Bioimage Informatics in the context of Drosophila research (Q38204607)

31 August 2017

title

Bioimage Informatics in the context of Drosophila research (English)

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31 August 2017

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Stephan Preibisch

3

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F. Jug

series ordinal

1

object named as

Jug F

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31 August 2017

2

Pietzsch T

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31 August 2017

4

Tomancak P

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31 August 2017

language of work or name

English

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publication date

13 April 2014

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31 August 2017

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31 August 2017

volume

68

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31 August 2017

issue

1

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31 August 2017

page(s)

60-73

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The genome sequence of Drosophila melanogaster

31 August 2017

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A conserved developmental patterning network produces quantitatively different output in multiple species of Drosophila

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Dissecting sources of quantitative gene expression pattern divergence between Drosophila species

7 January 2021

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7 January 2021

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Efficient reverse-engineering of a developmental gene regulatory network

7 January 2021

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Tools for neuroanatomy and neurogenetics in Drosophila

7 January 2021

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A GAL4-driver line resource for Drosophila neurobiology

7 January 2021

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A resource for manipulating gene expression and analyzing cis-regulatory modules in the Drosophila CNS.

7 January 2021

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A survey of 6,300 genomic fragments for cis-regulatory activity in the imaginal discs of Drosophila melanogaster

7 January 2021

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BrainAligner: 3D registration atlases of Drosophila brains

7 January 2021

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The Virtual Insect Brain protocol: creating and comparing standardized neuroanatomy

7 January 2021

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Identifying neuronal lineages of Drosophila by sequence analysis of axon tracts

7 January 2021

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Globally optimal stitching of tiled 3D microscopic image acquisitions

7 January 2021

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Fiji: an open-source platform for biological-image analysis

7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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Distinctive Image Features from Scale-Invariant Keypoints

7 January 2021

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As-rigid-as-possible mosaicking and serial section registration of large ssTEM datasets

7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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Array tomography: a new tool for imaging the molecular architecture and ultrastructure of neural circuits

7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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Software for bead-based registration of selective plane illumination microscopy data

7 January 2021

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Multi-view image fusion improves resolution in three-dimensional microscopy.

7 January 2021

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Reconstruction of zebrafish early embryonic development by scanned light sheet microscopy

7 January 2021

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Wavelet-based image fusion in multi-view three-dimensional microscopy

7 January 2021

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High-resolution three-dimensional imaging of large specimens with light sheet-based microscopy.

7 January 2021

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Maximum likelihood reconstruction for emission tomography

7 January 2021

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Multiview deblurring for 3-D images from light-sheet-based fluorescence microscopy.

7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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CATMAID: collaborative annotation toolkit for massive amounts of image data

7 January 2021

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Mechanical control of morphogenesis by Fat/Dachsous/Four-jointed planar cell polarity pathway

7 January 2021

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Towards semi-automatic reconstruction of neural circuits

7 January 2021

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Neuron geometry extraction by perceptual grouping in ssTEM images

7 January 2021

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Feature Detection with Automatic Scale Selection

7 January 2021

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In vivo modulation of morphogenetic movements in Drosophila embryos with femtosecond laser pulses.

7 January 2021

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Survey over image thresholding techniques and quantitative performance evaluation

7 January 2021

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An experimental comparison of min-cut/max-flow algorithms for energy minimization in vision.

7 January 2021

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Snakes: Active contour models

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

Fronts propagating with curvature-dependent speed: Algorithms based on Hamilton-Jacobi formulations

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

Segmenting and tracking fluorescent cells in dynamic 3-D microscopy with coupled active surfaces.

7 January 2021

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Identifying Important Risk Factors for Survival in Kidney Graft Failure Patients Using Random Survival Forests

7 January 2021

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Ilastik: Interactive learning and segmentation toolkit

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

Objective comparison of particle tracking methods

7 January 2021

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A New Approach to Linear Filtering and Prediction Problems

7 January 2021

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Deterministic and probabilistic approaches for tracking virus particles in time-lapse fluorescence microscopy image sequences.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

Multiple Hypothesis Tracking for Cluttered Biological Image Sequences

7 January 2021

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7 January 2021

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

inferred from DOI database lookup

7 January 2021

based on heuristic

Robust single-particle tracking in live-cell time-lapse sequences

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

Coupled minimum-cost flow cell tracking for high-throughput quantitative analysis

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

Cell population tracking and lineage construction with spatiotemporal context

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

Cell flow reorients the axis of planar polarity in the wing epithelium of Drosophila.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

The case for open computer programs

7 January 2021

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Research priorities. Shining light into black boxes

7 January 2021

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Current challenges in open-source bioimage informatics.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

Biological imaging software tools

7 January 2021

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BioImageXD: an open, general-purpose and high-throughput image-processing platform.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

Endrov: an integrated platform for image analysis

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

EBImage--an R package for image processing with applications to cellular phenotypes.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

CellProfiler: image analysis software for identifying and quantifying cell phenotypes

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

NIH Image to ImageJ: 25 years of image analysis

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

MosaicIA: an ImageJ/Fiji plugin for spatial pattern and interaction analysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

A 3D digital atlas of C. elegans and its application to single-cell analyses

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

Extensible visualization and analysis for multidimensional images using Vaa3D.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

Automatic 3D neuron tracing using all-path pruning

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

A call for bioimaging software usability

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

A cross disciplinary study of link decay and the effectiveness of mitigation techniques

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

KNIME - the Konstanz information miner: version 2.0 and beyond

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

Why bioimage informatics matters

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

Metadata matters: access to image data in the real world

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

ImgLib2--generic image processing in Java

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

Computerized video analysis of social interactions in mice.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

ViBE-Z: a framework for 3D virtual colocalization analysis in zebrafish larval brains.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

Profiling by image registration reveals common origin of annelid mushroom bodies and vertebrate pallium

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

Distribution, classification, and development ofDrosophila glial cells in the late embryonic and early larval ventral nerve cord.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.04.004

10.1016/J.YMETH.2014.04.004

7 January 2021

Identifiers

DOI

1 reference

31 August 2017

1 reference