ATP-dependent allosteric DNA enzymes (Q38289713)

1 September 2017

ATP-dependent allosteric DNA enzymes (English)

1 reference

1 September 2017

Matthew Levy

1

1 reference

PubMed ID

11983331

1 September 2017

Andrew D Ellington

series ordinal

2

1 reference

1 September 2017

1 April 2002

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1 September 2017

Chemistry and Biology

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1 September 2017

9

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1 September 2017

4

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1 September 2017

417-426

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Crystal structure of a group I ribozyme domain: principles of RNA packing

1 September 2017

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Structure-function relationships of hammerhead ribozymes: from understanding to applications.

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Deoxyribozymes: new players in the ancient game of biocatalysis

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

A DNA enzyme that cleaves RNA

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

In vitro selection of self-cleaving DNAs

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Evidence for the metal-cofactor independence of an RNA phosphodiester-cleaving DNA enzyme

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Characterization and divalent metal-ion dependence of in vitro selected deoxyribozymes which cleave DNA/RNA chimeric oligonucleotides

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

A DNA metalloenzyme with DNA ligase activity

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Phosphorylating DNA with DNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Capping DNA with DNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Rational design of allosteric ribozymes

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Engineering precision RNA molecular switches

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Design and optimization of effector-activated ribozyme ligases

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

In vitro selection of allosteric ribozymes: theory and experimental validation

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

An allosteric hammerhead ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

In vitro selection of an allosteric ribozyme that transduces analytes to amplicons

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Construction of new ribozymes requiring short regulator oligonucleotides as a cofactor

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

In vitro selection of nucleoprotein enzymes

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Mechanism for allosteric inhibition of an ATP-sensitive ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Chemical and enzymatic probing of effector-mediated changes in the conformation of a maxizyme

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

A novel allosterically trans-activated ribozyme, the maxizyme, with exceptional specificity in vitro and in vivo

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Nucleic acid molecular switches

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

An amino acid as a cofactor for a catalytic polynucleotide

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

A general purpose RNA-cleaving DNA enzyme

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

A novel mode of regulation of an RNA-cleaving DNAzyme by effectors that bind to both enzyme and substrate

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

In vitro selection of a deoxyribozyme that can utilize multiple substrates

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Selection of deoxyribozyme ligases that catalyze the formation of an unnatural internucleotide linkage

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

A Novel 5'-Iodonucleoside Allows Efficient Nonenzymatic Ligation of Single-stranded and Duplex DNAs

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Structural basis of DNA folding and recognition in an AMP-DNA aptamer complex: distinct architectures but common recognition motifs for DNA and RNA aptamers complexed to AMP

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

High sequence fidelity in a non-enzymatic DNA autoligation reaction

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Stability and structure of three-way DNA junctions containing unpaired nucleotides

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Conformational flexibility of three-way DNA junctions containing unpaired nucleotides.

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Solution structure of a DNA three-way junction containing two unpaired thymidine bases. Identification of sequence features that decide conformer selection

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Structural features of a three-stranded DNA junction containing a C-C junctional bulge

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Conformational differences between bulged pyrimidines (C-C) and purines (A-A, I-I) at the branch point of three-stranded DNA junctions

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Design of allosteric hammerhead ribozymes activated by ligand-induced structure stabilization

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

A DNA aptamer that binds adenosine and ATP.

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Allosteric regulation of a ribozyme activity through ligand-induced conformational change

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Allosteric selection of ribozymes that respond to the second messengers cGMP and cAMP.

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Quantitative analysis of receptors for adenosine nucleotides obtained via in vitro selection from a library incorporating a cationic nucleotide analog

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Altering molecular recognition of RNA aptamers by allosteric selection.

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Cooperative binding of effectors by an allosteric ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Channeling of substrates and intermediates in enzyme-catalyzed reactions

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

HIV-1 Rev regulation involves recognition of non-Watson-Crick base pairs in viral RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

High-resolution mapping of the human T-cell leukemia virus type 1 Rex-binding element by in vitro selection.

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

The secondary structure and sequence optimization of an RNA ligase ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Optimization and optimality of a short ribozyme ligase that joins non-Watson-Crick base pairings

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Directed evolution of a fungal peroxidase

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Directed evolution of beta -glucosidase A from Paenibacillus polymyxa to thermal resistance

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

The determinants of alpha-amylase pH-activity profiles.

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Novel and variant ribozymes obtained through in vitro selection

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

In vitro selection of functional nucleic acids

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Evolution of DNA and RNA as catalysts for chemical reactions

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Immobilized RNA switches for the analysis of complex chemical and biological mixtures

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

Training ribozymes to switch

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2802%2900123-0

7 January 2021

10.1016/S1074-5521(02)00123-0

Identifiers

DOI

1 reference

1 September 2017

1 reference

PubMed ID

11983331