase III transcribes human microRNAs

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The nuclear RNase III Drosha initiates microRNA processing

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Molecular basis for the recognition of primary microRNAs by the Drosha-DGCR8 complex

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Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs

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Dicer recognizes the 5' end of RNA for efficient and accurate processing

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Prediction of plant microRNA targets

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Prediction of mammalian microRNA targets

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MicroRNAs: target recognition and regulatory functions

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Silencing of microRNAs in vivo with 'antagomirs'

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The impact of microRNAs on protein output

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Argonaute2 is the catalytic engine of mammalian RNAi

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Expanding the microRNA targeting code: functional sites with centered pairing

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RNA interference is mediated by 21- and 22-nucleotide RNAs

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Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA

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Inhibition of translational initiation by Let-7 MicroRNA in human cells

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Short RNAs repress translation after initiation in mammalian cells.

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Mammalian microRNAs predominantly act to decrease target mRNA levels

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Gene silencing by microRNAs: contributions of translational repression and mRNA decay

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Kinetic analysis reveals successive steps leading to miRNA-mediated silencing in mammalian cells

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miRNA-mediated gene silencing by translational repression followed by mRNA deadenylation and decay

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Ribosome profiling shows that miR-430 reduces translation before causing mRNA decay in zebrafish

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Translational inhibition by deadenylation-independent mechanisms is central to microRNA-mediated silencing in zebrafish.

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PABP is not essential for microRNA-mediated translational repression and deadenylation in vitro

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Posttranscriptional upregulation by microRNAs

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Chromatin structure analyses identify miRNA promoters

21 January 2018

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Microarray profiling of microRNAs reveals frequent coexpression with neighboring miRNAs and host genes

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Structure and activity of putative intronic miRNA promoters

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c-Myc-regulated microRNAs modulate E2F1 expression

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The time of appearance of the C. elegans let-7 microRNA is transcriptionally controlled utilizing a temporal regulatory element in its promoter

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A C. elegans genome-scale microRNA network contains composite feedback motifs with high flux capacity.

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Steroidal regulation of uterine miRNAs is associated with modulation of the miRNA biogenesis components Exportin-5 and Dicer1.

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Prolyl 4-hydroxylation regulates Argonaute 2 stability

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The let-7 target gene mouse lin-41 is a stem cell specific E3 ubiquitin ligase for the miRNA pathway protein Ago2

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Phosphorylation of human Argonaute proteins affects small RNA binding.

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Hyaluronan-CD44 interaction with protein kinase C(epsilon) promotes oncogenic signaling by the stem cell marker Nanog and the Production of microRNA-21, leading to down-regulation of the tumor suppressor protein PDCD4, anti-apoptosis, and chemothera

21 January 2018

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Modulation of microRNA processing by p53

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Maturation of microRNA is hormonally regulated by a nuclear receptor

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Posttranscriptional regulation of miRNAs harboring conserved terminal loops.

21 January 2018

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Selective blockade of microRNA processing by Lin28

21 January 2018

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The RNA-binding protein KSRP promotes the biogenesis of a subset of microRNAs

21 January 2018

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Smad proteins bind a conserved RNA sequence to promote microRNA maturation by Drosha

21 January 2018

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A splicing-independent function of SF2/ASF in microRNA processing

21 January 2018

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BRCA1 regulates microRNA biogenesis via the DROSHA microprocessor complex

21 January 2018

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Relief of microRNA-mediated translational repression in human cells subjected to stress

21 January 2018

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RNA-binding protein Dnd1 inhibits microRNA access to target mRNA

21 January 2018

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Functional interplay between RNA-binding protein HuR and microRNAs

21 January 2018

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HuR recruits let-7/RISC to repress c-Myc expression

21 January 2018

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Transcriptome-wide analysis of regulatory interactions of the RNA-binding protein HuR.

21 January 2018

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Integrative regulatory mapping indicates that the RNA-binding protein HuR couples pre-mRNA processing and mRNA stability

21 January 2018

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Site-selective versus promiscuous A-to-I editing

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Systematic identification of abundant A-to-I editing sites in the human transcriptome

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RNA editing of a miRNA precursor

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Modulation of microRNA processing and expression through RNA editing by ADAR deaminases

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RNA editing of the microRNA-151 precursor blocks cleavage by the Dicer-TRBP complex

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Frequency and fate of microRNA editing in human brain

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Redirection of silencing targets by adenosine-to-inosine editing of miRNAs

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Attenuated adenosine-to-inosine editing of microRNA-376a* promotes invasiveness of glioblastoma cells

21 January 2018

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Hypothesis: RNA editing of microRNA target sites in humans?

21 January 2018

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Polymorphisms in microRNA targets: a gold mine for molecular epidemiology

21 January 2018

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Proliferating cells express mRNAs with shortened 3' untranslated regions and fewer microRNA target sites

21 January 2018

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The loop position of shRNAs and pre-miRNAs is critical for the accuracy of dicer processing in vivo

21 January 2018

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Naturally occurring variations in sequence length creates microRNA isoforms that differ in argonaute effector complex specificity.

21 January 2018

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A comprehensive survey of 3' animal miRNA modification events and a possible role for 3' adenylation in modulating miRNA targeting effectiveness

21 January 2018

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TUT4 in concert with Lin28 suppresses microRNA biogenesis through pre-microRNA uridylation

21 January 2018

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Selective stabilization of mammalian microRNAs by 3' adenylation mediated by the cytoplasmic poly(A) polymerase GLD-2.

21 January 2018

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Methylation protects miRNAs and siRNAs from a 3'-end uridylation activity in Arabidopsis.

21 January 2018

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Dynamic isomiR regulation in Drosophila development

21 January 2018

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Active turnover modulates mature microRNA activity in Caenorhabditis elegans

21 January 2018

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Structure of the guide-strand-containing argonaute silencing complex

21 January 2018

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Target RNA-directed trimming and tailing of small silencing RNAs

21 January 2018

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Kinetic analysis reveals the fate of a microRNA following target regulation in mammalian cells

21 January 2018

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Specific miRNA stabilization by Gld2-catalyzed monoadenylation

21 January 2018

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High-throughput assessment of microRNA activity and function using microRNA sensor and decoy libraries

21 January 2018

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Target mRNA abundance dilutes microRNA and siRNA activity

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Redefining microRNA targets

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Pten dose dictates cancer progression in the prostate

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In vivo identification of tumor- suppressive PTEN ceRNAs in an oncogenic BRAF-induced mouse model of melanoma

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Expression of versican 3'-untranslated region modulates endogenous microRNA functions

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Expression of CD44 3'-untranslated region regulates endogenous microRNA functions in tumorigenesis and angiogenesis

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An extensive microRNA-mediated network of RNA-RNA interactions regulates established oncogenic pathways in glioblastoma

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A long noncoding RNA controls muscle differentiation by functioning as a competing endogenous RNA

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Endogenous miRNA sponge lincRNA-RoR regulates Oct4, Nanog, and Sox2 in human embryonic stem cell self-renewal

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Circular RNAs are abundant, conserved, and associated with ALU repeats

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Natural RNA circles function as efficient microRNA sponges

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Circular RNAs are a large class of animal RNAs with regulatory potency

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miRNA-dependent gene silencing involving Ago2-mediated cleavage of a circular antisense RNA

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microRNAs and the immune response

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Degradation of cellular mir-27 by a novel, highly abundant viral transcript is important for efficient virus replication in vivo

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Adenovirus VA1 noncoding RNA can inhibit small interfering RNA and MicroRNA biogenesis

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Suppression of RNA interference by adenovirus virus-associated RNA.

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Sequence-specific inhibition of microRNA- and siRNA-induced RNA silencing

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Treatment of HCV infection by targeting microRNA

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MicroRNA-133 controls cardiac hypertrophy

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MicroRNA sponges: competitive inhibitors of small RNAs in mammalian cells

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Potent microRNA suppression by RNA Pol II-transcribed 'Tough Decoy' inhibitors

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Efficient sleeping beauty DNA transposition from DNA minicircles

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Long-term, efficient inhibition of microRNA function in mice using rAAV vectors

21 January 2018

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Stable knockdown of microRNA in vivo by lentiviral vectors

21 January 2018

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Sponge transgenic mouse model reveals important roles for the microRNA-183 (miR-183)/96/182 cluster in postmitotic photoreceptors of the retina

21 January 2018

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Suppression of microRNAs by dual-targeting and clustered Tough Decoy inhibitors

21 January 2018

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Vectors expressing efficient RNA decoys achieve the long-term suppression of specific microRNA activity in mammalian cells

21 January 2018

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Suppression of hepatitis C virus replicon by adenovirus vector-mediated expression of tough decoy RNA against miR-122a

21 January 2018

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Lentiviral hematopoietic stem cell gene therapy in patients with Wiskott-Aldrich syndrome.

21 January 2018

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Lentiviral hematopoietic stem cell gene therapy benefits metachromatic leukodystrophy

21 January 2018

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