The Escherichia coli RutR transcription factor binds at targets within genes as well as intergenic regions. (Q38290447)

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8 January 2020

title

The Escherichia coli RutR transcription factor binds at targets within genes as well as intergenic regions (English)

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8 January 2020

0 references

1

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8 January 2020

Stephen Busby

series ordinal

3

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8 January 2020

David C Grainger

series ordinal

4

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8 January 2020

author name string

Akira Ishihama

series ordinal

2

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8 January 2020

language of work or name

English

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publication date

30 May 2008

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8 January 2020

published in

Nucleic Acids Research

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8 January 2020

volume

36

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8 January 2020

issue

12

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8 January 2020

page(s)

3950-3955

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Genome-wide identification of binding sites for the nitric oxide-sensitive transcriptional regulator NsrR.

8 January 2020

cites work

1 reference

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Genome-wide analysis of Fis binding in Escherichia coli indicates a causative role for A-/AT-tracts

6 September 2017

1 reference

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RutR is the uracil/thymine-sensing master regulator of a set of genes for synthesis and degradation of pyrimidines.

6 September 2017

1 reference

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Comparative analysis of regulatory motif discovery tools for transcription factor binding sites

6 September 2017

1 reference

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Genomic analysis of protein-DNA interactions in bacteria: insights into transcription and chromosome organization

6 September 2017

1 reference

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Transcription factor distribution in Escherichia coli: studies with FNR protein.

6 September 2017

1 reference

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Association of nucleoid proteins with coding and non-coding segments of the Escherichia coli genome.

6 September 2017

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Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

6 September 2017

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A previously undescribed pathway for pyrimidine catabolism

6 September 2017

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Studies of the distribution of Escherichia coli cAMP-receptor protein and RNA polymerase along the E. coli chromosome.

6 September 2017

1 reference

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Genomic analysis of LexA binding reveals the permissive nature of the Escherichia coli genome and identifies unconventional target sites

6 September 2017

1 reference

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Genomic studies with Escherichia coli MelR protein: applications of chromatin immunoprecipitation and microarrays.

6 September 2017

1 reference

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In silico representation and discovery of transcription factor binding sites

6 September 2017

1 reference

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The regulation of bacterial transcription initiation

6 September 2017

1 reference

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Identifying global regulators in transcriptional regulatory networks in bacteria

6 September 2017

1 reference

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Identification of the binding sites of regulatory proteins in bacterial genomes

6 September 2017

1 reference

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One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

6 September 2017

1 reference

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A comprehensive library of DNA-binding site matrices for 55 proteins applied to the complete Escherichia coli K-12 genome

6 September 2017

1 reference

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Evolution of transcription factors and the gene regulatory network in Escherichia coli

6 September 2017

1 reference

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PREDetector: a new tool to identify regulatory elements in bacterial genomes.

14 September 2017

1 reference

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Functional determinants of transcription factors in Escherichia coli: protein families and binding sites

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2475637

31 August 2018

Identifiers

DOI

10.1093/NAR/GKN339

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18515344%20AND%20SRC:MED&resulttype=core&format=json

8 January 2020

1 reference

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8 January 2020

PubMed publication ID

18515344

1 reference