Selectivity and affinity of triplex-forming oligonucleotides containing 2'-aminoethoxy-5-(3-aminoprop-1-ynyl)uridine for recognizing AT base pairs in duplex DNA. (Q38337572)

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English	Selectivity and affinity of triplex-forming oligonucleotides containing 2'-aminoethoxy-5-(3-aminoprop-1-ynyl)uridine for recognizing AT base pairs in duplex DNA.	scientific article

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Selectivity and affinity of triplex-forming oligonucleotides containing 2'-aminoethoxy-5-(3-aminoprop-1-ynyl)uridine for recognizing AT base pairs in duplex DNA. (English)

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

author name string

Sadie D Osborne

1

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Vicki E C Powers

2

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

David A Rusling

3

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Oliver Lack

4

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Keith R Fox

5

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Europe PubMed Central

PMC publication ID

2 September 2017

Tom Brown

6

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Europe PubMed Central

PMC publication ID

2 September 2017

language of work or name

0 references

publication date

18 August 2004

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Nucleic Acids Research

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Europe PubMed Central

PMC publication ID

2 September 2017

32

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Europe PubMed Central

PMC publication ID

2 September 2017

15

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

4439-4447

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

describes a project that uses

1 reference

Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC516051/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

Oligo-2'-deoxyribonucleotides containing uracil modified at the 5-position with linkers ending with guanidinium groups.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

6 September 2017

High throughput measurement of duplex, triplex and quadruplex melting curves using molecular beacons and a LightCycler

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

6 September 2017

Directed gene modification via triple helix formation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

6 September 2017

Triplex forming oligonucleotides: sequence-specific tools for gene targeting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

6 September 2017

Triple helix formation and the antigene strategy for sequence-specific control of gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

6 September 2017

Targeting DNA with triplexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

6 September 2017

Simplified sample preparation for the analysis of oligonucleotides by matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

6 September 2017

Towards mixed sequence recognition by triple helix formation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

6 September 2017

Relative stability of triplexes containing different numbers of T.AT and C+.GC triplets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

6 September 2017

Triplex formation at physiological pH: comparative studies on DNA triplexes containing 5-Me-dC tethered at N4 with spermine and tetraethyleneoxyamine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

6 September 2017

Triplex DNA: fundamentals, advances, and potential applications for gene therapy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

6 September 2017

Investigation of the structural basis for thermodynamic stabilities of tandem GU mismatches: solution structure of (rGAGGUCUC)2 by two-dimensional NMR and simulated annealing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

6 September 2017

Prediction of the stability of DNA triplexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

6 September 2017

Electrostatic effects in DNA triple helices.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

6 September 2017

A comparison of the circular dichroism spectra of synthetic DNA sequences of the homopurine homopyrimidine and mixed purine- pyrunidine types

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

6 September 2017

5-(1-propargylamino)-2'-deoxyuridine (UP): a novel thymidine analogue for generating DNA triplexes with increased stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

14 September 2017

Thermodynamic and kinetic stability of intermolecular triple helices containing different proportions of C+·GC and T·AT triplets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

14 September 2017

Triplex-directed modification of genes and gene activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

23 June 2018

Recent developments in triple-helix regulation of gene expression.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

23 June 2018

Free energy of imperfect nucleic acid helices. 3. Small internal loops resulting from mismatches.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

23 June 2018

Stable DNA triple helix formation using oligonucleotides containing 2'-aminoethoxy,5-propargylamino-U.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516051

31 August 2018

Energetic contributions for the formation of TAT/TAT, TAT/CGC(+), and CGC(+)/CGC(+) base triplet stacks

1 reference

https://pubmed.ncbi.nlm.nih.gov/15317869

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Polyamines favor DNA triplex formation at neutral pH

1 reference

https://pubmed.ncbi.nlm.nih.gov/15317869

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dual Recognition of Double-Stranded DNA by 2'-Aminoethoxy-Modified Oligonucleotides

1 reference

https://pubmed.ncbi.nlm.nih.gov/15317869

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Absorption and circular dichroism spectroscopy of nucleic acid duplexes and triplexes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15317869

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Selectivity of polyamines in triplex DNA stabilization

1 reference

https://pubmed.ncbi.nlm.nih.gov/15317869

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The contribution of cytosine protonation to the stability of parallel DNA triple helices

1 reference

https://pubmed.ncbi.nlm.nih.gov/15317869

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Triple-helix formation at different positions on nucleosomal DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/15317869

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dual recognition of double-stranded DNA by 2'-aminoethoxy-modified oligonucleotides: the solution structure of an intramolecular triplex obtained by NMR spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/15317869

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKH776

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

ResearchGate publication ID

0 references

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