Different pathways to acquiring resistance genes illustrated by the recent evolution of IncW plasmids. (Q38293591)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18268088%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

title

Different pathways to acquiring resistance genes illustrated by the recent evolution of IncW plasmids (English)

1 reference

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2 January 2020

8

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2 January 2020

María P Garcillán-Barcia

2

1 reference

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2 January 2020

Raul Fernández-López

3

1 reference

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2 January 2020

Nicholas Thomson

4

1 reference

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2 January 2020

author name string

Carlos Revilla

1

1 reference

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2 January 2020

Mandy Sanders

5

1 reference

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2 January 2020

Martin Cheung

6

1 reference

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2 January 2020

Christopher M Thomas

7

1 reference

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2 January 2020

language of work or name

English

0 references

publication date

11 February 2008

1 reference

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Antimicrobial Agents and Chemotherapy

2 January 2020

published in

1 reference

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2 January 2020

volume

52

1 reference

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2 January 2020

issue

4

1 reference

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2 January 2020

page(s)

1472-1480

1 reference

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Dynamics of the IncW genetic backbone imply general trends in conjugative plasmid evolution.

2 January 2020

cites work

1 reference

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ISCR elements: novel gene-capturing systems of the 21st century?

6 September 2017

1 reference

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Bacteriophage replication modules

6 September 2017

1 reference

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Mobile genetic elements: the agents of open source evolution

6 September 2017

1 reference

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The evolution of pTF-FC2 and pTC-F14, two related plasmids of the IncQ-family.

6 September 2017

1 reference

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A classification scheme for mobilization regions of bacterial plasmids.

6 September 2017

1 reference

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Spread and survival of promiscuous IncP-1 plasmids

6 September 2017

1 reference

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Comparative biology of IncQ and IncQ-like plasmids

6 September 2017

1 reference

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Lateral and oblique gene transfer

6 September 2017

1 reference

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Antibiotic resistance in microbes

6 September 2017

1 reference

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Mosaic plasmids and mosaic replicons: evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons

6 September 2017

1 reference

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Paradigms of plasmid organization

6 September 2017

1 reference

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Horizontal gene transfer and the origin of species: lessons from bacteria.

6 September 2017

1 reference

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Transposon Tn21, flagship of the floating genome

6 September 2017

1 reference

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pSa causes oncogenic suppression of Agrobacterium by inhibiting VirE2 protein export

6 September 2017

1 reference

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

6 September 2017

1 reference

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Detection and characterization of broad-host-range plasmids in environmental bacteria by PCR.

6 September 2017

1 reference

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A method for estimating the numbers of synonymous and nonsynonymous substitutions per site

6 September 2017

1 reference

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Integrons found in different locations have identical 5' ends but variable 3' ends

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Expression of antibiotic resistance genes in the integrated cassettes of integrons

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Transduction of Various R Factors by Phage P1 inEscherichia coliand by Phage P22 inSalmonella typhimurium

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Identification and classification of bacterial plasmids

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Partition-mediated incompatibility of bacterial plasmids

6 September 2017

1 reference

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Differential plasmid rescue from transgenic mouse DNAs into Escherichia coli methylation-restriction mutants

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

The osa gene of pSa encodes a 21.1-kilodalton protein that suppresses Agrobacterium tumefaciens oncogenicity

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Site-specific insertion of genes into integrons: role of the 59-base element and determination of the recombination cross-over point

6 September 2017

1 reference

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Reconstruction of an active integron recombination site after integration of a gene cassette at a secondary site.

6 September 2017

1 reference

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Replication and control of circular bacterial plasmids.

6 September 2017

1 reference

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6 September 2017

Plasmid incompatibility.

1 reference

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Nucleotide sequence analysis of a transposon (Tn5393) carrying streptomycin resistance genes in Erwinia amylovora and other gram-negative bacteria

14 September 2017

1 reference

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Revised analysis of aadA2 gene of plasmid pSa

14 September 2017

1 reference

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Detailed restriction enzyme map of crown gall-suppressive IncW plasmid pSa, showing ends of deletion causing chloramphenicol sensitivity

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Genetic and molecular characterization of Tn21, a multiple resistance transposon from R100.1

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Characterization of a R plasmid-associated, trimethoprim-resistant dihydrofolate reductase and determination of the nucleotide sequence of the reductase gene

14 September 2017

1 reference

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Junction sequences generated by 'one-ended transposition'.

14 September 2017

1 reference

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Analysis of the variable endpoints generated by one-ended transposition of Tn21.

14 September 2017

1 reference

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Gene cassettes: a new class of mobile element

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Electron microscope heteroduplex studies of sequence relationships among plasmids of the W incompatibility group

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Manure Enhances Plasmid Mobilization and Survival of Pseudomonas putida Introduced into Field Soil

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Agrobacterium tumefaciens oncogenic suppressors inhibit T-DNA and VirE2 protein substrate binding to the VirD4 coupling protein

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

The complete nucleotide sequence of the resistance plasmid R478: defining the backbone components of incompatibility group H conjugative plasmids through comparative genomics

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Molecular analysis of florfenicol-resistant Escherichia coli isolates from pigs

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

The 64 508 bp IncP-1β antibiotic multiresistance plasmid pB10 isolated from a waste-water treatment plant provides evidence for recombination between members of different branches of the IncP-1β group

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Complete sequence of the IncPbeta plasmid R751: implications for evolution and organisation of the IncP backbone

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

oriT-processing and regulatory roles of TrwA protein in plasmid R388 conjugation.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

The partial 3'-conserved segment duplications in the integrons In6 from pSa and In7 from pDGO100 have a common origin

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Complete nucleotide sequence of Birmingham IncP alpha plasmids. Compilation and comparative analysis

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

DNA sequence of direct repeats of the sulI gene of plasmid pSa.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Isolation of the origin of replication of the IncW-group plasmid pSa

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Replicon fusion mediated by a single-ended derivative of transposon Tn1721

23 June 2018

1 reference

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R Factors from Proteus rettgeri

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Trimethoprim resistance conferred by W plasmids in Enterobacteriaceae

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Site-specific recombination promotes linkage between trimethoprim- and sulfonamide resistance genes. Sequence characterization of dhfrV and sulI and a recombination active locus of Tn21.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

One-kilobase direct repeats of plasmid pSa.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

The aminoglycoside-resistance operon of the plasmid pSa: nucleotide sequence of the streptomycin-spectinomycin resistance gene.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Structural and functional analysis of the origin of conjugal transfer of the broad-host-range IncW plasmid R388 and comparison with the related IncN plasmid R46.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Sequences of the genes blaT-1B and blaT-2

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

A gene near the plasmid pSa origin of replication encodes a nuclease

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Complete nucleotide sequence of Tn1721: gene organization and a novel gene product with features of a chemotaxis protein

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Manure and sulfadiazine synergistically increased bacterial antibiotic resistance in soil over at least two months

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Impact of conjugal transfer on the stability of IncP-1 plasmid pKJK5 in bacterial populations.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Partition-associated incompatibility caused by random assortment of pure plasmid clusters.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Evolution of transposons containing blaTEM genes

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

The complete sequences of plasmids pB2 and pB3 provide evidence for a recent ancestor of the IncP-1beta group without any accessory genes

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Antirestriction protein Ard (Type C) encoded by IncW plasmid pSa has a high similarity to the "protein transport" domain of TraC1 primase of promiscuous plasmid RP4.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Mosaic structure of plasmids from natural populations of Escherichia coli.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Secondary-sites for integration mediated by the Tn21 integrase.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

DNA sequence of a plasmid-encoded dihydrofolate reductase

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

P1 plasmid replication: replicon structure

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Common regions e.g. orf513 and antibiotic resistance: IS91-like elements evolving complex class 1 integrons

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292564

Plasmids containing one inverted repeat of Tn21 can fuse with other plasmids in the presence of Tn21 transposase

3 December 2018

1 reference

12 December 2020

Physical and genetic analysis of the Inc-W group plasmids R388, Sa, and R7K

1 reference

12 December 2020

The copy number of plasmid pLS1 is regulated by two trans-acting plasmid products: the antisense RNA II and the repressor protein, RepA

1 reference

12 December 2020

K-Estimator: calculation of the number of nucleotide substitutions per site and the confidence intervals

1 reference

12 December 2020

Physical and genetic map of the IncW plasmid R388

1 reference

12 December 2020

IHF protein inhibits cleavage but not assembly of plasmid R388 relaxosomes

1 reference

12 December 2020

DNA binding properties of protein TrwA, a possible structural variant of the Arc repressor superfamily

1 reference

12 December 2020

Plasmid fusions mediated by one end of TnA

1 reference

12 December 2020

Identifiers

DOI

10.1128/AAC.00982-07

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18268088%20AND%20SRC:MED&resulttype=core&format=json

release_5lpbk26qtja2ff2d4fhjdyqsqq

2 January 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/5lpbk26qtja2ff2d4fhjdyqsqq

24 November 2022

mapped directly with Wikidata item

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18268088%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

PubMed publication ID

18268088

1 reference