The institute for genomic research Osa1 rice genome annotation database (Q38520454)

3 September 2017

The institute for genomic research Osa1 rice genome annotation database (English)

1 reference

3 September 2017

0 references

1 reference

11

1 reference

3 September 2017

John Hamilton

7

0 references

Razvan Sultana

9

object named as

Razvan Sultana

1 reference

3 September 2017

Qiaoping Yuan

1

1 reference

3 September 2017

Shu Ouyang

2

1 reference

3 September 2017

Aihui Wang

3

1 reference

3 September 2017

Wei Zhu

4

1 reference

3 September 2017

Rama Maiti

5

1 reference

3 September 2017

Haining Lin

6

1 reference

3 September 2017

Brian Haas

8

1 reference

3 September 2017

Foo Cheung

10

1 reference

3 September 2017

C Robin Buell

12

1 reference

3 September 2017

language of work or name

English

0 references

publication date

1 May 2005

1 reference

3 September 2017

1 reference

3 September 2017

138

1 reference

3 September 2017

1

1 reference

3 September 2017

18-26

1 reference

A chromosome bin map of 16,000 expressed sequence tag loci and distribution of genes among the three genomes of polyploid wheat.

3 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

Pack-MULE transposable elements mediate gene evolution in plants

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

High throughput T-DNA insertion mutagenesis in rice: a first step towards in silico reverse genetics.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

Rapid, large-scale generation of Ds transposant lines and analysis of the Ds insertion sites in rice.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

Transposable element annotation of the rice genome

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

The TIGR Plant Repeat Databases: a collective resource for the identification of repetitive sequences in plants

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

Target site specificity of the Tos17 retrotransposon shows a preference for insertion within genes and against insertion in retrotransposon-rich regions of the genome.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

The InterPro database, 2003 brings increased coverage and new features

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

The TIGR rice genome annotation resource: annotating the rice genome and creating resources for plant biologists

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

The generic genome browser: a building block for a model organism system database

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica)

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

BLAT—The BLAST-Like Alignment Tool

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

A comprehensive rice transcript map containing 6591 expressed sequence tag sites

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

The Pfam protein families database

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

The distributed annotation system

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

InterProScan--an integration platform for the signature-recognition methods in InterPro

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

Early and multiple Ac transpositions in rice suitable for efficient insertional mutagenesis.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

GeneSplicer: a new computational method for splice site prediction

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

The TIGR Gene Indices: analysis of gene transcript sequences in highly sampled eukaryotic species

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

Gene ontology: tool for the unification of biology

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

Ab initio gene finding in Drosophila genomic DNA

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

International Rice Genome Sequencing Project: the effort to completely sequence the rice genome

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

Comparative genetics in the grasses

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

A high-density rice genetic linkage map with 2275 markers using a single F2 population.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

GeneMark.hmm: new solutions for gene finding

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

A tool for analyzing and annotating genomic sequences

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

Prediction of complete gene structures in human genomic DNA

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

Saturated molecular map of the rice genome based on an interspecific backcross population

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

Annotation of the Arabidopsis genome

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1104156

The use of the Monsanto draft rice genome sequence in research

1 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15888674

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1104/PP.104.059063

1 reference

release_sbvxbr3vhndapmr6giqloe5usy

3 September 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/sbvxbr3vhndapmr6giqloe5usy

mapped directly with Wikidata item

24 November 2022

based on heuristic

0 references

1 reference