A pattern recognition approach to infer time-lagged genetic interactions (Q38292743)

1 September 2017

A pattern recognition approach to infer time-lagged genetic interactions (English)

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1 September 2017

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Cheng-Long Chuang

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1 September 2017

Chih-Hung Jen

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2

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1 September 2017

Chung-Ming Chen

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3

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1 September 2017

Grace S Shieh

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4

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1 September 2017

language of work or name

English

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publication date

12 March 2008

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24

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9

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1183-1190

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Revising regulatory networks: from expression data to linear causal models

1 September 2017

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Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map

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CCR4 is a glucose-regulated transcription factor whose leucine-rich repeat binds several proteins important for placing CCR4 in its proper promoter context

21 January 2018

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Alternate pathways involving Sgs1/Top3, Mus81/ Mms4, and Srs2 prevent formation of toxic recombination intermediates from single-stranded gaps created by DNA replication

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Slx1-Slx4 is a second structure-specific endonuclease functionally redundant with Sgs1-Top3.

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Inferring cellular networks using probabilistic graphical models

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Principles for the buffering of genetic variation

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A gene network for navigating the literature

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Sensitivity and specificity of inferring genetic regulatory interactions from microarray experiments with dynamic Bayesian networks

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Transcription control reprogramming in genetic backup circuits

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Brc1-mediated rescue of Smc5/6 deficiency: requirement for multiple nucleases and a novel Rad18 function

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Inferring transcriptional modules from ChIP-chip, motif and microarray data

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Analysis of beta-1,3-glucan assembly in Saccharomyces cerevisiae using a synthetic interaction network and altered sensitivity to caspofungin

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Sgs1 regulates gene conversion tract lengths and crossovers independently of its helicase activity

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MIPS: a database for genomes and protein sequences.

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Involvement of SGS1 in DNA damage-induced heteroallelic recombination that requires RAD52 in Saccharomyces cerevisiae

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DNA helicase gene interaction network defined using synthetic lethality analyzed by microarray

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A DNA integrity network in the yeast Saccharomyces cerevisiae

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Beyond synexpression relationships: local clustering of time-shifted and inverted gene expression profiles identifies new, biologically relevant interactions.

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An empirical Bayes approach to inferring large-scale gene association networks.

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Requirement of Rrm3 helicase for repair of spontaneous DNA lesions in cells lacking Srs2 or Sgs1 helicase

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Elucidation of gene interaction networks through time-lagged correlation analysis of transcriptional data

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Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization

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Inference of a genetic network by a combined approach of cluster analysis and graphical Gaussian modeling.

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System for automatically inferring a genetic netwerk from expression profiles

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Systematic genetic analysis with ordered arrays of yeast deletion mutants

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Global mapping of the yeast genetic interaction network

21 January 2018

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Statistical methods for identifying yeast cell cycle transcription factors

21 January 2018

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Method for identifying transcription factor binding sites in yeast

21 January 2018

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Transcriptional compensation for gene loss plays a minor role in maintaining genetic robustness in Saccharomyces cerevisiae

21 January 2018

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Mrc1 is required for sister chromatid cohesion to aid in recombination repair of spontaneous damage

21 January 2018

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Discovering functional relationships: biochemistry versus genetics

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10.1093/BIOINFORMATICS/BTN098

21 January 2018

Identifiers

DOI

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journals/bioinformatics/ChuangJCS08

1 September 2017

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DBLP Dataset 2021-01-02

28 January 2021

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