Artificial neural network prediction of antisense oligodeoxynucleotide activity (Q38362285)

2 September 2017

Artificial neural network prediction of antisense oligodeoxynucleotide activity (English)

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artificial neural network

2 September 2017

1 reference

Michael C Giddings

1

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2 September 2017

Atul A Shah

2

1 reference

2 September 2017

Sue Freier

3

1 reference

2 September 2017

John F Atkins

4

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2 September 2017

Raymond F Gesteland

5

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2 September 2017

Olga V Matveeva

6

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2 September 2017

language of work or name

English

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publication date

1 October 2002

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2 September 2017

Nucleic Acids Research

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2 September 2017

30

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2 September 2017

19

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2 September 2017

4295-4304

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Identification of sequence motifs in oligonucleotides whose presence is correlated with antisense activity

2 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140555

Prediction of antisense oligonucleotide binding affinity to a structured RNA target

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140555

Myb targeted therapeutics for the treatment of human malignancies

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140555

Potent antisense oligonucleotides to the human multidrug resistance-1 mRNA are rationally selected by mapping RNA-accessible sites with oligonucleotide libraries

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140555

Inhibition of endothelial cell adhesion molecule expression with antisense oligonucleotides.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140555

Identification of common molecular subsequences

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140555

The meaning and use of the area under a receiver operating characteristic (ROC) curve

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140555

Comparison of the predicted and observed secondary structure of T4 phage lysozyme

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140555

A theoretical approach to select effective antisense oligodeoxyribonucleotides at high statistical probability

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140555

Predicting antisense oligonucleotide inhibitory efficacy: a computational approach using histograms and thermodynamic indices

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140555

Keeping the biotechnology of antisense in context.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140555

Inhibition of replication of drug-resistant HIV type 1 isolates by polypurine tract-specific oligodeoxynucleotide TFO A.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140555

A good antisense molecule is hard to find

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140555

Discovering antisense reagents by hybridization of RNA to oligonucleotide arrays

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140555

Antisense oligonucleotides inhibit intercellular adhesion molecule 1 expression by two distinct mechanisms

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140555

ODNBase--a web database for antisense oligonucleotide effectiveness studies. Oligodeoxynucleotides

23 June 2018

1 reference

12 December 2020

Variations in mRNA content have no effect on the potency of antisense oligonucleotides

1 reference

12 December 2020

Thermodynamic parameters to predict stability of RNA/DNA hybrid duplexes

1 reference

12 December 2020

Tetranucleotide GGGA motif in primary RNA transcripts. Novel target site for antisense design

1 reference

12 December 2020

Prediction of antisense oligonucleotide efficacy by in vitro methods

1 reference

12 December 2020

Antitumor activity of a C-raf antisense oligonucleotide in combination with standard chemotherapeutic agents against various human tumors transplanted subcutaneously into nude mice

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKF557

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2 September 2017

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2 September 2017

PubMed publication ID

12364609

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